RNA–Protein interactions for RNA: ENSMUST00000160721.7

Pcdh1-203, Transcript of Protocadherin 1 (Fragment), mousemouse

TSL 5 BASIC

Gene Pcdh1, Length 5,416 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1-203ENSMUST00000160721 Plac8Q9JI48 112 aa10.48□□□□□ -0.73
Pcdh1-203ENSMUST00000160721 C530025M09RikF6RGA8 229 aa10.48□□□□□ -0.73
Pcdh1-203ENSMUST00000160721 AW011738F6S7Q2 159 aa10.46□□□□□ -0.74
Pcdh1-203ENSMUST00000160721 Uqcr11Q9CPX8 56 aa10.45□□□□□ -0.74
Pcdh1-203ENSMUST00000160721 Gm36176A0A1W2P8D5 158 aa10.45□□□□□ -0.74
Pcdh1-203ENSMUST00000160721 NipblQ6KCD5 2798 aaKnown RBP10.45□□□□□ -0.74
Pcdh1-203ENSMUST00000160721 Fam229bQ8CF36 80 aa10.45□□□□□ -0.74
Pcdh1-203ENSMUST00000160721 Sprr1bQ62267 153 aa10.44□□□□□ -0.74
Pcdh1-203ENSMUST00000160721 Gm11213A0A1B0GR83 88 aa10.42□□□□□ -0.74
Pcdh1-203ENSMUST00000160721 Ranbp2Q9ERU9 3053 aaKnown RBP10.42□□□□□ -0.74
Pcdh1-203ENSMUST00000160721 Chd6A3KFM7 2711 aa10.41□□□□□ -0.74
Pcdh1-203ENSMUST00000160721 Nbeal2Q6ZQA0 2742 aa10.41□□□□□ -0.74
Pcdh1-203ENSMUST00000160721 Gm7276Q3TYW4 209 aa10.4□□□□□ -0.74
Pcdh1-203ENSMUST00000160721 Gm10643Q3URG9 111 aa10.4□□□□□ -0.75
Pcdh1-203ENSMUST00000160721 Unc80Q8BLN6 3261 aa10.4□□□□□ -0.75
Pcdh1-203ENSMUST00000160721 Chtf8P0CG14 533 aa10.39□□□□□ -0.75
Pcdh1-203ENSMUST00000160721 Rnase13Q5GAM7 153 aa10.38□□□□□ -0.75
Pcdh1-203ENSMUST00000160721 Col6a5A6H584 2640 aa10.38□□□□□ -0.75
Pcdh1-203ENSMUST00000160721 Cypt15B1AXS0 87 aa10.37□□□□□ -0.75
Pcdh1-203ENSMUST00000160721 FryE9Q8I9 3020 aa10.37□□□□□ -0.75
Pcdh1-203ENSMUST00000160721 Anapc11Q9CPX9 84 aa10.36□□□□□ -0.75
Pcdh1-203ENSMUST00000160721 Defb9Q8R2I6 67 aa10.34□□□□□ -0.75
Pcdh1-203ENSMUST00000160721 CnbpP53996 178 aaKnown RBP10.32□□□□□ -0.76
Pcdh1-203ENSMUST00000160721 9530053A07RikE9PVG8 2581 aa10.31□□□□□ -0.76
Pcdh1-203ENSMUST00000160721 Pkd1l1Q8R526 2615 aa10.29□□□□□ -0.76
Pcdh1-203ENSMUST00000160721 Gm17349F7BGH6 99 aa10.29□□□□□ -0.76
Pcdh1-203ENSMUST00000160721 Hivep1Q03172 2688 aa10.28□□□□□ -0.76
Pcdh1-203ENSMUST00000160721 Celsr1O35161 3034 aa10.27□□□□□ -0.76
Pcdh1-203ENSMUST00000160721 Kmt2bO08550 2713 aa10.26□□□□□ -0.77
Pcdh1-203ENSMUST00000160721 BptfA2A654 3036 aaKnown RBP10.22□□□□□ -0.77
Pcdh1-203ENSMUST00000160721 Tep1P97499 2629 aa10.22□□□□□ -0.77
