RNA–Protein interactions for RNA: ENSMUST00000088716.11

Smarcc1-201, Transcript of SWI/SNF complex subunit SMARCC1, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Smarcc1, Length 5,717 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc1-201ENSMUST00000088716 Fam229aB2KGE5 128 aa13,01□□□□□ -0,33
Smarcc1-201ENSMUST00000088716 A730071L15RikQ8C4X0 137 aa13□□□□□ -0,33
Smarcc1-201ENSMUST00000088716 PcntP48725 2898 aa12,98□□□□□ -0,33
Smarcc1-201ENSMUST00000088716 Dnah12Q3V0Q1 3086 aa12,97□□□□□ -0,33
Smarcc1-201ENSMUST00000088716 Hectd1Q69ZR2 2618 aaKnown RBP12,96□□□□□ -0,33
Smarcc1-201ENSMUST00000088716 Krtap29-1A2A5X4 342 aa12,94□□□□□ -0,34
Smarcc1-201ENSMUST00000088716 Camk2n1Q6QWF9 78 aa12,92□□□□□ -0,34
Smarcc1-201ENSMUST00000088716 HrnrQ8VHD8 2496 aa12,92□□□□□ -0,34
Smarcc1-201ENSMUST00000088716 Ep400Q8CHI8 3072 aaKnown RBP12,88□□□□□ -0,35
Smarcc1-201ENSMUST00000088716 Sec61bQ9CQS8 96 aaKnown RBP12,88□□□□□ -0,35
Smarcc1-201ENSMUST00000088716 Notch1Q01705 2531 aa12,88□□□□□ -0,35
Smarcc1-201ENSMUST00000088716 Prune2Q52KR3 3084 aa12,83□□□□□ -0,36
Smarcc1-201ENSMUST00000088716 Gm5767A0A0J9YTU8 78 aa12,81□□□□□ -0,36
Smarcc1-201ENSMUST00000088716 Stab1Q8R4Y4 2571 aa12,8□□□□□ -0,36
Smarcc1-201ENSMUST00000088716 Gm3646F6S692 53 aa12,79□□□□□ -0,36
Smarcc1-201ENSMUST00000088716 Prrc2cQ3TLH4 2846 aaKnown RBP12,7□□□□□ -0,38
Smarcc1-201ENSMUST00000088716 2310050C09RikG5E8Z3 280 aa12,7□□□□□ -0,38
Smarcc1-201ENSMUST00000088716 Rpl37Q9D823 97 aa12,7□□□□□ -0,38
Smarcc1-201ENSMUST00000088716 Krtap13O88375 197 aa12,69□□□□□ -0,38
Smarcc1-201ENSMUST00000088716 Cep350E9Q309 3095 aa12,67□□□□□ -0,38
Smarcc1-201ENSMUST00000088716 UtrnE9Q6R7 3430 aa12,64□□□□□ -0,39
Smarcc1-201ENSMUST00000088716 Romo1P60603 79 aa12,63□□□□□ -0,39
Smarcc1-201ENSMUST00000088716 Gm9507D3Z5T3 223 aa12,62□□□□□ -0,39
Smarcc1-201ENSMUST00000088716 BC029722A0A0N4SW31 51 aa12,61□□□□□ -0,39
Smarcc1-201ENSMUST00000088716 Jbts17Q8CE72 3214 aa12,6□□□□□ -0,39
Smarcc1-201ENSMUST00000088716 NipblQ6KCD5 2798 aaKnown RBP12,59□□□□□ -0,39
Smarcc1-201ENSMUST00000088716 Gm19426M0QWC7 77 aa12,59□□□□□ -0,39
Smarcc1-201ENSMUST00000088716 Akap13E9Q394 2776 aa12,59□□□□□ -0,39
Smarcc1-201ENSMUST00000088716 Kmt2bO08550 2713 aa12,58□□□□□ -0,4
Smarcc1-201ENSMUST00000088716 TrioQ0KL02 3102 aa12,5□□□□□ -0,41
Smarcc1-201ENSMUST00000088716 Mast4Q811L6 2618 aa12,49□□□□□ -0,41
