RNA–Protein interactions for RNA: ENSMUST00000026665.7

Cbx4-201, Transcript of E3 SUMO-protein ligase CBX4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Cbx4, Length 5,179 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cbx4-201ENSMUST00000026665 Rhox8Q6VSS7 320 aa35.87■■■■□ 3.33
Cbx4-201ENSMUST00000026665 Rpgrip1Q9EPQ2 1331 aa33.55■■■□□ 2.96
Cbx4-201ENSMUST00000026665 Ehmt2Q9Z148 1263 aaKnown RBP32.89■■■□□ 2.86
Cbx4-201ENSMUST00000026665 NischQ80TM9 1593 aa32.22■■■□□ 2.75
Cbx4-201ENSMUST00000026665 Ccdc136Q3TVA9 1136 aa32.12■■■□□ 2.73
Cbx4-201ENSMUST00000026665 Las1lA2BE28 776 aaKnown RBP31.79■■■□□ 2.68
Cbx4-201ENSMUST00000026665 Zeb1Q64318 1117 aa31.54■■■□□ 2.64
Cbx4-201ENSMUST00000026665 Wdr66E9Q743 1299 aa31.5■■■□□ 2.63
Cbx4-201ENSMUST00000026665 Cngb1E1AZ71 1325 aa31.5■■■□□ 2.63
Cbx4-201ENSMUST00000026665 Acin1Q9JIX8 1338 aaKnown RBP31.48■■■□□ 2.63
Cbx4-201ENSMUST00000026665 Trim41Q5NCC3 630 aa31.42■■■□□ 2.62
Cbx4-201ENSMUST00000026665 Gab3Q8BSM5 595 aa31.39■■■□□ 2.62
Cbx4-201ENSMUST00000026665 Esf1Q3V1V3 845 aaKnown RBP31.25■■■□□ 2.59
Cbx4-201ENSMUST00000026665 Ccdc180J3QNE4 1664 aa30.87■■■□□ 2.53
Cbx4-201ENSMUST00000026665 HrcG5E8J6 738 aa30.69■■■□□ 2.5
Cbx4-201ENSMUST00000026665 NefmP08553 848 aa30.68■■■□□ 2.5
Cbx4-201ENSMUST00000026665 Npm2Q80W85 207 aa30.64■■■□□ 2.5
Cbx4-201ENSMUST00000026665 Myt1lP97500 1187 aa30.63■■■□□ 2.49
Cbx4-201ENSMUST00000026665 Pcgf6Q99NA9 353 aa30.61■■■□□ 2.49
Cbx4-201ENSMUST00000026665 Ube2uB1AUC4 352 aa30.51■■■□□ 2.47
Cbx4-201ENSMUST00000026665 Pelp1Q9DBD5 1123 aaKnown RBP30.49■■■□□ 2.47
Cbx4-201ENSMUST00000026665 Rtl1Q7M732 1744 aa30.46■■■□□ 2.47
Cbx4-201ENSMUST00000026665 CenpbP27790 599 aa30.41■■■□□ 2.46
Cbx4-201ENSMUST00000026665 UbtfP25976 765 aaKnown RBP30.4■■■□□ 2.46
Cbx4-201ENSMUST00000026665 Abcc9P70170 1546 aa30.37■■■□□ 2.45
Cbx4-201ENSMUST00000026665 Supt5hO55201 1082 aaKnown RBP30■■■□□ 2.39
Cbx4-201ENSMUST00000026665 Cdk11bP24788 784 aaKnown RBP29.98■■■□□ 2.39
Cbx4-201ENSMUST00000026665 Stra8P70278 393 aa29.81■■■□□ 2.36
Cbx4-201ENSMUST00000026665 Nop58Q6DFW4 536 aaKnown RBP29.7■■■□□ 2.35
Cbx4-201ENSMUST00000026665 Abcc8B2RUS7 1588 aa29.69■■■□□ 2.34
Cbx4-201ENSMUST00000026665 Slc24a1Q91WD8 1130 aa29.66■■■□□ 2.34
