RNA–Protein interactions for RNA: ENSMUST00000064190.12

Rai1-201, Transcript of Retinoic acid-induced protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rai1, Length 7,348 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rai1-201ENSMUST00000064190 Rhox8Q6VSS7 320 aa27,91■■■□□ 2,06
Rai1-201ENSMUST00000064190 Ehmt2Q9Z148 1263 aaKnown RBP26,05■■□□□ 1,76
Rai1-201ENSMUST00000064190 Cngb1E1AZ71 1325 aa25,72■■□□□ 1,71
Rai1-201ENSMUST00000064190 Pelp1Q9DBD5 1123 aaKnown RBP25,57■■□□□ 1,68
Rai1-201ENSMUST00000064190 Wdr66E9Q743 1299 aa25,54■■□□□ 1,68
Rai1-201ENSMUST00000064190 Amer1Q7TS75 1132 aa25,45■■□□□ 1,66
Rai1-201ENSMUST00000064190 Ube2uB1AUC4 352 aa25,43■■□□□ 1,66
Rai1-201ENSMUST00000064190 Las1lA2BE28 776 aaKnown RBP25,39■■□□□ 1,65
Rai1-201ENSMUST00000064190 Rpgrip1Q9EPQ2 1331 aa25,31■■□□□ 1,64
Rai1-201ENSMUST00000064190 Zeb1Q64318 1117 aa25,07■■□□□ 1,6
Rai1-201ENSMUST00000064190 Esf1Q3V1V3 845 aaKnown RBP24,67■■□□□ 1,54
Rai1-201ENSMUST00000064190 Gab3Q8BSM5 595 aa24,5■■□□□ 1,51
Rai1-201ENSMUST00000064190 Ccdc136Q3TVA9 1136 aa24,48■■□□□ 1,51
Rai1-201ENSMUST00000064190 Slc24a1Q91WD8 1130 aa24,45■■□□□ 1,5
Rai1-201ENSMUST00000064190 Ttbk1Q6PCN3 1308 aa24,44■■□□□ 1,5
Rai1-201ENSMUST00000064190 4930567H17RikQ3V0K5 233 aa24,37■■□□□ 1,49
Rai1-201ENSMUST00000064190 Npm2Q80W85 207 aa24,36■■□□□ 1,49
Rai1-201ENSMUST00000064190 Myt1lP97500 1187 aa24,29■■□□□ 1,48
Rai1-201ENSMUST00000064190 CenpbP27790 599 aa24,17■■□□□ 1,46
Rai1-201ENSMUST00000064190 4933416C03RikQ3V063 378 aa23,95■■□□□ 1,42
Rai1-201ENSMUST00000064190 UbtfP25976 765 aaKnown RBP23,74■■□□□ 1,39
Rai1-201ENSMUST00000064190 Stra8P70278 393 aa23,64■■□□□ 1,38
Rai1-201ENSMUST00000064190 Eif5bQ05D44 1216 aaKnown RBP23,52■■□□□ 1,36
Rai1-201ENSMUST00000064190 Trim41Q5NCC3 630 aa23,51■■□□□ 1,35
Rai1-201ENSMUST00000064190 Neurod1Q60867 357 aa23,43■■□□□ 1,34
Rai1-201ENSMUST00000064190 Os9Q8K2C7 672 aa23,32■■□□□ 1,32
Rai1-201ENSMUST00000064190 NeflP08551 543 aa23,3■■□□□ 1,32
Rai1-201ENSMUST00000064190 Ppargc1bQ8VHJ7 1014 aa23,27■■□□□ 1,32
Rai1-201ENSMUST00000064190 NrdcQ8BHG1 1161 aa23,25■■□□□ 1,31
Rai1-201ENSMUST00000064190 Cdk11bP24788 784 aaKnown RBP23,14■■□□□ 1,3
Rai1-201ENSMUST00000064190 NefmP08553 848 aa23,12■■□□□ 1,29
