RNA–Protein interactions for RNA: ENSMUST00000064190.12

Rai1-201, Transcript of Retinoic acid-induced protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rai1, Length 7,348 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rai1-201ENSMUST00000064190 HttP42859 3119 aa9.88□□□□□ -0.83
Rai1-201ENSMUST00000064190 Lama2Q60675 3118 aaKnown RBP9.85□□□□□ -0.83
Rai1-201ENSMUST00000064190 Odf3bQ5M8M2 238 aa9.84□□□□□ -0.83
Rai1-201ENSMUST00000064190 Gm19426M0QWC7 77 aa9.83□□□□□ -0.84
Rai1-201ENSMUST00000064190 Rpl37Q9D823 97 aa9.82□□□□□ -0.84
Rai1-201ENSMUST00000064190 Col12a1Q60847 3120 aa9.82□□□□□ -0.84
Rai1-201ENSMUST00000064190 Mki67E9PVX6 3177 aaKnown RBP9.81□□□□□ -0.84
Rai1-201ENSMUST00000064190 Gm3646F6S692 53 aa9.81□□□□□ -0.84
Rai1-201ENSMUST00000064190 Gm10382Q3V0T5 144 aa9.8□□□□□ -0.84
Rai1-201ENSMUST00000064190 Gm37013Q8K491 104 aa9.8□□□□□ -0.84
Rai1-201ENSMUST00000064190 Sec61bQ9CQS8 96 aaKnown RBP9.77□□□□□ -0.85
Rai1-201ENSMUST00000064190 Fn1P11276 2477 aaKnown RBP9.76□□□□□ -0.85
Rai1-201ENSMUST00000064190 Gm10065F6TJM2 114 aa9.76□□□□□ -0.85
Rai1-201ENSMUST00000064190 Gm10320E9PW43 113 aa9.75□□□□□ -0.85
Rai1-201ENSMUST00000064190 Ranbp2Q9ERU9 3053 aaKnown RBP9.74□□□□□ -0.85
Rai1-201ENSMUST00000064190 Akap13E9Q394 2776 aa9.71□□□□□ -0.85
Rai1-201ENSMUST00000064190 CenpfE9Q3P4 2997 aaKnown RBP9.7□□□□□ -0.86
Rai1-201ENSMUST00000064190 Cdh23Q99PF4 3354 aa9.69□□□□□ -0.86
Rai1-201ENSMUST00000064190 BC029722A0A0N4SW31 51 aa9.68□□□□□ -0.86
Rai1-201ENSMUST00000064190 Cystm1Q8K353 104 aa9.68□□□□□ -0.86
Rai1-201ENSMUST00000064190 Ash1lQ99MY8 2958 aa9.66□□□□□ -0.86
Rai1-201ENSMUST00000064190 Lelp1Q9DAE3 120 aa9.63□□□□□ -0.87
Rai1-201ENSMUST00000064190 Gm10139O88245 57 aa9.62□□□□□ -0.87
Rai1-201ENSMUST00000064190 Rev3lQ61493 3122 aa9.62□□□□□ -0.87
Rai1-201ENSMUST00000064190 AtmQ62388 3066 aa9.61□□□□□ -0.87
Rai1-201ENSMUST00000064190 Gm17349F7BGH6 99 aa9.6□□□□□ -0.87
Rai1-201ENSMUST00000064190 Gm5767A0A0J9YTU8 78 aa9.57□□□□□ -0.88
Rai1-201ENSMUST00000064190 2310050C09RikG5E8Z3 280 aa9.57□□□□□ -0.88
Rai1-201ENSMUST00000064190 FlnaQ8BTM8 2647 aaKnown RBP9.56□□□□□ -0.88
Rai1-201ENSMUST00000064190 Notch1Q01705 2531 aa9.53□□□□□ -0.88
Rai1-201ENSMUST00000064190 Stab1Q8R4Y4 2571 aa9.53□□□□□ -0.88
