RNA–Protein interactions for RNA: ENSMUST00000030205.13

Ttc39b-201, Transcript of Tetratricopeptide repeat protein 39B, mousemouse

TSL 1 (best) BASIC

Gene Ttc39b, Length 842 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc39b-201ENSMUST00000030205 Cops9Q3U898 57 aa11.02□□□□□ -0.65
Ttc39b-201ENSMUST00000030205 Gm21886J3QJU9 214 aa11.01□□□□□ -0.65
Ttc39b-201ENSMUST00000030205 Stard4Q99JV5 224 aa11.01□□□□□ -0.65
Ttc39b-201ENSMUST00000030205 Lage3Q9CR70 148 aa11.01□□□□□ -0.65
Ttc39b-201ENSMUST00000030205 Hbb-bsA8DUK4 147 aa11□□□□□ -0.65
Ttc39b-201ENSMUST00000030205 Hbb-b1P02088 147 aa11□□□□□ -0.65
Ttc39b-201ENSMUST00000030205 A0A286YE02 88 aa10.99□□□□□ -0.65
Ttc39b-201ENSMUST00000030205 Gm11569B1AQB1 180 aa10.99□□□□□ -0.65
Ttc39b-201ENSMUST00000030205 Xlr5cQ9JJR2 179 aa10.99□□□□□ -0.65
Ttc39b-201ENSMUST00000030205 Trav4n-4A0A075B615 110 aa10.98□□□□□ -0.65
Ttc39b-201ENSMUST00000030205 Igkv3-4A0A140T8Q4 119 aa10.97□□□□□ -0.65
Ttc39b-201ENSMUST00000030205 Gm9376G3UW68 176 aa10.97□□□□□ -0.65
Ttc39b-201ENSMUST00000030205 Trav4d-3A0A075B625 110 aa10.96□□□□□ -0.65
Ttc39b-201ENSMUST00000030205 Gm11939A2A592 99 aa10.96□□□□□ -0.65
Ttc39b-201ENSMUST00000030205 Gm10604Q3V0X7 143 aa10.96□□□□□ -0.65
Ttc39b-201ENSMUST00000030205 Dpm2Q9Z324 84 aa10.94□□□□□ -0.66
Ttc39b-201ENSMUST00000030205 Vamp3P63024 103 aa10.93□□□□□ -0.66
Ttc39b-201ENSMUST00000030205 Gm5142Q8C5X9 133 aa10.93□□□□□ -0.66
Ttc39b-201ENSMUST00000030205 Gm10295Q8CCF3 114 aa10.93□□□□□ -0.66
Ttc39b-201ENSMUST00000030205 Hist2h2beQ64524 126 aa10.92□□□□□ -0.66
Ttc39b-201ENSMUST00000030205 Gm20458E9PXJ7 78 aa10.91□□□□□ -0.66
Ttc39b-201ENSMUST00000030205 Gm5868Q8BJG1 145 aa10.9□□□□□ -0.66
Ttc39b-201ENSMUST00000030205 Plscr4P58196 326 aa10.88□□□□□ -0.67
Ttc39b-201ENSMUST00000030205 SnrpeP62305 92 aaKnown RBP10.88□□□□□ -0.67
Ttc39b-201ENSMUST00000030205 4930535I16RikQ9CUI2 172 aa10.87□□□□□ -0.67
Ttc39b-201ENSMUST00000030205 2310034C09RikQ9D746 214 aa10.87□□□□□ -0.67
Ttc39b-201ENSMUST00000030205 Igkv8-21A0A140T8P7 120 aa10.85□□□□□ -0.67
Ttc39b-201ENSMUST00000030205 SelenowP63300 88 aa10.85□□□□□ -0.67
Ttc39b-201ENSMUST00000030205 A730071L15RikQ8C4X0 137 aa10.85□□□□□ -0.67
Ttc39b-201ENSMUST00000030205 Vmn1r197Q8R265 298 aa10.85□□□□□ -0.67
Ttc39b-201ENSMUST00000030205 Dnal4Q9DCM4 105 aa10.85□□□□□ -0.67
