RNA–Protein interactions for RNA: ENSMUST00000047835.7

Scaf11-201, Transcript of SR-related CTD-associated factor 11, mousemouse

TSL 5 BASIC

Gene Scaf11, Length 5,766 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf11-201ENSMUST00000047835 Gm26620Q9CY65 116 aa11.56□□□□□ -0.56
Scaf11-201ENSMUST00000047835 Ash1lQ99MY8 2958 aa11.55□□□□□ -0.56
Scaf11-201ENSMUST00000047835 Map1aQ9QYR6 2776 aa11.54□□□□□ -0.56
Scaf11-201ENSMUST00000047835 Gm10065F6TJM2 114 aa11.54□□□□□ -0.56
Scaf11-201ENSMUST00000047835 Mast4Q811L6 2618 aa11.54□□□□□ -0.56
Scaf11-201ENSMUST00000047835 Cypt14J3QPF7 87 aa11.53□□□□□ -0.56
Scaf11-201ENSMUST00000047835 Akap13E9Q394 2776 aa11.53□□□□□ -0.56
Scaf11-201ENSMUST00000047835 Cdc42se1Q8BHL7 80 aa11.52□□□□□ -0.56
Scaf11-201ENSMUST00000047835 Fam229bQ8CF36 80 aa11.52□□□□□ -0.56
Scaf11-201ENSMUST00000047835 Ranbp2Q9ERU9 3053 aaKnown RBP11.52□□□□□ -0.56
Scaf11-201ENSMUST00000047835 Szt2A2A9C3 3431 aa11.52□□□□□ -0.57
Scaf11-201ENSMUST00000047835 Rnase13Q5GAM7 153 aa11.51□□□□□ -0.57
Scaf11-201ENSMUST00000047835 Gm10320E9PW43 113 aa11.5□□□□□ -0.57
Scaf11-201ENSMUST00000047835 AtmQ62388 3066 aa11.48□□□□□ -0.57
Scaf11-201ENSMUST00000047835 Itpr3P70227 2670 aa11.47□□□□□ -0.57
Scaf11-201ENSMUST00000047835 Chtf8P0CG14 533 aa11.46□□□□□ -0.57
Scaf11-201ENSMUST00000047835 Cfap54Q8C6S9 3106 aa11.45□□□□□ -0.58
Scaf11-201ENSMUST00000047835 Vps13aQ5H8C4 3166 aa11.43□□□□□ -0.58
Scaf11-201ENSMUST00000047835 Phxr4P15974 95 aa11.42□□□□□ -0.58
Scaf11-201ENSMUST00000047835 NipblQ6KCD5 2798 aaKnown RBP11.41□□□□□ -0.58
Scaf11-201ENSMUST00000047835 Ubr5Q80TP3 2792 aa11.39□□□□□ -0.59
Scaf11-201ENSMUST00000047835 Gm9821Q8K076 103 aa11.38□□□□□ -0.59
Scaf11-201ENSMUST00000047835 2310034C09RikQ9D746 214 aa11.37□□□□□ -0.59
Scaf11-201ENSMUST00000047835 HrnrQ8VHD8 2496 aa11.36□□□□□ -0.59
Scaf11-201ENSMUST00000047835 Igsf10Q3V1M1 2594 aa11.36□□□□□ -0.59
Scaf11-201ENSMUST00000047835 Sprr1aQ62266 144 aa11.35□□□□□ -0.59
Scaf11-201ENSMUST00000047835 6030445D17RikE9Q8F9 148 aa11.34□□□□□ -0.59
Scaf11-201ENSMUST00000047835 Uqcr11Q9CPX8 56 aa11.33□□□□□ -0.6
Scaf11-201ENSMUST00000047835 Odf3bQ5M8M2 238 aa11.31□□□□□ -0.6
Scaf11-201ENSMUST00000047835 Gm10139O88245 57 aa11.3□□□□□ -0.6
Scaf11-201ENSMUST00000047835 Gm9507D3Z5T3 223 aa11.29□□□□□ -0.6
Scaf11-201ENSMUST00000047835 Lrrc37aB1AWG4 3215 aa11.28□□□□□ -0.6