Smarcc1-201ENSMUST00000088716 Krtap14O08640 167 aa12,49□□□□□ -0,41
Smarcc1-201ENSMUST00000088716 Itpr3P70227 2670 aa12,46□□□□□ -0,41
Smarcc1-201ENSMUST00000088716 Itpr1P11881 2749 aa12,46□□□□□ -0,41
Smarcc1-201ENSMUST00000088716 Gm10382Q3V0T5 144 aa12,45□□□□□ -0,42
Smarcc1-201ENSMUST00000088716 2310061N02RikQ9D6S9 174 aa12,44□□□□□ -0,42
Smarcc1-201ENSMUST00000088716 Bod1lE9Q6J5 3032 aa12,44□□□□□ -0,42
Smarcc1-201ENSMUST00000088716 Map1aQ9QYR6 2776 aa12,43□□□□□ -0,42
Smarcc1-201ENSMUST00000088716 Gm2310J3QNJ2 377 aa12,43□□□□□ -0,42
Smarcc1-201ENSMUST00000088716 Igsf10Q3V1M1 2594 aa12,41□□□□□ -0,42
Smarcc1-201ENSMUST00000088716 Krtap10-4Q08EG8 221 aa12,41□□□□□ -0,42
Smarcc1-201ENSMUST00000088716 4933415A04RikQ9D443 101 aa12,41□□□□□ -0,42
Smarcc1-201ENSMUST00000088716 Rps29P62274 56 aa12,38□□□□□ -0,43
Smarcc1-201ENSMUST00000088716 Tnrc18Q80WC3 2878 aa12,36□□□□□ -0,43
Smarcc1-201ENSMUST00000088716 Tep1P97499 2629 aa12,33□□□□□ -0,44
Smarcc1-201ENSMUST00000088716 1700042G07RikB1AUF7 90 aa12,28□□□□□ -0,44
Smarcc1-201ENSMUST00000088716 Chd7A2AJK6 2986 aaKnown RBP12,28□□□□□ -0,44
Smarcc1-201ENSMUST00000088716 MgaA2AWL7 3003 aaKnown RBP12,27□□□□□ -0,44
Smarcc1-201ENSMUST00000088716 Myo15bI7HPW8 3033 aa12,27□□□□□ -0,45
Smarcc1-201ENSMUST00000088716 Tnp2P11378 117 aa12,27□□□□□ -0,45
Smarcc1-201ENSMUST00000088716 Col12a1Q60847 3120 aa12,27□□□□□ -0,45
Smarcc1-201ENSMUST00000088716 Ubr5Q80TP3 2792 aa12,26□□□□□ -0,45
Smarcc1-201ENSMUST00000088716 9530053A07RikE9PVG8 2581 aa12,26□□□□□ -0,45
Smarcc1-201ENSMUST00000088716 Krtap10-10A0A1W2P7T6 217 aa12,25□□□□□ -0,45
Smarcc1-201ENSMUST00000088716 Lama3Q61789 3330 aa12,23□□□□□ -0,45
Smarcc1-201ENSMUST00000088716 Chd6A3KFM7 2711 aa12,21□□□□□ -0,45
Smarcc1-201ENSMUST00000088716 Cox6b2Q80ZN9 88 aa12,17□□□□□ -0,46
Smarcc1-201ENSMUST00000088716 Ash1lQ99MY8 2958 aa12,17□□□□□ -0,46
Smarcc1-201ENSMUST00000088716 Stab2Q8R4U0 2559 aa12,17□□□□□ -0,46
Smarcc1-201ENSMUST00000088716 Lama2Q60675 3118 aaKnown RBP12,15□□□□□ -0,46
Smarcc1-201ENSMUST00000088716 Dmxl1Q6PNC0 3013 aa12,15□□□□□ -0,46
Smarcc1-201ENSMUST00000088716 Fbn2Q61555 2907 aa12,15□□□□□ -0,46
Smarcc1-201ENSMUST00000088716 Nbeal2Q6ZQA0 2742 aa12,1□□□□□ -0,47
Smarcc1-201ENSMUST00000088716 Rev3lQ61493 3122 aa12,08□□□□□ -0,48
Smarcc1-201ENSMUST00000088716 Mki67E9PVX6 3177 aaKnown RBP12,07□□□□□ -0,48
Smarcc1-201ENSMUST00000088716 Gm7173A0A0G2JEB6 3132 aa12,05□□□□□ -0,48