Pcdh1-203ENSMUST00000160721 Smim29Q8R043 75 aa10.2□□□□□ -0.78
Pcdh1-203ENSMUST00000160721 Fam104aA2A6P4 185 aa10.19□□□□□ -0.78
Pcdh1-203ENSMUST00000160721 Gm21798J3QNU5 87 aa10.19□□□□□ -0.78
Pcdh1-203ENSMUST00000160721 2310034C09RikQ9D746 214 aa10.19□□□□□ -0.78
Pcdh1-203ENSMUST00000160721 NbeaQ9EPN1 2936 aa10.19□□□□□ -0.78
Pcdh1-203ENSMUST00000160721 Col6a3E9PWQ3 3284 aa10.18□□□□□ -0.78
Pcdh1-203ENSMUST00000160721 Wdfy4E9Q2M9 3149 aa10.18□□□□□ -0.78
Pcdh1-203ENSMUST00000160721 Dmxl2Q8BPN8 3032 aa10.15□□□□□ -0.78
Pcdh1-203ENSMUST00000160721 Gm3880A0A1B0GSB3 72 aa10.12□□□□□ -0.79
Pcdh1-203ENSMUST00000160721 Gm26620Q9CY65 116 aa10.12□□□□□ -0.79
Pcdh1-203ENSMUST00000160721 Zcchc13Q9D548 170 aa10.12□□□□□ -0.79
Pcdh1-203ENSMUST00000160721 CriptO70333 101 aa10.11□□□□□ -0.79
Pcdh1-203ENSMUST00000160721 Igfn1Q3KNY0 2849 aa10.11□□□□□ -0.79
Pcdh1-203ENSMUST00000160721 Gm9508A0A1W2P7W0 230 aa10.11□□□□□ -0.79
Pcdh1-203ENSMUST00000160721 FrylF8VQ05 3007 aa10.1□□□□□ -0.79
Pcdh1-203ENSMUST00000160721 Gm20538F6Z9R1 75 aa10.09□□□□□ -0.79
Pcdh1-203ENSMUST00000160721 Gm10320E9PW43 113 aa10.09□□□□□ -0.79
Pcdh1-203ENSMUST00000160721 HrnrQ8VHD8 2496 aa10.09□□□□□ -0.79
Pcdh1-203ENSMUST00000160721 Stab2Q8R4U0 2559 aa10.07□□□□□ -0.8
Pcdh1-203ENSMUST00000160721 Lama1P19137 3084 aa10.07□□□□□ -0.8
Pcdh1-203ENSMUST00000160721 6030445D17RikE9Q8F9 148 aa10.06□□□□□ -0.8
Pcdh1-203ENSMUST00000160721 Dchs2A0A0A6YW72 3346 aa10.06□□□□□ -0.8
Pcdh1-203ENSMUST00000160721 Itpr2Q9Z329 2701 aa10.05□□□□□ -0.8
Pcdh1-203ENSMUST00000160721 Brca2P97929 3329 aa10.05□□□□□ -0.8
Pcdh1-203ENSMUST00000160721 Utp20Q5XG71 2788 aaKnown RBP10.04□□□□□ -0.8
Pcdh1-203ENSMUST00000160721 Frem2Q6NVD0 3160 aa10.04□□□□□ -0.8
Pcdh1-203ENSMUST00000160721 Celsr3Q91ZI0 3301 aa10.03□□□□□ -0.8
Pcdh1-203ENSMUST00000160721 Cystm1Q8K353 104 aa10.03□□□□□ -0.8
Pcdh1-203ENSMUST00000160721 DspE9Q557 2883 aaKnown RBP10.03□□□□□ -0.8
Pcdh1-203ENSMUST00000160721 Pla2g10Q9QXX3 151 aa10.02□□□□□ -0.81
Pcdh1-203ENSMUST00000160721 Cypt14J3QPF7 87 aa10.01□□□□□ -0.81
Pcdh1-203ENSMUST00000160721 VcanQ62059 3357 aa9.98□□□□□ -0.81
Pcdh1-203ENSMUST00000160721 Adgrg4B7ZCC9 3073 aa9.98□□□□□ -0.81
Pcdh1-203ENSMUST00000160721 NbdyA0A0N4SUI7 68 aa9.97□□□□□ -0.81
Pcdh1-203ENSMUST00000160721 Gm10065F6TJM2 114 aa9.96□□□□□ -0.81
