RNA–Protein interactions for RNA: ENSMUST00000193839.5

Pcdha1-202, Transcript of Protocadherin alpha 1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Pcdha1, Length 4,925 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha1-202ENSMUST00000193839 Zcchc13Q9D548 170 aa8.9□□□□□ -0.98
Pcdha1-202ENSMUST00000193839 Gm12216A0A1W2P827 62 aa8.89□□□□□ -0.99
Pcdha1-202ENSMUST00000193839 Wdfy4E9Q2M9 3149 aa8.88□□□□□ -0.99
Pcdha1-202ENSMUST00000193839 Gm7137J3QMW1 236 aa8.88□□□□□ -0.99
Pcdha1-202ENSMUST00000193839 Defb9Q8R2I6 67 aa8.88□□□□□ -0.99
Pcdha1-202ENSMUST00000193839 Igsf10Q3V1M1 2594 aa8.88□□□□□ -0.99
Pcdha1-202ENSMUST00000193839 Ranbp2Q9ERU9 3053 aaKnown RBP8.87□□□□□ -0.99
Pcdha1-202ENSMUST00000193839 Fam104aA2A6P4 185 aa8.86□□□□□ -0.99
Pcdha1-202ENSMUST00000193839 Plac8Q9JI48 112 aa8.86□□□□□ -0.99
Pcdha1-202ENSMUST00000193839 Gm17606F6ZL36 78 aa8.85□□□□□ -0.99
Pcdha1-202ENSMUST00000193839 Chtf8P0CG14 533 aa8.85□□□□□ -0.99
Pcdha1-202ENSMUST00000193839 Spaca4Q80ZQ0 127 aa8.85□□□□□ -0.99
Pcdha1-202ENSMUST00000193839 Unc80Q8BLN6 3261 aa8.84□□□□□ -0.99
Pcdha1-202ENSMUST00000193839 Tep1P97499 2629 aa8.81□□□□□ -1
Pcdha1-202ENSMUST00000193839 Gm10065F6TJM2 114 aa8.8□□□□□ -1
Pcdha1-202ENSMUST00000193839 RetnlbQ99P86 105 aa8.79□□□□□ -1
Pcdha1-202ENSMUST00000193839 Ubr5Q80TP3 2792 aa8.79□□□□□ -1
Pcdha1-202ENSMUST00000193839 Chd6A3KFM7 2711 aa8.79□□□□□ -1
Pcdha1-202ENSMUST00000193839 SmcpP15265 143 aa8.79□□□□□ -1
Pcdha1-202ENSMUST00000193839 Cystm1Q8K353 104 aa8.78□□□□□ -1
Pcdha1-202ENSMUST00000193839 Q8BGJ3 129 aa8.78□□□□□ -1
Pcdha1-202ENSMUST00000193839 Kmt2bO08550 2713 aa8.77□□□□□ -1
Pcdha1-202ENSMUST00000193839 Gm36176A0A1W2P8D5 158 aa8.77□□□□□ -1
Pcdha1-202ENSMUST00000193839 Gm10320E9PW43 113 aa8.75□□□□□ -1.01
Pcdha1-202ENSMUST00000193839 Gm17349F7BGH6 99 aa8.74□□□□□ -1.01
Pcdha1-202ENSMUST00000193839 NbeaQ9EPN1 2936 aa8.74□□□□□ -1.01
Pcdha1-202ENSMUST00000193839 Col6a5A6H584 2640 aa8.73□□□□□ -1.01
Pcdha1-202ENSMUST00000193839 FrylF8VQ05 3007 aa8.73□□□□□ -1.01
Pcdha1-202ENSMUST00000193839 FryE9Q8I9 3020 aa8.71□□□□□ -1.01
Pcdha1-202ENSMUST00000193839 Cypt15B1AXS0 87 aa8.71□□□□□ -1.01
Pcdha1-202ENSMUST00000193839 BptfA2A654 3036 aaKnown RBP8.71□□□□□ -1.01
Pcdha1-202ENSMUST00000193839 Lama1P19137 3084 aa8.71□□□□□ -1.02