Rai1-201ENSMUST00000064190 Anp32bQ9EST5 272 aaKnown RBP23,08■■□□□ 1,29
Rai1-201ENSMUST00000064190 Ap3b1Q9Z1T1 1105 aa23,05■■□□□ 1,28
Rai1-201ENSMUST00000064190 Il27Q8K3I6 234 aa23,04■■□□□ 1,28
Rai1-201ENSMUST00000064190 Myt1Q8CFC2 1127 aa23,03■■□□□ 1,28
Rai1-201ENSMUST00000064190 Acin1Q9JIX8 1338 aaKnown RBP23,03■■□□□ 1,28
Rai1-201ENSMUST00000064190 HrcG5E8J6 738 aa23,01■■□□□ 1,27
Rai1-201ENSMUST00000064190 Fam50aQ9WV03 339 aaKnown RBP23■■□□□ 1,27
Rai1-201ENSMUST00000064190 NclP09405 707 aaKnown RBP22,99■■□□□ 1,27
Rai1-201ENSMUST00000064190 Chic1Q8CBW7 227 aa22,95■■□□□ 1,26
Rai1-201ENSMUST00000064190 Nop58Q6DFW4 536 aaKnown RBP22,8■■□□□ 1,24
Rai1-201ENSMUST00000064190 Zbtb7cQ8VCZ7 619 aa22,79■■□□□ 1,24
Rai1-201ENSMUST00000064190 Tnnt3Q9QZ47 272 aa22,74■■□□□ 1,23
Rai1-201ENSMUST00000064190 DaxxO35613 739 aa22,7■■□□□ 1,22
Rai1-201ENSMUST00000064190 ArxO35085 564 aa22,69■■□□□ 1,22
Rai1-201ENSMUST00000064190 CatipB9EKE5 520 aa22,6■■□□□ 1,21
Rai1-201ENSMUST00000064190 Zbtb4Q5F293 982 aa22,58■■□□□ 1,2
Rai1-201ENSMUST00000064190 Pcgf6Q99NA9 353 aa22,58■■□□□ 1,2
Rai1-201ENSMUST00000064190 Prdm10Q3UTQ7 1184 aa22,54■■□□□ 1,2
Rai1-201ENSMUST00000064190 Ythdc1E9Q5K9 736 aaKnown RBP22,52■■□□□ 1,2
Rai1-201ENSMUST00000064190 Polr3glQ8R0C0 218 aa22,52■■□□□ 1,2
Rai1-201ENSMUST00000064190 Gm13697A2AK42 830 aa22,47■■□□□ 1,19
Rai1-201ENSMUST00000064190 Lmod3E9QA62 571 aa22,39■■□□□ 1,17
Rai1-201ENSMUST00000064190 Atp1b4Q99ME6 356 aa22,39■■□□□ 1,17
Rai1-201ENSMUST00000064190 Hnrnpul2Q00PI9 745 aaKnown RBP22,38■■□□□ 1,17
Rai1-201ENSMUST00000064190 Ifnlr1Q8CGK5 535 aa22,36■■□□□ 1,17
Rai1-201ENSMUST00000064190 Rangap1P46061 589 aaKnown RBP22,34■■□□□ 1,17
Rai1-201ENSMUST00000064190 Rtl5Q5DTT4 599 aa22,31■■□□□ 1,16
Rai1-201ENSMUST00000064190 NischQ80TM9 1593 aa22,3■■□□□ 1,16
Rai1-201ENSMUST00000064190 DiexfQ8BTT6 772 aaKnown RBP22,3■■□□□ 1,16
Rai1-201ENSMUST00000064190 Supt5hO55201 1082 aaKnown RBP22,28■■□□□ 1,16
Rai1-201ENSMUST00000064190 TonslQ6NZL6 1363 aa22,28■■□□□ 1,16
Rai1-201ENSMUST00000064190 Nlrp6Q91WS2 869 aa22,26■■□□□ 1,15
Rai1-201ENSMUST00000064190 Plppr3Q7TPB0 716 aa22,24■■□□□ 1,15
Rai1-201ENSMUST00000064190 Ccdc180J3QNE4 1664 aa22,23■■□□□ 1,15
Rai1-201ENSMUST00000064190 Erich6D3Z6S9 713 aa22,22■■□□□ 1,15
