RNA–Protein interactions for RNA: ENSMUST00000026665.7

Cbx4-201, Transcript of E3 SUMO-protein ligase CBX4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Cbx4, Length 5,179 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cbx4-201ENSMUST00000026665 Fam104aA2A6P4 185 aa13,03□□□□□ -0,32
Cbx4-201ENSMUST00000026665 Defb9Q8R2I6 67 aa13,03□□□□□ -0,32
Cbx4-201ENSMUST00000026665 Lama1P19137 3084 aa13,03□□□□□ -0,32
Cbx4-201ENSMUST00000026665 Celsr3Q91ZI0 3301 aa13,02□□□□□ -0,32
Cbx4-201ENSMUST00000026665 Frem2Q6NVD0 3160 aa13,01□□□□□ -0,33
Cbx4-201ENSMUST00000026665 Uqcr11Q9CPX8 56 aa13□□□□□ -0,33
Cbx4-201ENSMUST00000026665 Gm10643Q3URG9 111 aa13□□□□□ -0,33
Cbx4-201ENSMUST00000026665 Anapc11Q9CPX9 84 aa12,95□□□□□ -0,34
Cbx4-201ENSMUST00000026665 Kmt2bO08550 2713 aa12,95□□□□□ -0,34
Cbx4-201ENSMUST00000026665 Cypt15B1AXS0 87 aa12,94□□□□□ -0,34
Cbx4-201ENSMUST00000026665 Defb11Q8R2I7 77 aa12,94□□□□□ -0,34
Cbx4-201ENSMUST00000026665 FryE9Q8I9 3020 aa12,94□□□□□ -0,34
Cbx4-201ENSMUST00000026665 Zcchc13Q9D548 170 aa12,92□□□□□ -0,34
Cbx4-201ENSMUST00000026665 AW011738F6S7Q2 159 aa12,9□□□□□ -0,34
Cbx4-201ENSMUST00000026665 Phxr5P08399 672 aa12,9□□□□□ -0,34
Cbx4-201ENSMUST00000026665 Celsr1O35161 3034 aa12,89□□□□□ -0,35
Cbx4-201ENSMUST00000026665 Stab1Q8R4Y4 2571 aa12,89□□□□□ -0,35
Cbx4-201ENSMUST00000026665 Wdfy4E9Q2M9 3149 aa12,88□□□□□ -0,35
Cbx4-201ENSMUST00000026665 Plac8Q9JI48 112 aa12,87□□□□□ -0,35
Cbx4-201ENSMUST00000026665 Gm7138L7N2C3 230 aa12,86□□□□□ -0,35
Cbx4-201ENSMUST00000026665 Gm3238W4VSP7 230 aa12,86□□□□□ -0,35
Cbx4-201ENSMUST00000026665 Akap13E9Q394 2776 aa12,86□□□□□ -0,35
Cbx4-201ENSMUST00000026665 Mp68P56379 58 aa12,84□□□□□ -0,35
Cbx4-201ENSMUST00000026665 A730071L15RikQ8C4X0 137 aa12,83□□□□□ -0,36
Cbx4-201ENSMUST00000026665 Brca2P97929 3329 aa12,83□□□□□ -0,36
Cbx4-201ENSMUST00000026665 Chd6A3KFM7 2711 aa12,79□□□□□ -0,36
Cbx4-201ENSMUST00000026665 RetnlbQ99P86 105 aa12,79□□□□□ -0,36
Cbx4-201ENSMUST00000026665 Muc2Q80Z19 2680 aa12,78□□□□□ -0,36
Cbx4-201ENSMUST00000026665 BptfA2A654 3036 aaKnown RBP12,78□□□□□ -0,36
Cbx4-201ENSMUST00000026665 Col6a3E9PWQ3 3284 aa12,76□□□□□ -0,37
Cbx4-201ENSMUST00000026665 Dmxl2Q8BPN8 3032 aa12,76□□□□□ -0,37
Cbx4-201ENSMUST00000026665 Ubr5Q80TP3 2792 aa12,74□□□□□ -0,37
