RNA–Protein interactions for RNA: ENSMUST00000092971.12

Chd3-201, Transcript of Chromodomain helicase DNA-binding protein 3, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Chd3, Length 6,066 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Chd3-201ENSMUST00000092971 UtrnE9Q6R7 3430 aa9.25□□□□□ -0.93
Chd3-201ENSMUST00000092971 Cep350E9Q309 3095 aa9.25□□□□□ -0.93
Chd3-201ENSMUST00000092971 Gm37013Q8K491 104 aa9.24□□□□□ -0.93
Chd3-201ENSMUST00000092971 Fam229aB2KGE5 128 aa9.23□□□□□ -0.93
Chd3-201ENSMUST00000092971 Gm10065F6TJM2 114 aa9.23□□□□□ -0.93
Chd3-201ENSMUST00000092971 Akap13E9Q394 2776 aa9.23□□□□□ -0.93
Chd3-201ENSMUST00000092971 Odf3bQ5M8M2 238 aa9.21□□□□□ -0.94
Chd3-201ENSMUST00000092971 FlnaQ8BTM8 2647 aaKnown RBP9.19□□□□□ -0.94
Chd3-201ENSMUST00000092971 Gm10139O88245 57 aa9.16□□□□□ -0.94
Chd3-201ENSMUST00000092971 Romo1P60603 79 aa9.15□□□□□ -0.94
Chd3-201ENSMUST00000092971 Bod1lE9Q6J5 3032 aa9.15□□□□□ -0.94
Chd3-201ENSMUST00000092971 Lama3Q61789 3330 aa9.15□□□□□ -0.94
Chd3-201ENSMUST00000092971 Rpl37Q9D823 97 aa9.14□□□□□ -0.95
Chd3-201ENSMUST00000092971 Gm36176A0A1W2P8D5 158 aa9.13□□□□□ -0.95
Chd3-201ENSMUST00000092971 Gm10382Q3V0T5 144 aa9.1□□□□□ -0.95
Chd3-201ENSMUST00000092971 Gm17349F7BGH6 99 aa9.1□□□□□ -0.95
Chd3-201ENSMUST00000092971 Kmt2bO08550 2713 aa9.1□□□□□ -0.95
Chd3-201ENSMUST00000092971 Krtap13O88375 197 aa9.06□□□□□ -0.96
Chd3-201ENSMUST00000092971 Gm19426M0QWC7 77 aa9.05□□□□□ -0.96
Chd3-201ENSMUST00000092971 Lama2Q60675 3118 aaKnown RBP9.04□□□□□ -0.96
Chd3-201ENSMUST00000092971 A730071L15RikQ8C4X0 137 aa9.03□□□□□ -0.96
Chd3-201ENSMUST00000092971 Stab1Q8R4Y4 2571 aa9.01□□□□□ -0.97
Chd3-201ENSMUST00000092971 Gm16253D3Z167 63 aa9□□□□□ -0.97
Chd3-201ENSMUST00000092971 Gm9195A0A140LHT4 2805 aa8.99□□□□□ -0.97
Chd3-201ENSMUST00000092971 Sec61bQ9CQS8 96 aaKnown RBP8.99□□□□□ -0.97
Chd3-201ENSMUST00000092971 Mast4Q811L6 2618 aa8.99□□□□□ -0.97
Chd3-201ENSMUST00000092971 Sprr1aQ62266 144 aa8.98□□□□□ -0.97
Chd3-201ENSMUST00000092971 Hectd1Q69ZR2 2618 aaKnown RBP8.98□□□□□ -0.97
Chd3-201ENSMUST00000092971 BC029722A0A0N4SW31 51 aa8.97□□□□□ -0.97
Chd3-201ENSMUST00000092971 Gm9507D3Z5T3 223 aa8.92□□□□□ -0.98
Chd3-201ENSMUST00000092971 Gm5767A0A0J9YTU8 78 aa8.91□□□□□ -0.98