Scaf11-201ENSMUST00000047835 Unc80Q8BLN6 3261 aa11.28□□□□□ -0.6
Scaf11-201ENSMUST00000047835 AspmQ8CJ27 3122 aa11.27□□□□□ -0.61
Scaf11-201ENSMUST00000047835 Muc2Q80Z19 2680 aa11.23□□□□□ -0.61
Scaf11-201ENSMUST00000047835 Mp68P56379 58 aa11.23□□□□□ -0.61
Scaf11-201ENSMUST00000047835 Gm4491E0CX42 125 aa11.22□□□□□ -0.61
Scaf11-201ENSMUST00000047835 Gm21798J3QNU5 87 aa11.22□□□□□ -0.61
Scaf11-201ENSMUST00000047835 Nbeal2Q6ZQA0 2742 aa11.21□□□□□ -0.62
Scaf11-201ENSMUST00000047835 Krtap15-1Q9QZU5 150 aa11.2□□□□□ -0.62
Scaf11-201ENSMUST00000047835 Chd6A3KFM7 2711 aa11.2□□□□□ -0.62
Scaf11-201ENSMUST00000047835 Celsr1O35161 3034 aa11.18□□□□□ -0.62
Scaf11-201ENSMUST00000047835 BptfA2A654 3036 aaKnown RBP11.16□□□□□ -0.62
Scaf11-201ENSMUST00000047835 Krtap13O88375 197 aa11.12□□□□□ -0.63
Scaf11-201ENSMUST00000047835 Krtap10-4Q08EG8 221 aa11.1□□□□□ -0.63
Scaf11-201ENSMUST00000047835 Krtap29-1A2A5X4 342 aa11.08□□□□□ -0.64
Scaf11-201ENSMUST00000047835 9530053A07RikE9PVG8 2581 aa11.08□□□□□ -0.64
Scaf11-201ENSMUST00000047835 Tep1P97499 2629 aa11.08□□□□□ -0.64
Scaf11-201ENSMUST00000047835 Celsr3Q91ZI0 3301 aa11.07□□□□□ -0.64
Scaf11-201ENSMUST00000047835 Cystm1Q8K353 104 aa11.05□□□□□ -0.64
Scaf11-201ENSMUST00000047835 Spink7Q6IE32 76 aa11.05□□□□□ -0.64
Scaf11-201ENSMUST00000047835 Gm10643Q3URG9 111 aa11.03□□□□□ -0.64
Scaf11-201ENSMUST00000047835 2310050C09RikG5E8Z3 280 aa11.02□□□□□ -0.64
Scaf11-201ENSMUST00000047835 Pla2g10Q9QXX3 151 aa11.02□□□□□ -0.64
Scaf11-201ENSMUST00000047835 FryE9Q8I9 3020 aa11.02□□□□□ -0.65
Scaf11-201ENSMUST00000047835 A730071L15RikQ8C4X0 137 aa11.01□□□□□ -0.65
Scaf11-201ENSMUST00000047835 Gm16253D3Z167 63 aa11.01□□□□□ -0.65
Scaf11-201ENSMUST00000047835 Pkd1l1Q8R526 2615 aa11□□□□□ -0.65
Scaf11-201ENSMUST00000047835 Kmt2bO08550 2713 aa10.99□□□□□ -0.65
Scaf11-201ENSMUST00000047835 Gm3880A0A1B0GSB3 72 aa10.98□□□□□ -0.65
Scaf11-201ENSMUST00000047835 Wdfy4E9Q2M9 3149 aa10.98□□□□□ -0.65
Scaf11-201ENSMUST00000047835 Col6a5A6H584 2640 aa10.97□□□□□ -0.65
Scaf11-201ENSMUST00000047835 Hivep1Q03172 2688 aa10.96□□□□□ -0.65
Scaf11-201ENSMUST00000047835 FrylF8VQ05 3007 aa10.96□□□□□ -0.65
Scaf11-201ENSMUST00000047835 Brca2P97929 3329 aa10.96□□□□□ -0.65
Scaf11-201ENSMUST00000047835 Stab2Q8R4U0 2559 aa10.95□□□□□ -0.66
