RNA–Protein interactions for RNA: ENSMUST00000082209.12

Scn8a-201, Transcript of Sodium channel protein type 8 subunit alpha, mousemouse

APPRIS ALT1 TSL 5 BASIC

Gene Scn8a, Length 11,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8a-201ENSMUST00000082209 Pla2g10Q9QXX3 151 aa6.57□□□□□ -1.36
Scn8a-201ENSMUST00000082209 Bod1lE9Q6J5 3032 aa6.57□□□□□ -1.36
Scn8a-201ENSMUST00000082209 BptfA2A654 3036 aaKnown RBP6.56□□□□□ -1.36
Scn8a-201ENSMUST00000082209 Fam229bQ8CF36 80 aa6.54□□□□□ -1.36
Scn8a-201ENSMUST00000082209 6030445D17RikE9Q8F9 148 aa6.53□□□□□ -1.36
Scn8a-201ENSMUST00000082209 Vps13aQ5H8C4 3166 aa6.53□□□□□ -1.36
Scn8a-201ENSMUST00000082209 Gm10139O88245 57 aa6.53□□□□□ -1.36
Scn8a-201ENSMUST00000082209 Col12a1Q60847 3120 aa6.52□□□□□ -1.37
Scn8a-201ENSMUST00000082209 Hectd1Q69ZR2 2618 aaKnown RBP6.52□□□□□ -1.37
Scn8a-201ENSMUST00000082209 Stab1Q8R4Y4 2571 aa6.52□□□□□ -1.37
Scn8a-201ENSMUST00000082209 Sprr1aQ62266 144 aa6.5□□□□□ -1.37
Scn8a-201ENSMUST00000082209 Gm7173A0A0G2JEB6 3132 aa6.5□□□□□ -1.37
Scn8a-201ENSMUST00000082209 Smim29Q8R043 75 aa6.49□□□□□ -1.37
Scn8a-201ENSMUST00000082209 Notch1Q01705 2531 aa6.49□□□□□ -1.37
Scn8a-201ENSMUST00000082209 Cfap54Q8C6S9 3106 aa6.49□□□□□ -1.37
Scn8a-201ENSMUST00000082209 Gm4491E0CX42 125 aa6.49□□□□□ -1.37
Scn8a-201ENSMUST00000082209 Gm16253D3Z167 63 aa6.47□□□□□ -1.37
Scn8a-201ENSMUST00000082209 Ash1lQ99MY8 2958 aa6.45□□□□□ -1.38
Scn8a-201ENSMUST00000082209 Anapc11Q9CPX9 84 aa6.45□□□□□ -1.38
Scn8a-201ENSMUST00000082209 HttP42859 3119 aa6.44□□□□□ -1.38
Scn8a-201ENSMUST00000082209 MgaA2AWL7 3003 aaKnown RBP6.44□□□□□ -1.38
Scn8a-201ENSMUST00000082209 FlnbQ80X90 2602 aaKnown RBP6.43□□□□□ -1.38
Scn8a-201ENSMUST00000082209 Itpr3P70227 2670 aa6.42□□□□□ -1.38
Scn8a-201ENSMUST00000082209 Itpr2Q9Z329 2701 aa6.41□□□□□ -1.38
Scn8a-201ENSMUST00000082209 Unc80Q8BLN6 3261 aa6.41□□□□□ -1.38
Scn8a-201ENSMUST00000082209 AtmQ62388 3066 aa6.4□□□□□ -1.38
Scn8a-201ENSMUST00000082209 Gm37013Q8K491 104 aa6.4□□□□□ -1.39
Scn8a-201ENSMUST00000082209 Gm10320E9PW43 113 aa6.39□□□□□ -1.39
Scn8a-201ENSMUST00000082209 A730071L15RikQ8C4X0 137 aa6.39□□□□□ -1.39
Scn8a-201ENSMUST00000082209 Celsr3Q91ZI0 3301 aa6.38□□□□□ -1.39
Scn8a-201ENSMUST00000082209 Krtap29-1A2A5X4 342 aa6.37□□□□□ -1.39