Pcdh1-203ENSMUST00000160721 Tenm4Q3UHK6 2771 aa9.95□□□□□ -0.82
Pcdh1-203ENSMUST00000160721 Gm9955Q8CEJ8 102 aa9.95□□□□□ -0.82
Pcdh1-203ENSMUST00000160721 Gm9507D3Z5T3 223 aa9.91□□□□□ -0.82
Pcdh1-203ENSMUST00000160721 Gm4491E0CX42 125 aa9.9□□□□□ -0.82
Pcdh1-203ENSMUST00000160721 Tex15F8VPN2 2785 aa9.86□□□□□ -0.83
Pcdh1-203ENSMUST00000160721 FlncQ8VHX6 2726 aaKnown RBP9.86□□□□□ -0.83
Pcdh1-203ENSMUST00000160721 Gm9821Q8K076 103 aa9.82□□□□□ -0.84
Pcdh1-203ENSMUST00000160721 Spink7Q6IE32 76 aa9.81□□□□□ -0.84
Pcdh1-203ENSMUST00000160721 Gm3646F6S692 53 aa9.8□□□□□ -0.84
Pcdh1-203ENSMUST00000160721 Gm10139O88245 57 aa9.8□□□□□ -0.84
Pcdh1-203ENSMUST00000160721 Odf3bQ5M8M2 238 aa9.77□□□□□ -0.85
Pcdh1-203ENSMUST00000160721 A730071L15RikQ8C4X0 137 aa9.75□□□□□ -0.85
Pcdh1-203ENSMUST00000160721 Gm37013Q8K491 104 aa9.75□□□□□ -0.85
Pcdh1-203ENSMUST00000160721 Krtap10-4Q08EG8 221 aa9.73□□□□□ -0.85
Pcdh1-203ENSMUST00000160721 Dchs1E9PVD3 3291 aa9.73□□□□□ -0.85
Pcdh1-203ENSMUST00000160721 Zzef1Q5SSH7 2924 aa9.73□□□□□ -0.85
Pcdh1-203ENSMUST00000160721 FcgbpE9Q0B5 2583 aa9.73□□□□□ -0.85
Pcdh1-203ENSMUST00000160721 Sprr1aQ62266 144 aa9.72□□□□□ -0.85
Pcdh1-203ENSMUST00000160721 Krtap13O88375 197 aa9.7□□□□□ -0.86
Pcdh1-203ENSMUST00000160721 2310050C09RikG5E8Z3 280 aa9.69□□□□□ -0.86
Pcdh1-203ENSMUST00000160721 Krtap15-1Q9QZU5 150 aa9.65□□□□□ -0.87
Pcdh1-203ENSMUST00000160721 SpegQ62407 3262 aa9.63□□□□□ -0.87
Pcdh1-203ENSMUST00000160721 Trank1Q8BV79 2999 aa9.63□□□□□ -0.87
Pcdh1-203ENSMUST00000160721 Celsr2Q9R0M0 2920 aa9.63□□□□□ -0.87
Pcdh1-203ENSMUST00000160721 Gm16253D3Z167 63 aa9.6□□□□□ -0.87
Pcdh1-203ENSMUST00000160721 Chd9Q8BYH8 2885 aa9.6□□□□□ -0.87
Pcdh1-203ENSMUST00000160721 Wdfy3Q6VNB8 3508 aa9.59□□□□□ -0.87
Pcdh1-203ENSMUST00000160721 Krtap10-10A0A1W2P7T6 217 aa9.59□□□□□ -0.87
Pcdh1-203ENSMUST00000160721 Myo15aQ9QZZ4 3511 aa9.57□□□□□ -0.88
Pcdh1-203ENSMUST00000160721 Nf1Q04690 2841 aa9.52□□□□□ -0.89
Pcdh1-203ENSMUST00000160721 Camk2n1Q6QWF9 78 aa9.52□□□□□ -0.89
Pcdh1-203ENSMUST00000160721 RelnQ60841 3461 aa9.52□□□□□ -0.89
Pcdh1-203ENSMUST00000160721 4933415A04RikQ9D443 101 aa9.51□□□□□ -0.89
Pcdh1-203ENSMUST00000160721 1700042G07RikB1AUF7 90 aa9.5□□□□□ -0.89
Retrieved 100 of 22,080 RNA–protein pairs in 55.1 ms