RNA–Protein interactions for RNA: ENSMUST00000129269.7

Stag1-206, Transcript of Cohesin subunit SA-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Stag1, Length 6,186 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Stag1-206ENSMUST00000129269 Rhox8Q6VSS7 320 aa25.57■■□□□ 1.68
Stag1-206ENSMUST00000129269 Esf1Q3V1V3 845 aaKnown RBP22.87■■□□□ 1.25
Stag1-206ENSMUST00000129269 Ccdc136Q3TVA9 1136 aa22.73■■□□□ 1.23
Stag1-206ENSMUST00000129269 Cngb1E1AZ71 1325 aa22.66■■□□□ 1.22
Stag1-206ENSMUST00000129269 Zeb1Q64318 1117 aa22.52■■□□□ 1.2
Stag1-206ENSMUST00000129269 Ehmt2Q9Z148 1263 aaKnown RBP22.45■■□□□ 1.18
Stag1-206ENSMUST00000129269 Ube2uB1AUC4 352 aa22.33■■□□□ 1.16
Stag1-206ENSMUST00000129269 Gab3Q8BSM5 595 aa22.2■■□□□ 1.14
Stag1-206ENSMUST00000129269 Npm2Q80W85 207 aa22.19■■□□□ 1.14
Stag1-206ENSMUST00000129269 Myt1lP97500 1187 aa21.99■■□□□ 1.11
Stag1-206ENSMUST00000129269 Trim41Q5NCC3 630 aa21.9■■□□□ 1.1
Stag1-206ENSMUST00000129269 Rpgrip1Q9EPQ2 1331 aa21.87■■□□□ 1.09
Stag1-206ENSMUST00000129269 NischQ80TM9 1593 aa21.83■■□□□ 1.09
Stag1-206ENSMUST00000129269 Il27Q8K3I6 234 aa21.66■■□□□ 1.06
Stag1-206ENSMUST00000129269 Wdr66E9Q743 1299 aa21.64■■□□□ 1.05
Stag1-206ENSMUST00000129269 Las1lA2BE28 776 aaKnown RBP21.49■■□□□ 1.03
Stag1-206ENSMUST00000129269 Abcc9P70170 1546 aa21.43■■□□□ 1.02
Stag1-206ENSMUST00000129269 Gm35339A0A140LHH9 1649 aa21.31■■□□□ 1
Stag1-206ENSMUST00000129269 UbtfP25976 765 aaKnown RBP21.11■□□□□ 0.97
Stag1-206ENSMUST00000129269 Ap3b1Q9Z1T1 1105 aa20.99■□□□□ 0.95
Stag1-206ENSMUST00000129269 Zcchc6Q5BLK4 1491 aaKnown RBP20.92■□□□□ 0.94
Stag1-206ENSMUST00000129269 Ifnlr1Q8CGK5 535 aa20.84■□□□□ 0.93
Stag1-206ENSMUST00000129269 Slc24a1Q91WD8 1130 aa20.82■□□□□ 0.92
Stag1-206ENSMUST00000129269 Os9Q8K2C7 672 aa20.73■□□□□ 0.91
Stag1-206ENSMUST00000129269 Fam50aQ9WV03 339 aaKnown RBP20.7■□□□□ 0.9
Stag1-206ENSMUST00000129269 Neurod1Q60867 357 aa20.68■□□□□ 0.9
Stag1-206ENSMUST00000129269 Plppr3Q7TPB0 716 aa20.67■□□□□ 0.9
Stag1-206ENSMUST00000129269 Zbtb7cQ8VCZ7 619 aa20.64■□□□□ 0.89
Stag1-206ENSMUST00000129269 Npm1Q61937 292 aaKnown RBP20.63■□□□□ 0.89
Stag1-206ENSMUST00000129269 Gm13697A2AK42 830 aa20.55■□□□□ 0.88
Stag1-206ENSMUST00000129269 Acin1Q9JIX8 1338 aaKnown RBP20.51■□□□□ 0.87