Cbx4-201ENSMUST00000026665 Itpr3P70227 2670 aa12,73□□□□□ -0,37
Cbx4-201ENSMUST00000026665 Gm7137J3QMW1 236 aa12,69□□□□□ -0,38
Cbx4-201ENSMUST00000026665 2310034C09RikQ9D746 214 aa12,67□□□□□ -0,38
Cbx4-201ENSMUST00000026665 Cypt14J3QPF7 87 aa12,67□□□□□ -0,38
Cbx4-201ENSMUST00000026665 SmcpP15265 143 aa12,67□□□□□ -0,38
Cbx4-201ENSMUST00000026665 Mast4Q811L6 2618 aa12,66□□□□□ -0,38
Cbx4-201ENSMUST00000026665 Adgrg4B7ZCC9 3073 aa12,65□□□□□ -0,38
Cbx4-201ENSMUST00000026665 Sprr1aQ62266 144 aa12,62□□□□□ -0,39
Cbx4-201ENSMUST00000026665 6030445D17RikE9Q8F9 148 aa12,61□□□□□ -0,39
Cbx4-201ENSMUST00000026665 Gm21798J3QNU5 87 aa12,6□□□□□ -0,39
Cbx4-201ENSMUST00000026665 Gm10139O88245 57 aa12,6□□□□□ -0,39
Cbx4-201ENSMUST00000026665 NbeaQ9EPN1 2936 aa12,58□□□□□ -0,4
Cbx4-201ENSMUST00000026665 VcanQ62059 3357 aa12,57□□□□□ -0,4
Cbx4-201ENSMUST00000026665 Gm10065F6TJM2 114 aa12,57□□□□□ -0,4
Cbx4-201ENSMUST00000026665 NbdyA0A0N4SUI7 68 aa12,56□□□□□ -0,4
Cbx4-201ENSMUST00000026665 Gm26620Q9CY65 116 aa12,54□□□□□ -0,4
Cbx4-201ENSMUST00000026665 DspE9Q557 2883 aaKnown RBP12,5□□□□□ -0,41
Cbx4-201ENSMUST00000026665 Odf3bQ5M8M2 238 aa12,48□□□□□ -0,41
Cbx4-201ENSMUST00000026665 Utp20Q5XG71 2788 aaKnown RBP12,47□□□□□ -0,41
Cbx4-201ENSMUST00000026665 Rnase13Q5GAM7 153 aa12,46□□□□□ -0,41
Cbx4-201ENSMUST00000026665 Gm9508A0A1W2P7W0 230 aa12,42□□□□□ -0,42
Cbx4-201ENSMUST00000026665 Zzef1Q5SSH7 2924 aa12,42□□□□□ -0,42
Cbx4-201ENSMUST00000026665 Wdfy3Q6VNB8 3508 aa12,41□□□□□ -0,42
Cbx4-201ENSMUST00000026665 Tep1P97499 2629 aa12,41□□□□□ -0,42
Cbx4-201ENSMUST00000026665 Gm20538F6Z9R1 75 aa12,41□□□□□ -0,42
Cbx4-201ENSMUST00000026665 Gm37013Q8K491 104 aa12,39□□□□□ -0,43
Cbx4-201ENSMUST00000026665 Gm3646F6S692 53 aa12,38□□□□□ -0,43
Cbx4-201ENSMUST00000026665 Col6a5A6H584 2640 aa12,37□□□□□ -0,43
Cbx4-201ENSMUST00000026665 FlncQ8VHX6 2726 aaKnown RBP12,37□□□□□ -0,43
Cbx4-201ENSMUST00000026665 Stab2Q8R4U0 2559 aa12,36□□□□□ -0,43
Cbx4-201ENSMUST00000026665 Dchs2A0A0A6YW72 3346 aa12,35□□□□□ -0,43
Cbx4-201ENSMUST00000026665 Nbeal2Q6ZQA0 2742 aa12,35□□□□□ -0,43
Cbx4-201ENSMUST00000026665 Tex15F8VPN2 2785 aa12,33□□□□□ -0,43
Cbx4-201ENSMUST00000026665 Gm3880A0A1B0GSB3 72 aa12,33□□□□□ -0,44