Scn8a-201ENSMUST00000082209 KalrnA2CG49 2964 aa6.37□□□□□ -1.39
Scn8a-201ENSMUST00000082209 Spink7Q6IE32 76 aa6.37□□□□□ -1.39
Scn8a-201ENSMUST00000082209 Gm3880A0A1B0GSB3 72 aa6.37□□□□□ -1.39
Scn8a-201ENSMUST00000082209 Fbn2Q61555 2907 aa6.37□□□□□ -1.39
Scn8a-201ENSMUST00000082209 Gm3250E9Q1M3 230 aa6.35□□□□□ -1.39
Scn8a-201ENSMUST00000082209 Tep1P97499 2629 aa6.34□□□□□ -1.39
Scn8a-201ENSMUST00000082209 ApcQ61315 2845 aa6.34□□□□□ -1.4
Scn8a-201ENSMUST00000082209 Itpr1P11881 2749 aa6.33□□□□□ -1.4
Scn8a-201ENSMUST00000082209 Rps29P62274 56 aa6.33□□□□□ -1.4
Scn8a-201ENSMUST00000082209 Fam229aB2KGE5 128 aa6.32□□□□□ -1.4
Scn8a-201ENSMUST00000082209 Gm3646F6S692 53 aa6.32□□□□□ -1.4
Scn8a-201ENSMUST00000082209 FrylF8VQ05 3007 aa6.32□□□□□ -1.4
Scn8a-201ENSMUST00000082209 Romo1P60603 79 aa6.32□□□□□ -1.4
Scn8a-201ENSMUST00000082209 Cystm1Q8K353 104 aa6.31□□□□□ -1.4
Scn8a-201ENSMUST00000082209 Sec61bQ9CQS8 96 aaKnown RBP6.3□□□□□ -1.4
Scn8a-201ENSMUST00000082209 Rpl37Q9D823 97 aa6.3□□□□□ -1.4
Scn8a-201ENSMUST00000082209 Szt2A2A9C3 3431 aa6.3□□□□□ -1.4
Scn8a-201ENSMUST00000082209 1700042G07RikB1AUF7 90 aa6.29□□□□□ -1.4
Scn8a-201ENSMUST00000082209 Myo15bI7HPW8 3033 aa6.28□□□□□ -1.4
Scn8a-201ENSMUST00000082209 FryE9Q8I9 3020 aa6.27□□□□□ -1.4
Scn8a-201ENSMUST00000082209 Utp20Q5XG71 2788 aaKnown RBP6.27□□□□□ -1.41
Scn8a-201ENSMUST00000082209 Camk2n1Q6QWF9 78 aa6.27□□□□□ -1.41
Scn8a-201ENSMUST00000082209 4933415A04RikQ9D443 101 aa6.26□□□□□ -1.41
Scn8a-201ENSMUST00000082209 Igsf10Q3V1M1 2594 aa6.25□□□□□ -1.41
Scn8a-201ENSMUST00000082209 Nbeal2Q6ZQA0 2742 aa6.24□□□□□ -1.41
Scn8a-201ENSMUST00000082209 9530053A07RikE9PVG8 2581 aa6.23□□□□□ -1.41
Scn8a-201ENSMUST00000082209 Zfhx3Q61329 3726 aa6.23□□□□□ -1.41
Scn8a-201ENSMUST00000082209 Col6a5A6H584 2640 aa6.23□□□□□ -1.41
Scn8a-201ENSMUST00000082209 Cox6b2Q80ZN9 88 aa6.22□□□□□ -1.41
Scn8a-201ENSMUST00000082209 Vps13cQ8BX70 3748 aa6.22□□□□□ -1.41
Scn8a-201ENSMUST00000082209 BC029722A0A0N4SW31 51 aa6.21□□□□□ -1.41
Scn8a-201ENSMUST00000082209 Gm5767A0A0J9YTU8 78 aa6.21□□□□□ -1.42
Scn8a-201ENSMUST00000082209 AspmQ8CJ27 3122 aa6.19□□□□□ -1.42
Scn8a-201ENSMUST00000082209 Muc2Q80Z19 2680 aa6.18□□□□□ -1.42
Scn8a-201ENSMUST00000082209 Frem2Q6NVD0 3160 aa6.18□□□□□ -1.42