Cbx4-201ENSMUST00000026665 Zcchc6Q5BLK4 1491 aaKnown RBP29.62■■■□□ 2.33
Cbx4-201ENSMUST00000026665 Ppargc1bQ8VHJ7 1014 aa29.58■■■□□ 2.33
Cbx4-201ENSMUST00000026665 Mier1Q5UAK0 511 aa29.47■■■□□ 2.31
Cbx4-201ENSMUST00000026665 Myt1Q8CFC2 1127 aa29.45■■■□□ 2.3
Cbx4-201ENSMUST00000026665 Il27Q8K3I6 234 aa29.35■■■□□ 2.29
Cbx4-201ENSMUST00000026665 Tnnt3Q9QZ47 272 aa29.34■■■□□ 2.29
Cbx4-201ENSMUST00000026665 Amer1Q7TS75 1132 aa29.31■■■□□ 2.28
Cbx4-201ENSMUST00000026665 TonslQ6NZL6 1363 aa29.28■■■□□ 2.28
Cbx4-201ENSMUST00000026665 Ap3b1Q9Z1T1 1105 aa29.22■■■□□ 2.27
Cbx4-201ENSMUST00000026665 Fam50aQ9WV03 339 aaKnown RBP29.21■■■□□ 2.27
Cbx4-201ENSMUST00000026665 NclP09405 707 aaKnown RBP29.2■■■□□ 2.26
Cbx4-201ENSMUST00000026665 Neurod1Q60867 357 aa29.1■■■□□ 2.25
Cbx4-201ENSMUST00000026665 Dcaf1Q80TR8 1506 aa29.05■■■□□ 2.24
Cbx4-201ENSMUST00000026665 NrdcQ8BHG1 1161 aa28.98■■■□□ 2.23
Cbx4-201ENSMUST00000026665 Gm35339A0A140LHH9 1649 aa28.98■■■□□ 2.23
Cbx4-201ENSMUST00000026665 ClspnQ80YR7 1315 aa28.96■■■□□ 2.23
Cbx4-201ENSMUST00000026665 Ttbk1Q6PCN3 1308 aa28.96■■■□□ 2.23
Cbx4-201ENSMUST00000026665 Eif5bQ05D44 1216 aaKnown RBP28.91■■■□□ 2.22
Cbx4-201ENSMUST00000026665 Sall2Q9QX96 1004 aa28.88■■■□□ 2.21
Cbx4-201ENSMUST00000026665 Plekhg3Q4VAC9 1341 aa28.76■■■□□ 2.19
Cbx4-201ENSMUST00000026665 Cep164Q5DU05 1446 aa28.72■■■□□ 2.19
Cbx4-201ENSMUST00000026665 Anks4bQ8K3X6 423 aa28.7■■■□□ 2.19
Cbx4-201ENSMUST00000026665 Anp32bQ9EST5 272 aaKnown RBP28.66■■■□□ 2.18
Cbx4-201ENSMUST00000026665 Chic1Q8CBW7 227 aa28.64■■■□□ 2.18
Cbx4-201ENSMUST00000026665 Csrnp3P59055 597 aa28.64■■■□□ 2.18
Cbx4-201ENSMUST00000026665 4933416C03RikQ3V063 378 aa28.62■■■□□ 2.17
Cbx4-201ENSMUST00000026665 NeflP08551 543 aa28.58■■■□□ 2.17
Cbx4-201ENSMUST00000026665 Gm38655A0A286YDK6 273 aa28.54■■■□□ 2.16
Cbx4-201ENSMUST00000026665 Rtl5Q5DTT4 599 aa28.54■■■□□ 2.16
Cbx4-201ENSMUST00000026665 Lmod2Q3UHZ5 550 aa28.46■■■□□ 2.15
Cbx4-201ENSMUST00000026665 Anp32aO35381 247 aa28.45■■■□□ 2.15
Cbx4-201ENSMUST00000026665 Eid3Q3V124 375 aa28.45■■■□□ 2.14
Cbx4-201ENSMUST00000026665 Mapk8ip2Q9ERE9 830 aa28.43■■■□□ 2.14
Cbx4-201ENSMUST00000026665 Aplp2Q06335 707 aa28.37■■■□□ 2.13
Cbx4-201ENSMUST00000026665 Brd4Q9ESU6 1400 aaKnown RBP28.36■■■□□ 2.13