Smarcc1-201ENSMUST00000088716 SmcpP15265 143 aa12,04□□□□□ -0,48
Smarcc1-201ENSMUST00000088716 Pkd1l1Q8R526 2615 aa11,99□□□□□ -0,49
Smarcc1-201ENSMUST00000088716 D6Ertd527eA0A0N4SWI3 464 aa11,99□□□□□ -0,49
Smarcc1-201ENSMUST00000088716 KalrnA2CG49 2964 aa11,95□□□□□ -0,5
Smarcc1-201ENSMUST00000088716 Gm2696A0A1W2P709 240 aa11,94□□□□□ -0,5
Smarcc1-201ENSMUST00000088716 HttP42859 3119 aa11,94□□□□□ -0,5
Smarcc1-201ENSMUST00000088716 Muc2Q80Z19 2680 aa11,88□□□□□ -0,51
Smarcc1-201ENSMUST00000088716 Ranbp2Q9ERU9 3053 aaKnown RBP11,87□□□□□ -0,51
Smarcc1-201ENSMUST00000088716 Col6a5A6H584 2640 aa11,86□□□□□ -0,51
Smarcc1-201ENSMUST00000088716 Gm21887J3QQ04 176 aa11,8□□□□□ -0,52
Smarcc1-201ENSMUST00000088716 Usp34Q6ZQ93 3582 aa11,78□□□□□ -0,52
Smarcc1-201ENSMUST00000088716 Itpr2Q9Z329 2701 aa11,77□□□□□ -0,53
Smarcc1-201ENSMUST00000088716 Hivep1Q03172 2688 aa11,76□□□□□ -0,53
Smarcc1-201ENSMUST00000088716 FcgbpE9Q0B5 2583 aa11,75□□□□□ -0,53
Smarcc1-201ENSMUST00000088716 Gm5965D3Z724 196 aa11,71□□□□□ -0,53
Smarcc1-201ENSMUST00000088716 Celsr1O35161 3034 aa11,64□□□□□ -0,55
Smarcc1-201ENSMUST00000088716 2310057N15RikQ9D6T8 200 aa11,6□□□□□ -0,55
Smarcc1-201ENSMUST00000088716 Cfap54Q8C6S9 3106 aa11,59□□□□□ -0,55
Smarcc1-201ENSMUST00000088716 Cdh23Q99PF4 3354 aa11,59□□□□□ -0,55
Smarcc1-201ENSMUST00000088716 TgO08710 2766 aa11,58□□□□□ -0,56
Smarcc1-201ENSMUST00000088716 Tex15F8VPN2 2785 aa11,55□□□□□ -0,56
Smarcc1-201ENSMUST00000088716 Ndufaf8A2AMZ4 74 aa11,54□□□□□ -0,56
Smarcc1-201ENSMUST00000088716 Utp20Q5XG71 2788 aaKnown RBP11,52□□□□□ -0,57
Smarcc1-201ENSMUST00000088716 Srrm2Q8BTI8 2703 aaKnown RBP11,49□□□□□ -0,57
Smarcc1-201ENSMUST00000088716 Tnp1P10856 55 aa11,49□□□□□ -0,57
Smarcc1-201ENSMUST00000088716 Igfn1Q3KNY0 2849 aa11,45□□□□□ -0,58
Smarcc1-201ENSMUST00000088716 AspmQ8CJ27 3122 aa11,43□□□□□ -0,58
Smarcc1-201ENSMUST00000088716 Gm40193A0A1B0GT39 78 aa11,39□□□□□ -0,59
Smarcc1-201ENSMUST00000088716 AtmQ62388 3066 aa11,39□□□□□ -0,59
Smarcc1-201ENSMUST00000088716 BptfA2A654 3036 aaKnown RBP11,39□□□□□ -0,59
Smarcc1-201ENSMUST00000088716 Vps13aQ5H8C4 3166 aa11,38□□□□□ -0,59
Smarcc1-201ENSMUST00000088716 ApcQ61315 2845 aa11,36□□□□□ -0,59
Smarcc1-201ENSMUST00000088716 Tenm4Q3UHK6 2771 aa11,33□□□□□ -0,6
Smarcc1-201ENSMUST00000088716 Frem2Q6NVD0 3160 aa11,3□□□□□ -0,6
Retrieved 100 of 22,080 RNA–protein pairs in 43,4 ms