RNA–Protein interactions for RNA: ENSMUST00000110301.1

Clcn3-204, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Clcn3, Length 4,099 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-204ENSMUST00000110301 Vpreb3D3Z6J4 130 aa8.79□□□□□ -1
Clcn3-204ENSMUST00000110301 Spink8Q09TK9 105 aa8.79□□□□□ -1
Clcn3-204ENSMUST00000110301 Igkv1-110A0A0B4J1I0 119 aa8.78□□□□□ -1
Clcn3-204ENSMUST00000110301 Sprr2jO70561 109 aa8.77□□□□□ -1.01
Clcn3-204ENSMUST00000110301 Elof1P60003 83 aa8.77□□□□□ -1.01
Clcn3-204ENSMUST00000110301 Fbn1Q61554 2873 aaKnown RBP8.77□□□□□ -1.01
Clcn3-204ENSMUST00000110301 7530416G11RikJ3QJX6 159 aa8.75□□□□□ -1.01
Clcn3-204ENSMUST00000110301 Tenm1Q9WTS4 2731 aa8.75□□□□□ -1.01
Clcn3-204ENSMUST00000110301 Igkv8-27A0A0G2JF28 120 aa8.75□□□□□ -1.01
Clcn3-204ENSMUST00000110301 Igkv8-30A0A140T8M3 121 aa8.75□□□□□ -1.01
Clcn3-204ENSMUST00000110301 Znf414Q9DCK4 299 aa8.74□□□□□ -1.01
Clcn3-204ENSMUST00000110301 Igkv3-7A0A0G2JE31 119 aa8.73□□□□□ -1.01
Clcn3-204ENSMUST00000110301 Spint4Q9D263 159 aa8.73□□□□□ -1.01
Clcn3-204ENSMUST00000110301 Igkv3-3A0A140T8Q0 119 aa8.72□□□□□ -1.01
Clcn3-204ENSMUST00000110301 1700018G05RikA0A1B0GSI2 66 aa8.72□□□□□ -1.01
Clcn3-204ENSMUST00000110301 Prol1E9PYQ4 312 aa8.72□□□□□ -1.01
Clcn3-204ENSMUST00000110301 Cox6a2P43023 97 aa8.72□□□□□ -1.01
Clcn3-204ENSMUST00000110301 Defb13Q8R2I4 64 aa8.72□□□□□ -1.01
Clcn3-204ENSMUST00000110301 Vpreb2P13373 142 aa8.71□□□□□ -1.01
Clcn3-204ENSMUST00000110301 Krtap16-1A2A5X5 502 aa8.7□□□□□ -1.02
Clcn3-204ENSMUST00000110301 Smim29Q8R043 75 aa8.7□□□□□ -1.02
Clcn3-204ENSMUST00000110301 Gm28230A0A0A0MQ91 144 aa8.7□□□□□ -1.02
Clcn3-204ENSMUST00000110301 Gm10770F7D043 238 aa8.7□□□□□ -1.02
Clcn3-204ENSMUST00000110301 AW011738F6S7Q2 159 aa8.7□□□□□ -1.02
Clcn3-204ENSMUST00000110301 Znf706Q9D115 76 aaKnown RBP8.7□□□□□ -1.02
Clcn3-204ENSMUST00000110301 Igkv8-21A0A140T8P7 120 aa8.7□□□□□ -1.02
Clcn3-204ENSMUST00000110301 Defb39Q70KL3 74 aa8.69□□□□□ -1.02
Clcn3-204ENSMUST00000110301 Wfdc3Q14AE4 130 aa8.69□□□□□ -1.02
Clcn3-204ENSMUST00000110301 Gm5617Q91VN2 117 aa8.68□□□□□ -1.02
Clcn3-204ENSMUST00000110301 Csmd2V9GX34 3611 aa8.67□□□□□ -1.02
Clcn3-204ENSMUST00000110301 Col7a1Q63870 2944 aa8.67□□□□□ -1.02