Cbx4-201ENSMUST00000026665 Rb1cc1Q9ESK9 1588 aa28.32■■■□□ 2.12
Cbx4-201ENSMUST00000026665 Clip1Q922J3 1391 aa28.28■■■□□ 2.12
Cbx4-201ENSMUST00000026665 DiexfQ8BTT6 772 aaKnown RBP28.26■■■□□ 2.11
Cbx4-201ENSMUST00000026665 Os9Q8K2C7 672 aa28.16■■■□□ 2.1
Cbx4-201ENSMUST00000026665 Npm1Q61937 292 aaKnown RBP28.07■■■□□ 2.08
Cbx4-201ENSMUST00000026665 1700123L14RikQ3V2K7 440 aa28.01■■■□□ 2.07
Cbx4-201ENSMUST00000026665 Aebp2Q9Z248 504 aaKnown RBP27.97■■■□□ 2.07
Cbx4-201ENSMUST00000026665 Zbtb7cQ8VCZ7 619 aa27.92■■■□□ 2.06
Cbx4-201ENSMUST00000026665 Calr4Q3TQS0 420 aa27.9■■■□□ 2.06
Cbx4-201ENSMUST00000026665 DaxxO35613 739 aa27.87■■■□□ 2.05
Cbx4-201ENSMUST00000026665 Ccer2J3QPU5 274 aa27.83■■■□□ 2.05
Cbx4-201ENSMUST00000026665 Zbtb4Q5F293 982 aa27.79■■■□□ 2.04
Cbx4-201ENSMUST00000026665 4930567H17RikQ3V0K5 233 aa27.78■■■□□ 2.04
Cbx4-201ENSMUST00000026665 Ppp4r2Q0VGB7 417 aa27.77■■■□□ 2.04
Cbx4-201ENSMUST00000026665 NacadQ5SWP3 1504 aa27.75■■■□□ 2.03
Cbx4-201ENSMUST00000026665 Baz1aO88379 1555 aa27.74■■■□□ 2.03
Cbx4-201ENSMUST00000026665 Hnrnpul2Q00PI9 745 aaKnown RBP27.7■■■□□ 2.02
Cbx4-201ENSMUST00000026665 Golga3P55937 1487 aa27.6■■■□□ 2.01
Cbx4-201ENSMUST00000026665 Wdr43Q6ZQL4 677 aaKnown RBP27.6■■■□□ 2.01
Cbx4-201ENSMUST00000026665 Mrs2Q5NCE8 434 aa27.6■■■□□ 2.01
Cbx4-201ENSMUST00000026665 BlmO88700 1416 aa27.6■■■□□ 2.01
Cbx4-201ENSMUST00000026665 Rsf1E9PWW9 1441 aaKnown RBP27.55■■■□□ 2
Cbx4-201ENSMUST00000026665 Chic2Q9D9G3 165 aa27.54■■■□□ 2
Cbx4-201ENSMUST00000026665 Fam71e1A1L3C1 212 aa27.53■■■□□ 2
Cbx4-201ENSMUST00000026665 Setd5Q5XJV7 1441 aa27.48■■□□□ 1.99
Cbx4-201ENSMUST00000026665 Nlrp6Q91WS2 869 aa27.47■■□□□ 1.99
Cbx4-201ENSMUST00000026665 Erich6D3Z6S9 713 aa27.41■■□□□ 1.98
Cbx4-201ENSMUST00000026665 Kdm5dQ62240 1548 aa27.39■■□□□ 1.98
Cbx4-201ENSMUST00000026665 Prdm10Q3UTQ7 1184 aa27.38■■□□□ 1.97
Cbx4-201ENSMUST00000026665 ArxO35085 564 aa27.36■■□□□ 1.97
Cbx4-201ENSMUST00000026665 Polr3glQ8R0C0 218 aa27.35■■□□□ 1.97
Cbx4-201ENSMUST00000026665 Upf2A2AT37 1269 aaKnown RBP27.32■■□□□ 1.96
Cbx4-201ENSMUST00000026665 Rad21Q61550 635 aaKnown RBP27.3■■□□□ 1.96
Cbx4-201ENSMUST00000026665 Fkbp15Q6P9Q6 1216 aaKnown RBP27.26■■□□□ 1.95
Retrieved 100 of 22,080 RNA–protein pairs in 12.9 ms