RNA–Protein interactions for RNA: ENSMUST00000129269.7

Stag1-206, Transcript of Cohesin subunit SA-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Stag1, Length 6,186 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Stag1-206ENSMUST00000129269 Ubr5Q80TP3 2792 aa8.84□□□□□ -0.99
Stag1-206ENSMUST00000129269 Smim29Q8R043 75 aa8.83□□□□□ -1
Stag1-206ENSMUST00000129269 Krtap15-1Q9QZU5 150 aa8.83□□□□□ -1
Stag1-206ENSMUST00000129269 Spink7Q6IE32 76 aa8.82□□□□□ -1
Stag1-206ENSMUST00000129269 Map1aQ9QYR6 2776 aa8.81□□□□□ -1
Stag1-206ENSMUST00000129269 Fam229bQ8CF36 80 aa8.79□□□□□ -1
Stag1-206ENSMUST00000129269 Gm9507D3Z5T3 223 aa8.79□□□□□ -1
Stag1-206ENSMUST00000129269 Gm7276Q3TYW4 209 aa8.79□□□□□ -1
Stag1-206ENSMUST00000129269 Gm10065F6TJM2 114 aa8.78□□□□□ -1
Stag1-206ENSMUST00000129269 9530053A07RikE9PVG8 2581 aa8.78□□□□□ -1
Stag1-206ENSMUST00000129269 Nbeal2Q6ZQA0 2742 aa8.76□□□□□ -1.01
Stag1-206ENSMUST00000129269 HrnrQ8VHD8 2496 aa8.76□□□□□ -1.01
Stag1-206ENSMUST00000129269 Dmxl1Q6PNC0 3013 aa8.74□□□□□ -1.01
Stag1-206ENSMUST00000129269 Prrc2cQ3TLH4 2846 aaKnown RBP8.74□□□□□ -1.01
Stag1-206ENSMUST00000129269 Cypt14J3QPF7 87 aa8.73□□□□□ -1.01
Stag1-206ENSMUST00000129269 Chtf8P0CG14 533 aa8.73□□□□□ -1.01
Stag1-206ENSMUST00000129269 Phxr4P15974 95 aa8.73□□□□□ -1.01
Stag1-206ENSMUST00000129269 KalrnA2CG49 2964 aa8.72□□□□□ -1.01
Stag1-206ENSMUST00000129269 Fbn2Q61555 2907 aa8.72□□□□□ -1.01
Stag1-206ENSMUST00000129269 Mp68P56379 58 aa8.72□□□□□ -1.01
Stag1-206ENSMUST00000129269 Chd7A2AJK6 2986 aaKnown RBP8.72□□□□□ -1.01
Stag1-206ENSMUST00000129269 Ash1lQ99MY8 2958 aa8.69□□□□□ -1.02
Stag1-206ENSMUST00000129269 Krtap10-4Q08EG8 221 aa8.67□□□□□ -1.02
Stag1-206ENSMUST00000129269 Cdh23Q99PF4 3354 aa8.66□□□□□ -1.02
Stag1-206ENSMUST00000129269 2310034C09RikQ9D746 214 aa8.65□□□□□ -1.02
Stag1-206ENSMUST00000129269 AtmQ62388 3066 aa8.64□□□□□ -1.03
Stag1-206ENSMUST00000129269 Krtap13O88375 197 aa8.64□□□□□ -1.03
Stag1-206ENSMUST00000129269 Chd6A3KFM7 2711 aa8.64□□□□□ -1.03
Stag1-206ENSMUST00000129269 Fam229aB2KGE5 128 aa8.64□□□□□ -1.03
Stag1-206ENSMUST00000129269 Cfap54Q8C6S9 3106 aa8.63□□□□□ -1.03
Stag1-206ENSMUST00000129269 Tep1P97499 2629 aa8.62□□□□□ -1.03
Stag1-206ENSMUST00000129269 Tnrc18Q80WC3 2878 aa8.62□□□□□ -1.03