Clcn3-204ENSMUST00000110301 Ighv2-2A0A075B5P8 116 aa8.65□□□□□ -1.03
Clcn3-204ENSMUST00000110301 Ighv2-5A0A0A6YY69 116 aa8.65□□□□□ -1.03
Clcn3-204ENSMUST00000110301 P01821 116 aa8.65□□□□□ -1.03
Clcn3-204ENSMUST00000110301 P84750 121 aa8.65□□□□□ -1.03
Clcn3-204ENSMUST00000110301 Reg3aO09037 175 aa8.64□□□□□ -1.03
Clcn3-204ENSMUST00000110301 Gm44790A0A0N4SV91 103 aa8.64□□□□□ -1.03
Clcn3-204ENSMUST00000110301 CnbpP53996 178 aaKnown RBP8.63□□□□□ -1.03
Clcn3-204ENSMUST00000110301 C130032M10RikQ8C888 123 aa8.63□□□□□ -1.03
Clcn3-204ENSMUST00000110301 Ndufc1Q9CQY9 76 aa8.63□□□□□ -1.03
Clcn3-204ENSMUST00000110301 TgO08710 2766 aa8.63□□□□□ -1.03
Clcn3-204ENSMUST00000110301 Defb9Q8R2I6 67 aa8.63□□□□□ -1.03
Clcn3-204ENSMUST00000110301 Mrpl34Q99N91 92 aa8.62□□□□□ -1.03
Clcn3-204ENSMUST00000110301 Gm21886J3QJU9 214 aa8.61□□□□□ -1.03
Clcn3-204ENSMUST00000110301 Defb38Q7TNV7 63 aa8.61□□□□□ -1.03
Clcn3-204ENSMUST00000110301 UqcrqQ9CQ69 82 aa8.61□□□□□ -1.03
Clcn3-204ENSMUST00000110301 Gm9507D3Z5T3 223 aa8.59□□□□□ -1.03
Clcn3-204ENSMUST00000110301 Gm10320E9PW43 113 aa8.59□□□□□ -1.03
Clcn3-204ENSMUST00000110301 Gm10267M0QWD8 85 aa8.59□□□□□ -1.03
Clcn3-204ENSMUST00000110301 Q8BT88 171 aa8.59□□□□□ -1.03
Clcn3-204ENSMUST00000110301 A0A286YE49 62 aa8.59□□□□□ -1.04
Clcn3-204ENSMUST00000110301 Fam19a3Q7TPG6 132 aa8.58□□□□□ -1.04
Clcn3-204ENSMUST00000110301 AI606181Q8C7B9 129 aa8.57□□□□□ -1.04
Clcn3-204ENSMUST00000110301 Gm17689B3GLJ4 109 aa8.57□□□□□ -1.04
Clcn3-204ENSMUST00000110301 Igkv8-28A0A0G2JE47 121 aa8.56□□□□□ -1.04
Clcn3-204ENSMUST00000110301 RetnlbQ99P86 105 aa8.56□□□□□ -1.04
Clcn3-204ENSMUST00000110301 1700074P13RikQ9D9G7 251 aa8.56□□□□□ -1.04
Clcn3-204ENSMUST00000110301 Anapc11Q9CPX9 84 aa8.54□□□□□ -1.04
Clcn3-204ENSMUST00000110301 Gm27235Q3UW50 83 aa8.54□□□□□ -1.04
Clcn3-204ENSMUST00000110301 A930002H24RikQ8C8Y3 163 aa8.54□□□□□ -1.04
Clcn3-204ENSMUST00000110301 VwfQ8CIZ8 2813 aa8.53□□□□□ -1.04
Clcn3-204ENSMUST00000110301 Gm7276Q3TYW4 209 aa8.52□□□□□ -1.05
Clcn3-204ENSMUST00000110301 Chchd10Q7TNL9 138 aa8.51□□□□□ -1.05
Clcn3-204ENSMUST00000110301 Spaca4Q80ZQ0 127 aa8.51□□□□□ -1.05
Clcn3-204ENSMUST00000110301 Zcchc13Q9D548 170 aa8.5□□□□□ -1.05
Clcn3-204ENSMUST00000110301 Gpr15lA0A0B4J1N3 78 aa8.49□□□□□ -1.05