Pcdha1-202ENSMUST00000193839 NbdyA0A0N4SUI7 68 aa8.71□□□□□ -1.02
Pcdha1-202ENSMUST00000193839 Dmxl2Q8BPN8 3032 aa8.69□□□□□ -1.02
Pcdha1-202ENSMUST00000193839 Sprr1aQ62266 144 aa8.68□□□□□ -1.02
Pcdha1-202ENSMUST00000193839 Celsr1O35161 3034 aa8.68□□□□□ -1.02
Pcdha1-202ENSMUST00000193839 Smim29Q8R043 75 aa8.67□□□□□ -1.02
Pcdha1-202ENSMUST00000193839 Utp20Q5XG71 2788 aaKnown RBP8.67□□□□□ -1.02
Pcdha1-202ENSMUST00000193839 Hivep1Q03172 2688 aa8.66□□□□□ -1.02
Pcdha1-202ENSMUST00000193839 Cypt14J3QPF7 87 aa8.64□□□□□ -1.03
Pcdha1-202ENSMUST00000193839 A730071L15RikQ8C4X0 137 aa8.64□□□□□ -1.03
Pcdha1-202ENSMUST00000193839 Mp68P56379 58 aa8.64□□□□□ -1.03
Pcdha1-202ENSMUST00000193839 Itpr2Q9Z329 2701 aa8.62□□□□□ -1.03
Pcdha1-202ENSMUST00000193839 Anapc11Q9CPX9 84 aa8.62□□□□□ -1.03
Pcdha1-202ENSMUST00000193839 Defb1P56386 69 aa8.62□□□□□ -1.03
Pcdha1-202ENSMUST00000193839 9530053A07RikE9PVG8 2581 aa8.61□□□□□ -1.03
Pcdha1-202ENSMUST00000193839 Gm21798J3QNU5 87 aa8.58□□□□□ -1.04
Pcdha1-202ENSMUST00000193839 FlncQ8VHX6 2726 aaKnown RBP8.58□□□□□ -1.04
Pcdha1-202ENSMUST00000193839 Nbeal2Q6ZQA0 2742 aa8.58□□□□□ -1.04
Pcdha1-202ENSMUST00000193839 Adgrg4B7ZCC9 3073 aa8.58□□□□□ -1.04
Pcdha1-202ENSMUST00000193839 Stab2Q8R4U0 2559 aa8.58□□□□□ -1.04
Pcdha1-202ENSMUST00000193839 Frem2Q6NVD0 3160 aa8.58□□□□□ -1.04
Pcdha1-202ENSMUST00000193839 DspE9Q557 2883 aaKnown RBP8.56□□□□□ -1.04
Pcdha1-202ENSMUST00000193839 Gm37013Q8K491 104 aa8.54□□□□□ -1.04
Pcdha1-202ENSMUST00000193839 Pkd1l1Q8R526 2615 aa8.54□□□□□ -1.04
Pcdha1-202ENSMUST00000193839 Gm10139O88245 57 aa8.54□□□□□ -1.04
Pcdha1-202ENSMUST00000193839 2310034C09RikQ9D746 214 aa8.54□□□□□ -1.04
Pcdha1-202ENSMUST00000193839 Gm26620Q9CY65 116 aa8.54□□□□□ -1.04
Pcdha1-202ENSMUST00000193839 6030445D17RikE9Q8F9 148 aa8.52□□□□□ -1.05
Pcdha1-202ENSMUST00000193839 HrnrQ8VHD8 2496 aa8.51□□□□□ -1.05
Pcdha1-202ENSMUST00000193839 Gm3646F6S692 53 aa8.5□□□□□ -1.05
Pcdha1-202ENSMUST00000193839 Odf3bQ5M8M2 238 aa8.49□□□□□ -1.05
Pcdha1-202ENSMUST00000193839 4933415A04RikQ9D443 101 aa8.49□□□□□ -1.05
Pcdha1-202ENSMUST00000193839 Celsr3Q91ZI0 3301 aa8.49□□□□□ -1.05
Pcdha1-202ENSMUST00000193839 Brca2P97929 3329 aa8.46□□□□□ -1.06
Pcdha1-202ENSMUST00000193839 Igfn1Q3KNY0 2849 aa8.45□□□□□ -1.06