Stag1-206ENSMUST00000129269 Gm4491E0CX42 125 aa8.61□□□□□ -1.03
Stag1-206ENSMUST00000129269 NipblQ6KCD5 2798 aaKnown RBP8.61□□□□□ -1.03
Stag1-206ENSMUST00000129269 Gm10320E9PW43 113 aa8.6□□□□□ -1.03
Stag1-206ENSMUST00000129269 Pkd1l1Q8R526 2615 aa8.6□□□□□ -1.03
Stag1-206ENSMUST00000129269 Gm20538F6Z9R1 75 aa8.59□□□□□ -1.03
Stag1-206ENSMUST00000129269 6030445D17RikE9Q8F9 148 aa8.57□□□□□ -1.04
Stag1-206ENSMUST00000129269 Krtap10-10A0A1W2P7T6 217 aa8.56□□□□□ -1.04
Stag1-206ENSMUST00000129269 Cystm1Q8K353 104 aa8.56□□□□□ -1.04
Stag1-206ENSMUST00000129269 Col6a5A6H584 2640 aa8.55□□□□□ -1.04
Stag1-206ENSMUST00000129269 Sec61bQ9CQS8 96 aaKnown RBP8.55□□□□□ -1.04
Stag1-206ENSMUST00000129269 Uqcr11Q9CPX8 56 aa8.54□□□□□ -1.04
Stag1-206ENSMUST00000129269 Muc2Q80Z19 2680 aa8.53□□□□□ -1.04
Stag1-206ENSMUST00000129269 Kmt2bO08550 2713 aa8.53□□□□□ -1.04
Stag1-206ENSMUST00000129269 2310050C09RikG5E8Z3 280 aa8.53□□□□□ -1.04
Stag1-206ENSMUST00000129269 Ranbp2Q9ERU9 3053 aaKnown RBP8.52□□□□□ -1.05
Stag1-206ENSMUST00000129269 Odf3bQ5M8M2 238 aa8.51□□□□□ -1.05
Stag1-206ENSMUST00000129269 Gm21798J3QNU5 87 aa8.51□□□□□ -1.05
Stag1-206ENSMUST00000129269 Gm10643Q3URG9 111 aa8.49□□□□□ -1.05
Stag1-206ENSMUST00000129269 AspmQ8CJ27 3122 aa8.49□□□□□ -1.05
Stag1-206ENSMUST00000129269 Stab2Q8R4U0 2559 aa8.49□□□□□ -1.05
Stag1-206ENSMUST00000129269 Vps13aQ5H8C4 3166 aa8.47□□□□□ -1.05
Stag1-206ENSMUST00000129269 BptfA2A654 3036 aaKnown RBP8.45□□□□□ -1.06
Stag1-206ENSMUST00000129269 Sprr1aQ62266 144 aa8.44□□□□□ -1.06
Stag1-206ENSMUST00000129269 Unc80Q8BLN6 3261 aa8.43□□□□□ -1.06
Stag1-206ENSMUST00000129269 Hivep1Q03172 2688 aa8.43□□□□□ -1.06
Stag1-206ENSMUST00000129269 Celsr1O35161 3034 aa8.43□□□□□ -1.06
Stag1-206ENSMUST00000129269 Gm10139O88245 57 aa8.42□□□□□ -1.06
Stag1-206ENSMUST00000129269 Gm5767A0A0J9YTU8 78 aa8.42□□□□□ -1.06
Stag1-206ENSMUST00000129269 FryE9Q8I9 3020 aa8.41□□□□□ -1.06
Stag1-206ENSMUST00000129269 Szt2A2A9C3 3431 aa8.41□□□□□ -1.06
Stag1-206ENSMUST00000129269 Igfn1Q3KNY0 2849 aa8.4□□□□□ -1.07
Stag1-206ENSMUST00000129269 Krtap29-1A2A5X4 342 aa8.38□□□□□ -1.07
Stag1-206ENSMUST00000129269 Gm3880A0A1B0GSB3 72 aa8.37□□□□□ -1.07
Stag1-206ENSMUST00000129269 Tnp2P11378 117 aa8.36□□□□□ -1.07