Rai1-201ENSMUST00000064190 BptfA2A654 3036 aaKnown RBP9.52□□□□□ -0.89
Rai1-201ENSMUST00000064190 Celsr3Q91ZI0 3301 aa9.51□□□□□ -0.89
Rai1-201ENSMUST00000064190 Cfap54Q8C6S9 3106 aa9.51□□□□□ -0.89
Rai1-201ENSMUST00000064190 Vps13aQ5H8C4 3166 aa9.51□□□□□ -0.89
Rai1-201ENSMUST00000064190 Krtap13O88375 197 aa9.51□□□□□ -0.89
Rai1-201ENSMUST00000064190 Gm36176A0A1W2P8D5 158 aa9.5□□□□□ -0.89
Rai1-201ENSMUST00000064190 Prrc2cQ3TLH4 2846 aaKnown RBP9.49□□□□□ -0.89
Rai1-201ENSMUST00000064190 Unc80Q8BLN6 3261 aa9.48□□□□□ -0.89
Rai1-201ENSMUST00000064190 Gm16253D3Z167 63 aa9.46□□□□□ -0.89
Rai1-201ENSMUST00000064190 Ndufaf8A2AMZ4 74 aa9.45□□□□□ -0.9
Rai1-201ENSMUST00000064190 Gm9195A0A140LHT4 2805 aa9.45□□□□□ -0.9
Rai1-201ENSMUST00000064190 MgaA2AWL7 3003 aaKnown RBP9.43□□□□□ -0.9
Rai1-201ENSMUST00000064190 Itpr3P70227 2670 aa9.43□□□□□ -0.9
Rai1-201ENSMUST00000064190 Sprr1aQ62266 144 aa9.4□□□□□ -0.9
Rai1-201ENSMUST00000064190 Hectd1Q69ZR2 2618 aaKnown RBP9.39□□□□□ -0.91
Rai1-201ENSMUST00000064190 A730071L15RikQ8C4X0 137 aa9.37□□□□□ -0.91
Rai1-201ENSMUST00000064190 1700042G07RikB1AUF7 90 aa9.36□□□□□ -0.91
Rai1-201ENSMUST00000064190 Gm9507D3Z5T3 223 aa9.35□□□□□ -0.91
Rai1-201ENSMUST00000064190 Col6a3E9PWQ3 3284 aa9.35□□□□□ -0.91
Rai1-201ENSMUST00000064190 Gcn1E9PVA8 2671 aaKnown RBP9.34□□□□□ -0.91
Rai1-201ENSMUST00000064190 Dmxl1Q6PNC0 3013 aa9.33□□□□□ -0.92
Rai1-201ENSMUST00000064190 Igsf10Q3V1M1 2594 aa9.33□□□□□ -0.92
Rai1-201ENSMUST00000064190 Szt2A2A9C3 3431 aa9.31□□□□□ -0.92
Rai1-201ENSMUST00000064190 Krtap10-4Q08EG8 221 aa9.31□□□□□ -0.92
Rai1-201ENSMUST00000064190 Krtap29-1A2A5X4 342 aa9.3□□□□□ -0.92
Rai1-201ENSMUST00000064190 Map1aQ9QYR6 2776 aa9.29□□□□□ -0.92
Rai1-201ENSMUST00000064190 4933415A04RikQ9D443 101 aa9.27□□□□□ -0.93
Rai1-201ENSMUST00000064190 Gm21887J3QQ04 176 aa9.26□□□□□ -0.93
Rai1-201ENSMUST00000064190 Mast4Q811L6 2618 aa9.25□□□□□ -0.93
Rai1-201ENSMUST00000064190 AspmQ8CJ27 3122 aa9.24□□□□□ -0.93
Rai1-201ENSMUST00000064190 NipblQ6KCD5 2798 aaKnown RBP9.24□□□□□ -0.93
Rai1-201ENSMUST00000064190 Gm9112A2AI92 75 aa9.23□□□□□ -0.93
Rai1-201ENSMUST00000064190 Frem2Q6NVD0 3160 aa9.21□□□□□ -0.93
Rai1-201ENSMUST00000064190 Krtap10-10A0A1W2P7T6 217 aa9.19□□□□□ -0.94