Pcdha1-202ENSMUST00000193839 1700042G07RikB1AUF7 90 aa8.43□□□□□ -1.06
Pcdha1-202ENSMUST00000193839 Krtap29-1A2A5X4 342 aa8.42□□□□□ -1.06
Pcdha1-202ENSMUST00000193839 Gm9508A0A1W2P7W0 230 aa8.42□□□□□ -1.06
Pcdha1-202ENSMUST00000193839 Tenm4Q3UHK6 2771 aa8.41□□□□□ -1.06
Pcdha1-202ENSMUST00000193839 2310061N02RikQ9D6S9 174 aa8.4□□□□□ -1.07
Pcdha1-202ENSMUST00000193839 Col6a3E9PWQ3 3284 aa8.37□□□□□ -1.07
Pcdha1-202ENSMUST00000193839 Gm9955Q8CEJ8 102 aa8.37□□□□□ -1.07
Pcdha1-202ENSMUST00000193839 Zzef1Q5SSH7 2924 aa8.36□□□□□ -1.07
Pcdha1-202ENSMUST00000193839 Gm16253D3Z167 63 aa8.35□□□□□ -1.07
Pcdha1-202ENSMUST00000193839 Wdfy3Q6VNB8 3508 aa8.35□□□□□ -1.07
Pcdha1-202ENSMUST00000193839 VcanQ62059 3357 aa8.35□□□□□ -1.07
Pcdha1-202ENSMUST00000193839 Dchs2A0A0A6YW72 3346 aa8.34□□□□□ -1.07
Pcdha1-202ENSMUST00000193839 Trank1Q8BV79 2999 aa8.34□□□□□ -1.07
Pcdha1-202ENSMUST00000193839 Tex15F8VPN2 2785 aa8.33□□□□□ -1.08
Pcdha1-202ENSMUST00000193839 Rnase13Q5GAM7 153 aa8.32□□□□□ -1.08
Pcdha1-202ENSMUST00000193839 CriptO70333 101 aa8.31□□□□□ -1.08
Pcdha1-202ENSMUST00000193839 Tenm3Q9WTS6 2715 aa8.31□□□□□ -1.08
Pcdha1-202ENSMUST00000193839 2310050C09RikG5E8Z3 280 aa8.3□□□□□ -1.08
Pcdha1-202ENSMUST00000193839 Gm9507D3Z5T3 223 aa8.26□□□□□ -1.09
Pcdha1-202ENSMUST00000193839 Gm9821Q8K076 103 aa8.26□□□□□ -1.09
Pcdha1-202ENSMUST00000193839 Gm3880A0A1B0GSB3 72 aa8.25□□□□□ -1.09
Pcdha1-202ENSMUST00000193839 Celsr2Q9R0M0 2920 aa8.22□□□□□ -1.09
Pcdha1-202ENSMUST00000193839 Krtap13O88375 197 aa8.21□□□□□ -1.1
Pcdha1-202ENSMUST00000193839 Gm4491E0CX42 125 aa8.21□□□□□ -1.1
Pcdha1-202ENSMUST00000193839 Chd9Q8BYH8 2885 aa8.2□□□□□ -1.1
Pcdha1-202ENSMUST00000193839 FcgbpE9Q0B5 2583 aa8.2□□□□□ -1.1
Pcdha1-202ENSMUST00000193839 Gm2310J3QNJ2 377 aa8.2□□□□□ -1.1
Pcdha1-202ENSMUST00000193839 Nf1Q04690 2841 aa8.19□□□□□ -1.1
Pcdha1-202ENSMUST00000193839 DmdP11531 3678 aa8.16□□□□□ -1.1
Pcdha1-202ENSMUST00000193839 RelnQ60841 3461 aa8.15□□□□□ -1.11
Pcdha1-202ENSMUST00000193839 Pla2g10Q9QXX3 151 aa8.13□□□□□ -1.11
Pcdha1-202ENSMUST00000193839 Krtap14O08640 167 aa8.13□□□□□ -1.11
Pcdha1-202ENSMUST00000193839 Srrm2Q8BTI8 2703 aaKnown RBP8.13□□□□□ -1.11
Pcdha1-202ENSMUST00000193839 Dchs1E9PVD3 3291 aa8.11□□□□□ -1.11
Retrieved 100 of 22,080 RNA–protein pairs in 97 ms