Stag1-206ENSMUST00000129269 Pelp1Q9DBD5 1123 aaKnown RBP20.47■□□□□ 0.87
Stag1-206ENSMUST00000129269 HrcG5E8J6 738 aa20.44■□□□□ 0.86
Stag1-206ENSMUST00000129269 Ttbk1Q6PCN3 1308 aa20.43■□□□□ 0.86
Stag1-206ENSMUST00000129269 Hnrnpul2Q00PI9 745 aaKnown RBP20.37■□□□□ 0.85
Stag1-206ENSMUST00000129269 Fkbp15Q6P9Q6 1216 aaKnown RBP20.35■□□□□ 0.85
Stag1-206ENSMUST00000129269 Lmod2Q3UHZ5 550 aa20.31■□□□□ 0.84
Stag1-206ENSMUST00000129269 Chic1Q8CBW7 227 aa20.27■□□□□ 0.84
Stag1-206ENSMUST00000129269 NefmP08553 848 aa20.21■□□□□ 0.83
Stag1-206ENSMUST00000129269 Atp1b4Q99ME6 356 aa20.19■□□□□ 0.82
Stag1-206ENSMUST00000129269 NclP09405 707 aaKnown RBP20.19■□□□□ 0.82
Stag1-206ENSMUST00000129269 Erich6D3Z6S9 713 aa20.14■□□□□ 0.81
Stag1-206ENSMUST00000129269 Anp32bQ9EST5 272 aaKnown RBP20.12■□□□□ 0.81
Stag1-206ENSMUST00000129269 Ubl4bQ9CQ84 188 aa20.11■□□□□ 0.81
Stag1-206ENSMUST00000129269 Gm13695A2AK44 830 aa20.1■□□□□ 0.81
Stag1-206ENSMUST00000129269 Zbtb4Q5F293 982 aa20.07■□□□□ 0.8
Stag1-206ENSMUST00000129269 Ppargc1bQ8VHJ7 1014 aa20.06■□□□□ 0.8
Stag1-206ENSMUST00000129269 Stra8P70278 393 aa20.06■□□□□ 0.8
Stag1-206ENSMUST00000129269 Ccdc180J3QNE4 1664 aa20.05■□□□□ 0.8
Stag1-206ENSMUST00000129269 NrdcQ8BHG1 1161 aa20.04■□□□□ 0.8
Stag1-206ENSMUST00000129269 CenpbP27790 599 aa19.95■□□□□ 0.78
Stag1-206ENSMUST00000129269 Prdm10Q3UTQ7 1184 aa19.95■□□□□ 0.78
Stag1-206ENSMUST00000129269 Plekhg3Q4VAC9 1341 aa19.95■□□□□ 0.78
Stag1-206ENSMUST00000129269 Pcgf6Q99NA9 353 aa19.94■□□□□ 0.78
Stag1-206ENSMUST00000129269 Eif5bQ05D44 1216 aaKnown RBP19.92■□□□□ 0.78
Stag1-206ENSMUST00000129269 Safb2Q80YR5 991 aaKnown RBP19.84■□□□□ 0.77
Stag1-206ENSMUST00000129269 Rtl1Q7M732 1744 aa19.76■□□□□ 0.75
Stag1-206ENSMUST00000129269 Abcc8B2RUS7 1588 aa19.73■□□□□ 0.75
Stag1-206ENSMUST00000129269 NeflP08551 543 aa19.71■□□□□ 0.75
Stag1-206ENSMUST00000129269 Amer1Q7TS75 1132 aa19.69■□□□□ 0.74
Stag1-206ENSMUST00000129269 TonslQ6NZL6 1363 aa19.64■□□□□ 0.73
Stag1-206ENSMUST00000129269 Cdk11bP24788 784 aaKnown RBP19.62■□□□□ 0.73
Stag1-206ENSMUST00000129269 Supt5hO55201 1082 aaKnown RBP19.58■□□□□ 0.73
Stag1-206ENSMUST00000129269 Nlrp6Q91WS2 869 aa19.55■□□□□ 0.72
Stag1-206ENSMUST00000129269 P3h3Q8CG70 732 aa19.52■□□□□ 0.72
Stag1-206ENSMUST00000129269 Brd4Q9ESU6 1400 aaKnown RBP19.51■□□□□ 0.71