Cbx4-201ENSMUST00000026665 Dchs1E9PVD3 3291 aa12,33□□□□□ -0,44
Cbx4-201ENSMUST00000026665 Igsf10Q3V1M1 2594 aa12,32□□□□□ -0,44
Cbx4-201ENSMUST00000026665 Gm16253D3Z167 63 aa12,3□□□□□ -0,44
Cbx4-201ENSMUST00000026665 Hivep1Q03172 2688 aa12,3□□□□□ -0,44
Cbx4-201ENSMUST00000026665 Gm36176A0A1W2P8D5 158 aa12,29□□□□□ -0,44
Cbx4-201ENSMUST00000026665 Pkd1l1Q8R526 2615 aa12,26□□□□□ -0,45
Cbx4-201ENSMUST00000026665 Igfn1Q3KNY0 2849 aa12,26□□□□□ -0,45
Cbx4-201ENSMUST00000026665 4933415A04RikQ9D443 101 aa12,25□□□□□ -0,45
Cbx4-201ENSMUST00000026665 Gm4491E0CX42 125 aa12,25□□□□□ -0,45
Cbx4-201ENSMUST00000026665 RelnQ60841 3461 aa12,23□□□□□ -0,45
Cbx4-201ENSMUST00000026665 Trank1Q8BV79 2999 aa12,22□□□□□ -0,45
Cbx4-201ENSMUST00000026665 Myo15aQ9QZZ4 3511 aa12,18□□□□□ -0,46
Cbx4-201ENSMUST00000026665 OxtP35454 125 aa12,17□□□□□ -0,46
Cbx4-201ENSMUST00000026665 CriptO70333 101 aa12,17□□□□□ -0,46
Cbx4-201ENSMUST00000026665 9530053A07RikE9PVG8 2581 aa12,17□□□□□ -0,46
Cbx4-201ENSMUST00000026665 Gm9955Q8CEJ8 102 aa12,16□□□□□ -0,46
Cbx4-201ENSMUST00000026665 Gm17349F7BGH6 99 aa12,15□□□□□ -0,47
Cbx4-201ENSMUST00000026665 Celsr2Q9R0M0 2920 aa12,13□□□□□ -0,47
Cbx4-201ENSMUST00000026665 Chd9Q8BYH8 2885 aa12,13□□□□□ -0,47
Cbx4-201ENSMUST00000026665 1700042G07RikB1AUF7 90 aa12,1□□□□□ -0,47
Cbx4-201ENSMUST00000026665 DmdP11531 3678 aa12,1□□□□□ -0,47
Cbx4-201ENSMUST00000026665 Itpr2Q9Z329 2701 aa12,08□□□□□ -0,48
Cbx4-201ENSMUST00000026665 SpegQ62407 3262 aa12,07□□□□□ -0,48
Cbx4-201ENSMUST00000026665 Gm9821Q8K076 103 aa12,06□□□□□ -0,48
Cbx4-201ENSMUST00000026665 Gm2310J3QNJ2 377 aa12,03□□□□□ -0,48
Cbx4-201ENSMUST00000026665 Krtap29-1A2A5X4 342 aa12,03□□□□□ -0,48
Cbx4-201ENSMUST00000026665 Nf1Q04690 2841 aa12,01□□□□□ -0,49
Cbx4-201ENSMUST00000026665 TgO08710 2766 aa11,94□□□□□ -0,5
Cbx4-201ENSMUST00000026665 ApcQ61315 2845 aa11,92□□□□□ -0,5
Cbx4-201ENSMUST00000026665 2310061N02RikQ9D6S9 174 aa11,87□□□□□ -0,51
Cbx4-201ENSMUST00000026665 Krtap13O88375 197 aa11,86□□□□□ -0,51
Cbx4-201ENSMUST00000026665 Akap9Q70FJ1 3797 aa11,86□□□□□ -0,51
Cbx4-201ENSMUST00000026665 Vps13cQ8BX70 3748 aa11,86□□□□□ -0,51
Cbx4-201ENSMUST00000026665 2310050C09RikG5E8Z3 280 aa11,85□□□□□ -0,51
Retrieved 100 of 22,080 RNA–protein pairs in 32,1 ms