RNA–Protein interactions for RNA: ENSMUST00000033012.8

Copb1-201, Transcript of Coatomer subunit beta, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Copb1, Length 3,346 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Copb1-201ENSMUST00000033012 Fam168bQ80XQ8 194 aa6.27□□□□□ -1.41
Copb1-201ENSMUST00000033012 CubnQ9JLB4 3623 aa6.27□□□□□ -1.41
Copb1-201ENSMUST00000033012 Kmt2bO08550 2713 aa6.26□□□□□ -1.41
Copb1-201ENSMUST00000033012 Nf1Q04690 2841 aa6.26□□□□□ -1.41
Copb1-201ENSMUST00000033012 Cmc4Q61908 68 aa6.26□□□□□ -1.41
Copb1-201ENSMUST00000033012 Brwd1Q921C3 2304 aa6.26□□□□□ -1.41
Copb1-201ENSMUST00000033012 Pkd1l2Q7TN88 2461 aa6.25□□□□□ -1.41
Copb1-201ENSMUST00000033012 Ncor2Q9WU42 2472 aaKnown RBP6.25□□□□□ -1.41
Copb1-201ENSMUST00000033012 Q8BGJ3 129 aa6.25□□□□□ -1.41
Copb1-201ENSMUST00000033012 Sprr1aQ62266 144 aa6.24□□□□□ -1.41
Copb1-201ENSMUST00000033012 Defb38Q7TNV7 63 aa6.24□□□□□ -1.41
Copb1-201ENSMUST00000033012 FlncQ8VHX6 2726 aaKnown RBP6.24□□□□□ -1.41
Copb1-201ENSMUST00000033012 Reg3bP35230 175 aa6.23□□□□□ -1.41
Copb1-201ENSMUST00000033012 Defb18Q30KP5 85 aa6.22□□□□□ -1.41
Copb1-201ENSMUST00000033012 1700012A03RikQ9DAF1 130 aa6.21□□□□□ -1.42
Copb1-201ENSMUST00000033012 Gm10139O88245 57 aa6.2□□□□□ -1.42
Copb1-201ENSMUST00000033012 NipblQ6KCD5 2798 aaKnown RBP6.19□□□□□ -1.42
Copb1-201ENSMUST00000033012 Sptbn4E9PX29 2561 aa6.19□□□□□ -1.42
Copb1-201ENSMUST00000033012 BsnO88737 3942 aa6.17□□□□□ -1.42
Copb1-201ENSMUST00000033012 Tenm2Q9WTS5 2764 aa6.16□□□□□ -1.42
Copb1-201ENSMUST00000033012 Nbeal1E9PYP2 2688 aa6.16□□□□□ -1.42
Copb1-201ENSMUST00000033012 Pdzd2E9Q1M1 2796 aa6.16□□□□□ -1.42
Copb1-201ENSMUST00000033012 Pla2g10Q9QXX3 151 aa6.15□□□□□ -1.42
Copb1-201ENSMUST00000033012 Ptpn13Q64512 2453 aa6.14□□□□□ -1.43
Copb1-201ENSMUST00000033012 Gm21798J3QNU5 87 aa6.14□□□□□ -1.43
Copb1-201ENSMUST00000033012 Hspg2Q05793 3707 aaKnown RBP6.13□□□□□ -1.43
Copb1-201ENSMUST00000033012 Chd8Q09XV5 2582 aaKnown RBP6.13□□□□□ -1.43
Copb1-201ENSMUST00000033012 Igkv3-5A0A140T8M6 119 aa6.12□□□□□ -1.43
Copb1-201ENSMUST00000033012 ApcQ61315 2845 aa6.12□□□□□ -1.43
Copb1-201ENSMUST00000033012 Gm20538F6Z9R1 75 aa6.1□□□□□ -1.43
Copb1-201ENSMUST00000033012 MtorQ9JLN9 2549 aa6.1□□□□□ -1.43