Rai1-201ENSMUST00000064190 Csrnp3P59055 597 aa22,19■■□□□ 1,14
Rai1-201ENSMUST00000064190 Mapk8ip2Q9ERE9 830 aa22,17■■□□□ 1,14
Rai1-201ENSMUST00000064190 Gm38655A0A286YDK6 273 aa22,17■■□□□ 1,14
Rai1-201ENSMUST00000064190 Gm13695A2AK44 830 aa22,07■■□□□ 1,12
Rai1-201ENSMUST00000064190 Vsig10D3YX43 558 aa22,05■■□□□ 1,12
Rai1-201ENSMUST00000064190 Upf2A2AT37 1269 aaKnown RBP22,04■■□□□ 1,12
Rai1-201ENSMUST00000064190 Lmod2Q3UHZ5 550 aa22,02■■□□□ 1,12
Rai1-201ENSMUST00000064190 Anp32aO35381 247 aa22■■□□□ 1,11
Rai1-201ENSMUST00000064190 Hsp90aa1P07901 733 aaKnown RBP21,97■■□□□ 1,11
Rai1-201ENSMUST00000064190 Rtl1Q7M732 1744 aa21,9■■□□□ 1,1
Rai1-201ENSMUST00000064190 Mier1Q5UAK0 511 aa21,85■■□□□ 1,09
Rai1-201ENSMUST00000064190 DekQ7TNV0 380 aaKnown RBP21,84■■□□□ 1,09
Rai1-201ENSMUST00000064190 Zcchc6Q5BLK4 1491 aaKnown RBP21,79■■□□□ 1,08
Rai1-201ENSMUST00000064190 Plekhg3Q4VAC9 1341 aa21,74■■□□□ 1,07
Rai1-201ENSMUST00000064190 Gm35339A0A140LHH9 1649 aa21,71■■□□□ 1,07
Rai1-201ENSMUST00000064190 Rad21Q61550 635 aaKnown RBP21,67■■□□□ 1,06
Rai1-201ENSMUST00000064190 Fkbp15Q6P9Q6 1216 aaKnown RBP21,66■■□□□ 1,06
Rai1-201ENSMUST00000064190 Ppp4r2Q0VGB7 417 aa21,63■■□□□ 1,05
Rai1-201ENSMUST00000064190 Irx6Q9ER75 438 aa21,6■■□□□ 1,05
Rai1-201ENSMUST00000064190 Trim26Q99PN3 545 aa21,56■■□□□ 1,04
Rai1-201ENSMUST00000064190 Arid4bA2CG63 1314 aaKnown RBP21,55■■□□□ 1,04
Rai1-201ENSMUST00000064190 Znf326O88291 580 aa21,54■■□□□ 1,04
Rai1-201ENSMUST00000064190 Eid3Q3V124 375 aa21,53■■□□□ 1,04
Rai1-201ENSMUST00000064190 ClspnQ80YR7 1315 aa21,53■■□□□ 1,04
Rai1-201ENSMUST00000064190 Fgd1P52734 960 aa21,49■■□□□ 1,03
Rai1-201ENSMUST00000064190 Npm1Q61937 292 aaKnown RBP21,49■■□□□ 1,03
Rai1-201ENSMUST00000064190 Trim44Q9QXA7 346 aa21,48■■□□□ 1,03
Rai1-201ENSMUST00000064190 Abcc9P70170 1546 aa21,47■■□□□ 1,03
Rai1-201ENSMUST00000064190 Clstn1Q9EPL2 979 aa21,44■■□□□ 1,02
Rai1-201ENSMUST00000064190 Calr4Q3TQS0 420 aa21,37■■□□□ 1,01
Rai1-201ENSMUST00000064190 PtmaP26350 111 aa21,34■■□□□ 1,01
Rai1-201ENSMUST00000064190 Rtn4Q99P72 1162 aaKnown RBP21,33■■□□□ 1,01
Rai1-201ENSMUST00000064190 P3h3Q8CG70 732 aa21,31■■□□□ 1
Rai1-201ENSMUST00000064190 Znf316Q6PGE4 1016 aa21,29■■□□□ 1
Retrieved 100 of 22,080 RNA–protein pairs in 39,5 ms