Rai1-201ENSMUST00000064190 Lama1P19137 3084 aa9.16□□□□□ -0.94
Rai1-201ENSMUST00000064190 Cox6b2Q80ZN9 88 aa9.15□□□□□ -0.95
Rai1-201ENSMUST00000064190 Nbeal2Q6ZQA0 2742 aa9.15□□□□□ -0.95
Rai1-201ENSMUST00000064190 Fbn2Q61555 2907 aa9.12□□□□□ -0.95
Rai1-201ENSMUST00000064190 Celsr1O35161 3034 aa9.12□□□□□ -0.95
Rai1-201ENSMUST00000064190 Tnp1P10856 55 aa9.12□□□□□ -0.95
Rai1-201ENSMUST00000064190 Brca2P97929 3329 aa9.11□□□□□ -0.95
Rai1-201ENSMUST00000064190 Chd7A2AJK6 2986 aaKnown RBP9.11□□□□□ -0.95
Rai1-201ENSMUST00000064190 Ubr5Q80TP3 2792 aa9.1□□□□□ -0.95
Rai1-201ENSMUST00000064190 9530053A07RikE9PVG8 2581 aa9.09□□□□□ -0.95
Rai1-201ENSMUST00000064190 KalrnA2CG49 2964 aa9.09□□□□□ -0.95
Rai1-201ENSMUST00000064190 Zfhx3Q61329 3726 aa9.08□□□□□ -0.96
Rai1-201ENSMUST00000064190 Krtap14O08640 167 aa9.07□□□□□ -0.96
Rai1-201ENSMUST00000064190 Lrrc37aB1AWG4 3215 aa9.07□□□□□ -0.96
Rai1-201ENSMUST00000064190 FryE9Q8I9 3020 aa9.06□□□□□ -0.96
Rai1-201ENSMUST00000064190 2310057N15RikQ9D6T8 200 aa9.05□□□□□ -0.96
Rai1-201ENSMUST00000064190 Itpr1P11881 2749 aa9.04□□□□□ -0.96
Rai1-201ENSMUST00000064190 Tep1P97499 2629 aa9.04□□□□□ -0.96
Rai1-201ENSMUST00000064190 Gm11565A2A4M7 156 aa9.03□□□□□ -0.96
Rai1-201ENSMUST00000064190 Dchs1E9PVD3 3291 aa9.01□□□□□ -0.97
Rai1-201ENSMUST00000064190 Myo15aQ9QZZ4 3511 aa8.99□□□□□ -0.97
Rai1-201ENSMUST00000064190 Gm2310J3QNJ2 377 aa8.97□□□□□ -0.97
Rai1-201ENSMUST00000064190 Dmxl2Q8BPN8 3032 aa8.97□□□□□ -0.97
Rai1-201ENSMUST00000064190 Dchs2A0A0A6YW72 3346 aa8.96□□□□□ -0.98
Rai1-201ENSMUST00000064190 Wdfy4E9Q2M9 3149 aa8.96□□□□□ -0.98
Rai1-201ENSMUST00000064190 VcanQ62059 3357 aa8.94□□□□□ -0.98
Rai1-201ENSMUST00000064190 Tnp2P11378 117 aa8.94□□□□□ -0.98
Rai1-201ENSMUST00000064190 Gm5965D3Z724 196 aa8.92□□□□□ -0.98
Rai1-201ENSMUST00000064190 FrylF8VQ05 3007 aa8.92□□□□□ -0.98
Rai1-201ENSMUST00000064190 Chd6A3KFM7 2711 aa8.92□□□□□ -0.98
Rai1-201ENSMUST00000064190 Myo15bI7HPW8 3033 aa8.9□□□□□ -0.98
Rai1-201ENSMUST00000064190 SpegQ62407 3262 aa8.9□□□□□ -0.99
Rai1-201ENSMUST00000064190 Tnrc18Q80WC3 2878 aa8.88□□□□□ -0.99
Rai1-201ENSMUST00000064190 Gm2696A0A1W2P709 240 aa8.87□□□□□ -0.99
Rai1-201ENSMUST00000064190 Col6a5A6H584 2640 aa8.85□□□□□ -0.99
Retrieved 100 of 22,080 RNA–protein pairs in 48.8 ms