Copb1-201ENSMUST00000033012 Csmd3Q80T79 3707 aa6.1□□□□□ -1.43
Copb1-201ENSMUST00000033012 Krtap24-1G3X9A2 248 aa6.09□□□□□ -1.44
Copb1-201ENSMUST00000033012 Tenm3Q9WTS6 2715 aa6.08□□□□□ -1.44
Copb1-201ENSMUST00000033012 Zfp462B1AWL2 2495 aaKnown RBP6.07□□□□□ -1.44
Copb1-201ENSMUST00000033012 AplnQ9R0R4 77 aa6.07□□□□□ -1.44
Copb1-201ENSMUST00000033012 AcacbE9Q4Z2 2448 aa6.06□□□□□ -1.44
Copb1-201ENSMUST00000033012 Abca12E9Q876 2595 aa6.05□□□□□ -1.44
Copb1-201ENSMUST00000033012 Epg5Q80TA9 2572 aa6.05□□□□□ -1.44
Copb1-201ENSMUST00000033012 Ank2Q8C8R3 3898 aa6.05□□□□□ -1.44
Copb1-201ENSMUST00000033012 Bahcc1Q3UHR0 2643 aa6.05□□□□□ -1.44
Copb1-201ENSMUST00000033012 6030445D17RikE9Q8F9 148 aa6.05□□□□□ -1.44
Copb1-201ENSMUST00000033012 HrnrQ8VHD8 2496 aa6.04□□□□□ -1.44
Copb1-201ENSMUST00000033012 Tex15F8VPN2 2785 aa6.04□□□□□ -1.44
Copb1-201ENSMUST00000033012 Gm4707V9GXN5 68 aa6.02□□□□□ -1.45
Copb1-201ENSMUST00000033012 Mp68P56379 58 aa6.01□□□□□ -1.45
Copb1-201ENSMUST00000033012 FlnaQ8BTM8 2647 aaKnown RBP6.01□□□□□ -1.45
Copb1-201ENSMUST00000033012 Wfdc10Q3V2J9 124 aa6□□□□□ -1.45
Copb1-201ENSMUST00000033012 Tep1P97499 2629 aa6□□□□□ -1.45
Copb1-201ENSMUST00000033012 Itpr1P11881 2749 aa5.99□□□□□ -1.45
Copb1-201ENSMUST00000033012 Usp9yF8VPU6 2556 aa5.99□□□□□ -1.45
Copb1-201ENSMUST00000033012 Ankrd11E9Q4F7 2643 aa5.98□□□□□ -1.45
Copb1-201ENSMUST00000033012 PolqQ8CGS6 2544 aa5.97□□□□□ -1.45
Copb1-201ENSMUST00000033012 AW011738F6S7Q2 159 aa5.97□□□□□ -1.45
Copb1-201ENSMUST00000033012 Defb9Q8R2I6 67 aa5.96□□□□□ -1.46
Copb1-201ENSMUST00000033012 PtprqP0C5E4 2300 aa5.96□□□□□ -1.46
Copb1-201ENSMUST00000033012 Znf706Q9D115 76 aaKnown RBP5.95□□□□□ -1.46
Copb1-201ENSMUST00000033012 SycnQ8VCK7 134 aa5.94□□□□□ -1.46
Copb1-201ENSMUST00000033012 Megf8P60882 2789 aa5.94□□□□□ -1.46
Copb1-201ENSMUST00000033012 Romo1P60603 79 aa5.93□□□□□ -1.46
Copb1-201ENSMUST00000033012 Usp24B1AY13 2617 aaKnown RBP5.93□□□□□ -1.46
Copb1-201ENSMUST00000033012 Dnah3Q8BW94 4083 aa5.92□□□□□ -1.46
Copb1-201ENSMUST00000033012 Gm27235Q3UW50 83 aa5.92□□□□□ -1.46
Copb1-201ENSMUST00000033012 Nbeal2Q6ZQA0 2742 aa5.92□□□□□ -1.46
Copb1-201ENSMUST00000033012 Kmt2aP55200 3966 aa5.92□□□□□ -1.46
Copb1-201ENSMUST00000033012 Dnah1E9Q8T7 4250 aa5.91□□□□□ -1.46