Ttc39b-201ENSMUST00000030205 Q8BT88 171 aa10.84□□□□□ -0.67
Ttc39b-201ENSMUST00000030205 Krtap19-3Q925H6 87 aa10.84□□□□□ -0.67
Ttc39b-201ENSMUST00000030205 Ighv10-1A0A0B4J1J6 119 aa10.83□□□□□ -0.68
Ttc39b-201ENSMUST00000030205 Gm16253D3Z167 63 aa10.83□□□□□ -0.68
Ttc39b-201ENSMUST00000030205 Trappc1Q5NCF2 145 aa10.83□□□□□ -0.68
Ttc39b-201ENSMUST00000030205 Eif4ebp3Q80VV3 101 aa10.83□□□□□ -0.68
Ttc39b-201ENSMUST00000030205 Gnb1lQ9EQ15 326 aa10.82□□□□□ -0.68
Ttc39b-201ENSMUST00000030205 Gm10401E9Q3K6 71 aa10.81□□□□□ -0.68
Ttc39b-201ENSMUST00000030205 Krtap16-3Q8C1I6 86 aa10.81□□□□□ -0.68
Ttc39b-201ENSMUST00000030205 Hist3h2bbQ8CGP0 126 aa10.81□□□□□ -0.68
Ttc39b-201ENSMUST00000030205 Krtap19-1Q925H2 87 aa10.81□□□□□ -0.68
Ttc39b-201ENSMUST00000030205 Lce1gQ9D195 139 aa10.81□□□□□ -0.68
Ttc39b-201ENSMUST00000030205 Hist3h2baQ9D2U9 126 aa10.81□□□□□ -0.68
Ttc39b-201ENSMUST00000030205 Hist1h2bfP10853 126 aa10.8□□□□□ -0.68
Ttc39b-201ENSMUST00000030205 Hist1h2bbQ64475 126 aa10.8□□□□□ -0.68
Ttc39b-201ENSMUST00000030205 Hist1h2bkQ8CGP1 126 aaKnown RBP10.8□□□□□ -0.68
Ttc39b-201ENSMUST00000030205 Hist1h2bpQ8CGP2 126 aaKnown RBP10.8□□□□□ -0.68
Ttc39b-201ENSMUST00000030205 Gm10318A0A1W2P728 225 aa10.79□□□□□ -0.68
Ttc39b-201ENSMUST00000030205 Igkv8-28A0A0G2JE47 121 aa10.78□□□□□ -0.68
Ttc39b-201ENSMUST00000030205 1700042G07RikB1AUF7 90 aa10.78□□□□□ -0.68
Ttc39b-201ENSMUST00000030205 Gm37389A0A0A6YW05 95 aa10.77□□□□□ -0.69
Ttc39b-201ENSMUST00000030205 Smim1P0C8K7 78 aa10.76□□□□□ -0.69
Ttc39b-201ENSMUST00000030205 Ndufv3Q8BK30 104 aaKnown RBP10.76□□□□□ -0.69
Ttc39b-201ENSMUST00000030205 Smim26Q3V460 107 aa10.75□□□□□ -0.69
Ttc39b-201ENSMUST00000030205 Cend1Q9JKC6 149 aa10.74□□□□□ -0.69
Ttc39b-201ENSMUST00000030205 Defb45Q3V490 66 aa10.73□□□□□ -0.69
Ttc39b-201ENSMUST00000030205 Rpl37Q9D823 97 aa10.73□□□□□ -0.69
Ttc39b-201ENSMUST00000030205 1700018G05RikA0A1B0GSI2 66 aa10.71□□□□□ -0.69
Ttc39b-201ENSMUST00000030205 Krtap1-4Q3V2D6 188 aa10.7□□□□□ -0.7
Ttc39b-201ENSMUST00000030205 Rpl39lQ9CQD0 51 aa10.68□□□□□ -0.7
Ttc39b-201ENSMUST00000030205 P06320 134 aa10.66□□□□□ -0.7
Ttc39b-201ENSMUST00000030205 Chchd10Q7TNL9 138 aa10.65□□□□□ -0.7
Ttc39b-201ENSMUST00000030205 Gm26620Q9CY65 116 aa10.64□□□□□ -0.71
Ttc39b-201ENSMUST00000030205 P0C913 63 aa10.63□□□□□ -0.71
Ttc39b-201ENSMUST00000030205 SspoQ8CG65 4998 aa10.62□□□□□ -0.71