Stag1-206ENSMUST00000129269 Mier1Q5UAK0 511 aa19.5■□□□□ 0.71
Stag1-206ENSMUST00000129269 DiexfQ8BTT6 772 aaKnown RBP19.47■□□□□ 0.71
Stag1-206ENSMUST00000129269 Polr3glQ8R0C0 218 aa19.47■□□□□ 0.71
Stag1-206ENSMUST00000129269 Nop58Q6DFW4 536 aaKnown RBP19.43■□□□□ 0.7
Stag1-206ENSMUST00000129269 Eid3Q3V124 375 aa19.43■□□□□ 0.7
Stag1-206ENSMUST00000129269 Chic2Q9D9G3 165 aa19.42■□□□□ 0.7
Stag1-206ENSMUST00000129269 MyclP10166 368 aa19.41■□□□□ 0.7
Stag1-206ENSMUST00000129269 Mapk8ip2Q9ERE9 830 aa19.4■□□□□ 0.7
Stag1-206ENSMUST00000129269 Clip1Q922J3 1391 aa19.37■□□□□ 0.69
Stag1-206ENSMUST00000129269 Rangap1P46061 589 aaKnown RBP19.35■□□□□ 0.69
Stag1-206ENSMUST00000129269 Hdac5Q9Z2V6 1113 aa19.31■□□□□ 0.68
Stag1-206ENSMUST00000129269 Rb1cc1Q9ESK9 1588 aa19.28■□□□□ 0.68
Stag1-206ENSMUST00000129269 Arhgap27A2AB59 869 aa19.26■□□□□ 0.67
Stag1-206ENSMUST00000129269 Kif15Q6P9L6 1387 aa19.24■□□□□ 0.67
Stag1-206ENSMUST00000129269 Ercc6F8VPZ5 1481 aa19.22■□□□□ 0.67
Stag1-206ENSMUST00000129269 4933416C03RikQ3V063 378 aa19.2■□□□□ 0.66
Stag1-206ENSMUST00000129269 Tnnt3Q9QZ47 272 aa19.2■□□□□ 0.66
Stag1-206ENSMUST00000129269 Myt1Q8CFC2 1127 aa19.19■□□□□ 0.66
Stag1-206ENSMUST00000129269 Ppp1r18Q8BQ30 594 aa19.17■□□□□ 0.66
Stag1-206ENSMUST00000129269 NacadQ5SWP3 1504 aa19.1■□□□□ 0.65
Stag1-206ENSMUST00000129269 BlmO88700 1416 aa19.1■□□□□ 0.65
Stag1-206ENSMUST00000129269 Irx6Q9ER75 438 aa19.08■□□□□ 0.65
Stag1-206ENSMUST00000129269 Rsf1E9PWW9 1441 aaKnown RBP19.07■□□□□ 0.64
Stag1-206ENSMUST00000129269 Clstn2Q9ER65 966 aa19.05■□□□□ 0.64
Stag1-206ENSMUST00000129269 NgefQ8CHT1 710 aa19.01■□□□□ 0.63
Stag1-206ENSMUST00000129269 ArxO35085 564 aa18.98■□□□□ 0.63
Stag1-206ENSMUST00000129269 MlecQ6ZQI3 291 aaKnown RBP18.98■□□□□ 0.63
Stag1-206ENSMUST00000129269 Kdm2aP59997 1161 aa18.95■□□□□ 0.62
Stag1-206ENSMUST00000129269 Rad21Q61550 635 aaKnown RBP18.93■□□□□ 0.62
Stag1-206ENSMUST00000129269 Ccdc18Q640L5 1455 aa18.92■□□□□ 0.62
Stag1-206ENSMUST00000129269 Arid3cA6PWV5 409 aa18.92■□□□□ 0.62
Stag1-206ENSMUST00000129269 Setd5Q5XJV7 1441 aa18.92■□□□□ 0.62
Stag1-206ENSMUST00000129269 Rgl3Q3UYI5 709 aa18.91■□□□□ 0.62
Stag1-206ENSMUST00000129269 Cep164Q5DU05 1446 aa18.91■□□□□ 0.62
Retrieved 100 of 22,080 RNA–protein pairs in 21.8 ms