Copb1-201ENSMUST00000033012 Erdr1J3QMM0 206 aa5.91□□□□□ -1.46
Copb1-201ENSMUST00000033012 Notch2O35516 2470 aa5.9□□□□□ -1.46
Copb1-201ENSMUST00000033012 Dnah11E9Q7N9 4488 aa5.9□□□□□ -1.46
Copb1-201ENSMUST00000033012 Gm16253D3Z167 63 aa5.9□□□□□ -1.46
Copb1-201ENSMUST00000033012 Q8K1L6 76 aa5.89□□□□□ -1.47
Copb1-201ENSMUST00000033012 Srrm2Q8BTI8 2703 aaKnown RBP5.88□□□□□ -1.47
Copb1-201ENSMUST00000033012 Muc2Q80Z19 2680 aa5.88□□□□□ -1.47
Copb1-201ENSMUST00000033012 TrrapQ80YV3 2565 aaKnown RBP5.87□□□□□ -1.47
Copb1-201ENSMUST00000033012 Fbn1Q61554 2873 aaKnown RBP5.87□□□□□ -1.47
Copb1-201ENSMUST00000033012 Defb13Q8R2I4 64 aa5.86□□□□□ -1.47
Copb1-201ENSMUST00000033012 Gm10999F6Q4M4 69 aa5.86□□□□□ -1.47
Copb1-201ENSMUST00000033012 2310079G19RikQ9D6L6 185 aa5.84□□□□□ -1.47
Copb1-201ENSMUST00000033012 Defb2P82020 71 aa5.83□□□□□ -1.48
Copb1-201ENSMUST00000033012 Dnah7bL7N1Y0 4068 aa5.83□□□□□ -1.48
Copb1-201ENSMUST00000033012 Hectd1Q69ZR2 2618 aaKnown RBP5.83□□□□□ -1.48
Copb1-201ENSMUST00000033012 Defb1P56386 69 aa5.81□□□□□ -1.48
Copb1-201ENSMUST00000033012 Krtap14O08640 167 aa5.81□□□□□ -1.48
Copb1-201ENSMUST00000033012 Gm10642Q3TWM1 71 aa5.8□□□□□ -1.48
Copb1-201ENSMUST00000033012 Unc79Q0KK59 2596 aa5.79□□□□□ -1.48
Copb1-201ENSMUST00000033012 Gm3250E9Q1M3 230 aa5.79□□□□□ -1.48
Copb1-201ENSMUST00000033012 Myo18bE9PV66 2605 aa5.78□□□□□ -1.48
Copb1-201ENSMUST00000033012 Gm3233E9Q2H5 230 aa5.78□□□□□ -1.48
Copb1-201ENSMUST00000033012 FasnP19096 2504 aaKnown RBP5.77□□□□□ -1.49
Copb1-201ENSMUST00000033012 Tenm1Q9WTS4 2731 aa5.76□□□□□ -1.49
Copb1-201ENSMUST00000033012 Gm20537G3UYK7 97 aa5.75□□□□□ -1.49
Copb1-201ENSMUST00000033012 Notch1Q01705 2531 aa5.74□□□□□ -1.49
Copb1-201ENSMUST00000033012 VwfQ8CIZ8 2813 aa5.74□□□□□ -1.49
Copb1-201ENSMUST00000033012 Dnah17Q69Z23 4481 aa5.74□□□□□ -1.49
Copb1-201ENSMUST00000033012 Gm3880A0A1B0GSB3 72 aa5.74□□□□□ -1.49
Copb1-201ENSMUST00000033012 Prm2P07978 107 aa5.72□□□□□ -1.49
Copb1-201ENSMUST00000033012 Anapc11Q9CPX9 84 aa5.72□□□□□ -1.49
Copb1-201ENSMUST00000033012 Col7a1Q63870 2944 aa5.72□□□□□ -1.49
Copb1-201ENSMUST00000033012 Col6a5A6H584 2640 aa5.71□□□□□ -1.5
Copb1-201ENSMUST00000033012 2310061N02RikQ9D6S9 174 aa5.69□□□□□ -1.5
Retrieved 100 of 22,080 RNA–protein pairs in 33.3 ms