Stag1-206ENSMUST00000129269 CriptO70333 101 aa8.36□□□□□ -1.07
Stag1-206ENSMUST00000129269 Gm9955Q8CEJ8 102 aa8.35□□□□□ -1.07
Stag1-206ENSMUST00000129269 Lrrc37aB1AWG4 3215 aa8.35□□□□□ -1.07
Stag1-206ENSMUST00000129269 Itpr2Q9Z329 2701 aa8.34□□□□□ -1.07
Stag1-206ENSMUST00000129269 Gm2696A0A1W2P709 240 aa8.34□□□□□ -1.07
Stag1-206ENSMUST00000129269 A730071L15RikQ8C4X0 137 aa8.33□□□□□ -1.08
Stag1-206ENSMUST00000129269 Camk2n1Q6QWF9 78 aa8.32□□□□□ -1.08
Stag1-206ENSMUST00000129269 Gm19426M0QWC7 77 aa8.28□□□□□ -1.08
Stag1-206ENSMUST00000129269 Tenm4Q3UHK6 2771 aa8.25□□□□□ -1.09
Stag1-206ENSMUST00000129269 Gm16253D3Z167 63 aa8.25□□□□□ -1.09
Stag1-206ENSMUST00000129269 Krtap14O08640 167 aa8.2□□□□□ -1.1
Stag1-206ENSMUST00000129269 FcgbpE9Q0B5 2583 aa8.19□□□□□ -1.1
Stag1-206ENSMUST00000129269 2310061N02RikQ9D6S9 174 aa8.19□□□□□ -1.1
Stag1-206ENSMUST00000129269 Dchs2A0A0A6YW72 3346 aa8.19□□□□□ -1.1
Stag1-206ENSMUST00000129269 NbeaQ9EPN1 2936 aa8.18□□□□□ -1.1
Stag1-206ENSMUST00000129269 Lama1P19137 3084 aa8.18□□□□□ -1.1
Stag1-206ENSMUST00000129269 Frem2Q6NVD0 3160 aa8.18□□□□□ -1.1
Stag1-206ENSMUST00000129269 Utp20Q5XG71 2788 aaKnown RBP8.18□□□□□ -1.1
Stag1-206ENSMUST00000129269 Celsr3Q91ZI0 3301 aa8.17□□□□□ -1.1
Stag1-206ENSMUST00000129269 Dmxl2Q8BPN8 3032 aa8.15□□□□□ -1.1
Stag1-206ENSMUST00000129269 Col6a3E9PWQ3 3284 aa8.15□□□□□ -1.1
Stag1-206ENSMUST00000129269 SmcpP15265 143 aa8.14□□□□□ -1.11
Stag1-206ENSMUST00000129269 Gm37013Q8K491 104 aa8.13□□□□□ -1.11
Stag1-206ENSMUST00000129269 Brca2P97929 3329 aa8.12□□□□□ -1.11
Stag1-206ENSMUST00000129269 Gm3646F6S692 53 aa8.11□□□□□ -1.11
Stag1-206ENSMUST00000129269 FlncQ8VHX6 2726 aaKnown RBP8.11□□□□□ -1.11
Stag1-206ENSMUST00000129269 Tex15F8VPN2 2785 aa8.1□□□□□ -1.11
Stag1-206ENSMUST00000129269 Adgrg4B7ZCC9 3073 aa8.1□□□□□ -1.11
Stag1-206ENSMUST00000129269 BC029722A0A0N4SW31 51 aa8.08□□□□□ -1.12
Stag1-206ENSMUST00000129269 Wdfy4E9Q2M9 3149 aa8.07□□□□□ -1.12
Stag1-206ENSMUST00000129269 FrylF8VQ05 3007 aa8.02□□□□□ -1.13
Stag1-206ENSMUST00000129269 2310057N15RikQ9D6T8 200 aa8□□□□□ -1.13
Stag1-206ENSMUST00000129269 4933415A04RikQ9D443 101 aa7.98□□□□□ -1.13
Stag1-206ENSMUST00000129269 Zzef1Q5SSH7 2924 aa7.93□□□□□ -1.14
Retrieved 100 of 22,080 RNA–protein pairs in 57.3 ms