Scaf11-201ENSMUST00000047835 Frem2Q6NVD0 3160 aa10.95□□□□□ -0.66
Scaf11-201ENSMUST00000047835 Krtap10-10A0A1W2P7T6 217 aa10.94□□□□□ -0.66
Scaf11-201ENSMUST00000047835 Gm9955Q8CEJ8 102 aa10.94□□□□□ -0.66
Scaf11-201ENSMUST00000047835 Lama1P19137 3084 aa10.92□□□□□ -0.66
Scaf11-201ENSMUST00000047835 Gm37013Q8K491 104 aa10.92□□□□□ -0.66
Scaf11-201ENSMUST00000047835 Utp20Q5XG71 2788 aaKnown RBP10.91□□□□□ -0.66
Scaf11-201ENSMUST00000047835 NbeaQ9EPN1 2936 aa10.9□□□□□ -0.66
Scaf11-201ENSMUST00000047835 2310061N02RikQ9D6S9 174 aa10.89□□□□□ -0.67
Scaf11-201ENSMUST00000047835 Dmxl2Q8BPN8 3032 aa10.89□□□□□ -0.67
Scaf11-201ENSMUST00000047835 Adgrg4B7ZCC9 3073 aa10.89□□□□□ -0.67
Scaf11-201ENSMUST00000047835 Col6a3E9PWQ3 3284 aa10.87□□□□□ -0.67
Scaf11-201ENSMUST00000047835 Itpr2Q9Z329 2701 aa10.86□□□□□ -0.67
Scaf11-201ENSMUST00000047835 Fam229aB2KGE5 128 aa10.83□□□□□ -0.68
Scaf11-201ENSMUST00000047835 CriptO70333 101 aa10.81□□□□□ -0.68
Scaf11-201ENSMUST00000047835 Dchs2A0A0A6YW72 3346 aa10.81□□□□□ -0.68
Scaf11-201ENSMUST00000047835 Krtap14O08640 167 aa10.8□□□□□ -0.68
Scaf11-201ENSMUST00000047835 Gm5767A0A0J9YTU8 78 aa10.79□□□□□ -0.68
Scaf11-201ENSMUST00000047835 Sec61bQ9CQS8 96 aaKnown RBP10.76□□□□□ -0.69
Scaf11-201ENSMUST00000047835 Igfn1Q3KNY0 2849 aa10.76□□□□□ -0.69
Scaf11-201ENSMUST00000047835 Gm20538F6Z9R1 75 aa10.73□□□□□ -0.69
Scaf11-201ENSMUST00000047835 VcanQ62059 3357 aa10.72□□□□□ -0.69
Scaf11-201ENSMUST00000047835 Gm2696A0A1W2P709 240 aa10.68□□□□□ -0.7
Scaf11-201ENSMUST00000047835 Tex15F8VPN2 2785 aa10.65□□□□□ -0.7
Scaf11-201ENSMUST00000047835 Zzef1Q5SSH7 2924 aa10.63□□□□□ -0.71
Scaf11-201ENSMUST00000047835 Tenm4Q3UHK6 2771 aa10.62□□□□□ -0.71
Scaf11-201ENSMUST00000047835 Zfhx3Q61329 3726 aa10.62□□□□□ -0.71
Scaf11-201ENSMUST00000047835 Wdfy3Q6VNB8 3508 aa10.56□□□□□ -0.72
Scaf11-201ENSMUST00000047835 Dchs1E9PVD3 3291 aa10.54□□□□□ -0.72
Scaf11-201ENSMUST00000047835 Camk2n1Q6QWF9 78 aa10.54□□□□□ -0.72
Scaf11-201ENSMUST00000047835 DspE9Q557 2883 aaKnown RBP10.53□□□□□ -0.72
Scaf11-201ENSMUST00000047835 FcgbpE9Q0B5 2583 aa10.53□□□□□ -0.72
Scaf11-201ENSMUST00000047835 Tnp2P11378 117 aa10.52□□□□□ -0.72
Scaf11-201ENSMUST00000047835 FlncQ8VHX6 2726 aaKnown RBP10.52□□□□□ -0.73
Scaf11-201ENSMUST00000047835 Myo15aQ9QZZ4 3511 aa10.49□□□□□ -0.73
Retrieved 100 of 22,080 RNA–protein pairs in 50.8 ms