Chd3-201ENSMUST00000092971 Ubr5Q80TP3 2792 aa8.91□□□□□ -0.98
Chd3-201ENSMUST00000092971 Ash1lQ99MY8 2958 aa8.9□□□□□ -0.98
Chd3-201ENSMUST00000092971 Krtap10-4Q08EG8 221 aa8.9□□□□□ -0.98
Chd3-201ENSMUST00000092971 Mki67E9PVX6 3177 aaKnown RBP8.9□□□□□ -0.98
Chd3-201ENSMUST00000092971 2310050C09RikG5E8Z3 280 aa8.89□□□□□ -0.99
Chd3-201ENSMUST00000092971 Map1aQ9QYR6 2776 aa8.89□□□□□ -0.99
Chd3-201ENSMUST00000092971 1700042G07RikB1AUF7 90 aa8.89□□□□□ -0.99
Chd3-201ENSMUST00000092971 Ranbp2Q9ERU9 3053 aaKnown RBP8.89□□□□□ -0.99
Chd3-201ENSMUST00000092971 NipblQ6KCD5 2798 aaKnown RBP8.83□□□□□ -1
Chd3-201ENSMUST00000092971 Frem2Q6NVD0 3160 aa8.83□□□□□ -1
Chd3-201ENSMUST00000092971 4933415A04RikQ9D443 101 aa8.83□□□□□ -1
Chd3-201ENSMUST00000092971 Col12a1Q60847 3120 aa8.83□□□□□ -1
Chd3-201ENSMUST00000092971 Dmxl1Q6PNC0 3013 aa8.81□□□□□ -1
Chd3-201ENSMUST00000092971 Gm7173A0A0G2JEB6 3132 aa8.81□□□□□ -1
Chd3-201ENSMUST00000092971 Krtap10-10A0A1W2P7T6 217 aa8.8□□□□□ -1
Chd3-201ENSMUST00000092971 Tep1P97499 2629 aa8.79□□□□□ -1
Chd3-201ENSMUST00000092971 Chd6A3KFM7 2711 aa8.79□□□□□ -1
Chd3-201ENSMUST00000092971 9530053A07RikE9PVG8 2581 aa8.78□□□□□ -1
Chd3-201ENSMUST00000092971 Krtap29-1A2A5X4 342 aa8.77□□□□□ -1.01
Chd3-201ENSMUST00000092971 Ndufaf8A2AMZ4 74 aa8.76□□□□□ -1.01
Chd3-201ENSMUST00000092971 Cfap54Q8C6S9 3106 aa8.76□□□□□ -1.01
Chd3-201ENSMUST00000092971 HttP42859 3119 aa8.75□□□□□ -1.01
Chd3-201ENSMUST00000092971 Nbeal2Q6ZQA0 2742 aa8.72□□□□□ -1.01
Chd3-201ENSMUST00000092971 Itpr3P70227 2670 aa8.71□□□□□ -1.01
Chd3-201ENSMUST00000092971 Itpr1P11881 2749 aa8.71□□□□□ -1.02
Chd3-201ENSMUST00000092971 Igsf10Q3V1M1 2594 aa8.65□□□□□ -1.02
Chd3-201ENSMUST00000092971 Fbn2Q61555 2907 aa8.63□□□□□ -1.03
Chd3-201ENSMUST00000092971 MgaA2AWL7 3003 aaKnown RBP8.62□□□□□ -1.03
Chd3-201ENSMUST00000092971 Unc80Q8BLN6 3261 aa8.62□□□□□ -1.03
Chd3-201ENSMUST00000092971 BptfA2A654 3036 aaKnown RBP8.62□□□□□ -1.03
Chd3-201ENSMUST00000092971 Stab2Q8R4U0 2559 aa8.62□□□□□ -1.03
Chd3-201ENSMUST00000092971 Pkd1l1Q8R526 2615 aa8.62□□□□□ -1.03
Chd3-201ENSMUST00000092971 Krtap14O08640 167 aa8.62□□□□□ -1.03
Chd3-201ENSMUST00000092971 SmcpP15265 143 aa8.58□□□□□ -1.04
Chd3-201ENSMUST00000092971 Gm11565A2A4M7 156 aa8.57□□□□□ -1.04