Scn8a-201ENSMUST00000082209 Gm2310J3QNJ2 377 aa6.18□□□□□ -1.42
Scn8a-201ENSMUST00000082209 Wdfy4E9Q2M9 3149 aa6.17□□□□□ -1.42
Scn8a-201ENSMUST00000082209 Krtap15-1Q9QZU5 150 aa6.17□□□□□ -1.42
Scn8a-201ENSMUST00000082209 Mast4Q811L6 2618 aa6.17□□□□□ -1.42
Scn8a-201ENSMUST00000082209 Lelp1Q9DAE3 120 aa6.17□□□□□ -1.42
Scn8a-201ENSMUST00000082209 SmcpP15265 143 aa6.16□□□□□ -1.42
Scn8a-201ENSMUST00000082209 Lama1P19137 3084 aa6.15□□□□□ -1.42
Scn8a-201ENSMUST00000082209 Gm10382Q3V0T5 144 aa6.15□□□□□ -1.43
Scn8a-201ENSMUST00000082209 Celsr1O35161 3034 aa6.14□□□□□ -1.43
Scn8a-201ENSMUST00000082209 DspE9Q557 2883 aaKnown RBP6.13□□□□□ -1.43
Scn8a-201ENSMUST00000082209 NbeaQ9EPN1 2936 aa6.12□□□□□ -1.43
Scn8a-201ENSMUST00000082209 Adgrg4B7ZCC9 3073 aa6.12□□□□□ -1.43
Scn8a-201ENSMUST00000082209 Tex15F8VPN2 2785 aa6.11□□□□□ -1.43
Scn8a-201ENSMUST00000082209 Akap9Q70FJ1 3797 aa6.11□□□□□ -1.43
Scn8a-201ENSMUST00000082209 Lrrc37aB1AWG4 3215 aa6.11□□□□□ -1.43
Scn8a-201ENSMUST00000082209 Gm19426M0QWC7 77 aa6.11□□□□□ -1.43
Scn8a-201ENSMUST00000082209 Gm17349F7BGH6 99 aa6.09□□□□□ -1.43
Scn8a-201ENSMUST00000082209 Stab2Q8R4U0 2559 aa6.08□□□□□ -1.44
Scn8a-201ENSMUST00000082209 Brca2P97929 3329 aa6.08□□□□□ -1.44
Scn8a-201ENSMUST00000082209 Gm3233E9Q2H5 230 aa6.07□□□□□ -1.44
Scn8a-201ENSMUST00000082209 Ubr5Q80TP3 2792 aa6.06□□□□□ -1.44
Scn8a-201ENSMUST00000082209 Trank1Q8BV79 2999 aa6.06□□□□□ -1.44
Scn8a-201ENSMUST00000082209 Myo15aQ9QZZ4 3511 aa6.01□□□□□ -1.45
Scn8a-201ENSMUST00000082209 Dmxl2Q8BPN8 3032 aa6.01□□□□□ -1.45
Scn8a-201ENSMUST00000082209 Tnp2P11378 117 aa6□□□□□ -1.45
Scn8a-201ENSMUST00000082209 Srrm2Q8BTI8 2703 aaKnown RBP6□□□□□ -1.45
Scn8a-201ENSMUST00000082209 2310050C09RikG5E8Z3 280 aa5.99□□□□□ -1.45
Scn8a-201ENSMUST00000082209 Gm40193A0A1B0GT39 78 aa5.99□□□□□ -1.45
Scn8a-201ENSMUST00000082209 Gm7138L7N2C3 230 aa5.99□□□□□ -1.45
Scn8a-201ENSMUST00000082209 Gm3238W4VSP7 230 aa5.99□□□□□ -1.45
Scn8a-201ENSMUST00000082209 Zzef1Q5SSH7 2924 aa5.99□□□□□ -1.45
Scn8a-201ENSMUST00000082209 Pkd1l1Q8R526 2615 aa5.99□□□□□ -1.45
Scn8a-201ENSMUST00000082209 Wdfy3Q6VNB8 3508 aa5.98□□□□□ -1.45
Scn8a-201ENSMUST00000082209 TgO08710 2766 aa5.98□□□□□ -1.45
Retrieved 100 of 22,080 RNA–protein pairs in 70.2 ms