Clcn3-204ENSMUST00000110301 Rpl37aP61514 92 aa8.49□□□□□ -1.05
Clcn3-204ENSMUST00000110301 A330070K13RikQ8CA53 115 aa8.49□□□□□ -1.05
Clcn3-204ENSMUST00000110301 Atox1O08997 68 aaKnown RBP8.49□□□□□ -1.05
Clcn3-204ENSMUST00000110301 Gm10308Q9CVR5 141 aa8.46□□□□□ -1.05
Clcn3-204ENSMUST00000110301 Gm10160F6Y577 67 aa8.45□□□□□ -1.06
Clcn3-204ENSMUST00000110301 Sprr1aQ62266 144 aa8.45□□□□□ -1.06
Clcn3-204ENSMUST00000110301 Fam229bQ8CF36 80 aa8.45□□□□□ -1.06
Clcn3-204ENSMUST00000110301 Fam104aA2A6P4 185 aa8.45□□□□□ -1.06
Clcn3-204ENSMUST00000110301 Gm10197F6QEY5 67 aa8.44□□□□□ -1.06
Clcn3-204ENSMUST00000110301 1700042G07RikB1AUF7 90 aa8.43□□□□□ -1.06
Clcn3-204ENSMUST00000110301 Cystm1Q8K353 104 aa8.43□□□□□ -1.06
Clcn3-204ENSMUST00000110301 Igkv8-19A0A0G2JFN8 121 aa8.42□□□□□ -1.06
Clcn3-204ENSMUST00000110301 Krtap10-4Q08EG8 221 aa8.42□□□□□ -1.06
Clcn3-204ENSMUST00000110301 Gm10570F6VB42 170 aa8.42□□□□□ -1.06
Clcn3-204ENSMUST00000110301 2310061N02RikQ9D6S9 174 aa8.41□□□□□ -1.06
Clcn3-204ENSMUST00000110301 Gm10065F6TJM2 114 aa8.39□□□□□ -1.07
Clcn3-204ENSMUST00000110301 Ank2Q8C8R3 3898 aa8.39□□□□□ -1.07
Clcn3-204ENSMUST00000110301 2310050C09RikG5E8Z3 280 aa8.37□□□□□ -1.07
Clcn3-204ENSMUST00000110301 6030445D17RikE9Q8F9 148 aa8.32□□□□□ -1.08
Clcn3-204ENSMUST00000110301 NbdyA0A0N4SUI7 68 aa8.32□□□□□ -1.08
Clcn3-204ENSMUST00000110301 Coa6Q8BGD8 79 aa8.32□□□□□ -1.08
Clcn3-204ENSMUST00000110301 Gm26620Q9CY65 116 aa8.32□□□□□ -1.08
Clcn3-204ENSMUST00000110301 Muc6Q80T03 2850 aa8.31□□□□□ -1.08
Clcn3-204ENSMUST00000110301 CubnQ9JLB4 3623 aa8.31□□□□□ -1.08
Clcn3-204ENSMUST00000110301 SptssbQ925E8 76 aa8.3□□□□□ -1.08
Clcn3-204ENSMUST00000110301 Ndufs5Q99LY9 106 aa8.3□□□□□ -1.08
Clcn3-204ENSMUST00000110301 Tenm2Q9WTS5 2764 aa8.3□□□□□ -1.08
Clcn3-204ENSMUST00000110301 Krtap13O88375 197 aa8.28□□□□□ -1.08
Clcn3-204ENSMUST00000110301 Gm12216A0A1W2P827 62 aa8.25□□□□□ -1.09
Clcn3-204ENSMUST00000110301 Krtap10-10A0A1W2P7T6 217 aa8.24□□□□□ -1.09
Clcn3-204ENSMUST00000110301 A730071L15RikQ8C4X0 137 aa8.24□□□□□ -1.09
Clcn3-204ENSMUST00000110301 LystP97412 3788 aa8.23□□□□□ -1.09
Clcn3-204ENSMUST00000110301 Gm10643Q3URG9 111 aa8.22□□□□□ -1.09
Clcn3-204ENSMUST00000110301 Gm10139O88245 57 aa8.21□□□□□ -1.09
Retrieved 100 of 22,080 RNA–protein pairs in 94.1 ms