Chd3-201ENSMUST00000092971 Usp34Q6ZQ93 3582 aa8.56□□□□□ -1.04
Chd3-201ENSMUST00000092971 Chd7A2AJK6 2986 aaKnown RBP8.55□□□□□ -1.04
Chd3-201ENSMUST00000092971 Gm21887J3QQ04 176 aa8.54□□□□□ -1.04
Chd3-201ENSMUST00000092971 AtmQ62388 3066 aa8.54□□□□□ -1.04
Chd3-201ENSMUST00000092971 Rev3lQ61493 3122 aa8.54□□□□□ -1.04
Chd3-201ENSMUST00000092971 Gm2310J3QNJ2 377 aa8.53□□□□□ -1.04
Chd3-201ENSMUST00000092971 Cox6b2Q80ZN9 88 aa8.53□□□□□ -1.04
Chd3-201ENSMUST00000092971 Vps13aQ5H8C4 3166 aa8.52□□□□□ -1.05
Chd3-201ENSMUST00000092971 Celsr1O35161 3034 aa8.51□□□□□ -1.05
Chd3-201ENSMUST00000092971 Gm9112A2AI92 75 aa8.5□□□□□ -1.05
Chd3-201ENSMUST00000092971 Gm2696A0A1W2P709 240 aa8.47□□□□□ -1.05
Chd3-201ENSMUST00000092971 Cdh23Q99PF4 3354 aa8.47□□□□□ -1.05
Chd3-201ENSMUST00000092971 Tex15F8VPN2 2785 aa8.45□□□□□ -1.06
Chd3-201ENSMUST00000092971 KalrnA2CG49 2964 aa8.45□□□□□ -1.06
Chd3-201ENSMUST00000092971 AspmQ8CJ27 3122 aa8.45□□□□□ -1.06
Chd3-201ENSMUST00000092971 2310057N15RikQ9D6T8 200 aa8.44□□□□□ -1.06
Chd3-201ENSMUST00000092971 Tnrc18Q80WC3 2878 aa8.42□□□□□ -1.06
Chd3-201ENSMUST00000092971 Celsr3Q91ZI0 3301 aa8.42□□□□□ -1.06
Chd3-201ENSMUST00000092971 Col6a5A6H584 2640 aa8.39□□□□□ -1.07
Chd3-201ENSMUST00000092971 D6Ertd527eA0A0N4SWI3 464 aa8.39□□□□□ -1.07
Chd3-201ENSMUST00000092971 Gm5965D3Z724 196 aa8.35□□□□□ -1.07
Chd3-201ENSMUST00000092971 2310061N02RikQ9D6S9 174 aa8.34□□□□□ -1.07
Chd3-201ENSMUST00000092971 Tnp2P11378 117 aa8.34□□□□□ -1.07
Chd3-201ENSMUST00000092971 DspE9Q557 2883 aaKnown RBP8.33□□□□□ -1.08
Chd3-201ENSMUST00000092971 Myo15bI7HPW8 3033 aa8.32□□□□□ -1.08
Chd3-201ENSMUST00000092971 Tnp1P10856 55 aa8.31□□□□□ -1.08
Chd3-201ENSMUST00000092971 Hivep1Q03172 2688 aa8.3□□□□□ -1.08
Chd3-201ENSMUST00000092971 Muc2Q80Z19 2680 aa8.28□□□□□ -1.08
Chd3-201ENSMUST00000092971 Utp20Q5XG71 2788 aaKnown RBP8.26□□□□□ -1.09
Chd3-201ENSMUST00000092971 Lama1P19137 3084 aa8.24□□□□□ -1.09
Chd3-201ENSMUST00000092971 FryE9Q8I9 3020 aa8.23□□□□□ -1.09
Chd3-201ENSMUST00000092971 FrylF8VQ05 3007 aa8.23□□□□□ -1.09
Chd3-201ENSMUST00000092971 FcgbpE9Q0B5 2583 aa8.21□□□□□ -1.09
Chd3-201ENSMUST00000092971 Rps29P62274 56 aa8.21□□□□□ -1.09
Retrieved 100 of 22,080 RNA–protein pairs in 50.5 ms