Ttc39b-201ENSMUST00000030205 Vamp8O70404 101 aa10.59□□□□□ -0.71
Ttc39b-201ENSMUST00000030205 IqcjQ8BPW0 110 aa10.59□□□□□ -0.71
Ttc39b-201ENSMUST00000030205 Rab37Q9JKM7 223 aa10.59□□□□□ -0.71
Ttc39b-201ENSMUST00000030205 Trav3-4A0A075B654 114 aa10.58□□□□□ -0.72
Ttc39b-201ENSMUST00000030205 Syne2Q6ZWQ0 6874 aaKnown RBP10.58□□□□□ -0.72
Ttc39b-201ENSMUST00000030205 Igkv1-35A0A0G2JDE5 120 aa10.57□□□□□ -0.72
Ttc39b-201ENSMUST00000030205 Igkv2-109A0A075B5K6 120 aa10.54□□□□□ -0.72
Ttc39b-201ENSMUST00000030205 Uqcc3Q8K2T4 89 aa10.53□□□□□ -0.72
Ttc39b-201ENSMUST00000030205 Gemin7Q9CWY4 129 aa10.53□□□□□ -0.72
Ttc39b-201ENSMUST00000030205 Igkv8-30A0A140T8M3 121 aa10.52□□□□□ -0.73
Ttc39b-201ENSMUST00000030205 Gm16381A0A1Y7VKT9 73 aa10.52□□□□□ -0.73
Ttc39b-201ENSMUST00000030205 H2al1nQ497L1 109 aa10.52□□□□□ -0.73
Ttc39b-201ENSMUST00000030205 Cox6a2P43023 97 aa10.51□□□□□ -0.73
Ttc39b-201ENSMUST00000030205 Gm10308Q9CVR5 141 aa10.51□□□□□ -0.73
Ttc39b-201ENSMUST00000030205 Cypt15B1AXS0 87 aa10.5□□□□□ -0.73
Ttc39b-201ENSMUST00000030205 Grcc10O35127 126 aa10.49□□□□□ -0.73
Ttc39b-201ENSMUST00000030205 Sigmar1O55242 223 aa10.49□□□□□ -0.73
Ttc39b-201ENSMUST00000030205 Pam16Q9CQV1 125 aa10.47□□□□□ -0.73
Ttc39b-201ENSMUST00000030205 Fam229aB2KGE5 128 aa10.46□□□□□ -0.73
Ttc39b-201ENSMUST00000030205 Ifitm6A0A1B0GS75 124 aa10.45□□□□□ -0.74
Ttc39b-201ENSMUST00000030205 Sfta2E9PXB6 77 aa10.45□□□□□ -0.74
Ttc39b-201ENSMUST00000030205 1700020N15RikL7MTX3 112 aa10.45□□□□□ -0.74
Ttc39b-201ENSMUST00000030205 CckP09240 115 aa10.45□□□□□ -0.74
Ttc39b-201ENSMUST00000030205 S100a1P56565 94 aa10.44□□□□□ -0.74
Ttc39b-201ENSMUST00000030205 G0s2Q61585 103 aa10.44□□□□□ -0.74
Ttc39b-201ENSMUST00000030205 Tal2Q62282 108 aa10.44□□□□□ -0.74
Ttc39b-201ENSMUST00000030205 9530003J23RikQ8BM26 151 aa10.44□□□□□ -0.74
Ttc39b-201ENSMUST00000030205 Gm11555B1AQ89 175 aa10.42□□□□□ -0.74
Ttc39b-201ENSMUST00000030205 Ighv10-3A0A075B5T6 119 aa10.41□□□□□ -0.74
Ttc39b-201ENSMUST00000030205 Vps25Q9CQ80 176 aa10.39□□□□□ -0.75
Ttc39b-201ENSMUST00000030205 Gm12353A2AGJ4 60 aa10.37□□□□□ -0.75
Ttc39b-201ENSMUST00000030205 Gm11596B1AQB0 205 aa10.37□□□□□ -0.75
Ttc39b-201ENSMUST00000030205 Igkv3-3A0A140T8Q0 119 aa10.32□□□□□ -0.76
Ttc39b-201ENSMUST00000030205 7530416G11RikJ3QJX6 159 aa10.32□□□□□ -0.76
Retrieved 100 of 22,080 RNA–protein pairs in 11.9 ms