RNA–Protein interactions for RNA: ENSMUST00000026665.7

Cbx4-201, Transcript of E3 SUMO-protein ligase CBX4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Cbx4, Length 5,179 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cbx4-201ENSMUST00000026665 Rhox8Q6VSS7 320 aa35.87■■■■□ 3.33
Cbx4-201ENSMUST00000026665 Rpgrip1Q9EPQ2 1331 aa33.55■■■□□ 2.96
Cbx4-201ENSMUST00000026665 Ehmt2Q9Z148 1263 aaKnown RBP32.89■■■□□ 2.86
Cbx4-201ENSMUST00000026665 NischQ80TM9 1593 aa32.22■■■□□ 2.75
Cbx4-201ENSMUST00000026665 Ccdc136Q3TVA9 1136 aa32.12■■■□□ 2.73
Cbx4-201ENSMUST00000026665 Las1lA2BE28 776 aaKnown RBP31.79■■■□□ 2.68
Cbx4-201ENSMUST00000026665 Zeb1Q64318 1117 aa31.54■■■□□ 2.64
Cbx4-201ENSMUST00000026665 Wdr66E9Q743 1299 aa31.5■■■□□ 2.63
Cbx4-201ENSMUST00000026665 Cngb1E1AZ71 1325 aa31.5■■■□□ 2.63
Cbx4-201ENSMUST00000026665 Acin1Q9JIX8 1338 aaKnown RBP31.48■■■□□ 2.63
Cbx4-201ENSMUST00000026665 Trim41Q5NCC3 630 aa31.42■■■□□ 2.62
Cbx4-201ENSMUST00000026665 Gab3Q8BSM5 595 aa31.39■■■□□ 2.62
Cbx4-201ENSMUST00000026665 Esf1Q3V1V3 845 aaKnown RBP31.25■■■□□ 2.59
Cbx4-201ENSMUST00000026665 Ccdc180J3QNE4 1664 aa30.87■■■□□ 2.53
Cbx4-201ENSMUST00000026665 HrcG5E8J6 738 aa30.69■■■□□ 2.5
Cbx4-201ENSMUST00000026665 NefmP08553 848 aa30.68■■■□□ 2.5
Cbx4-201ENSMUST00000026665 Npm2Q80W85 207 aa30.64■■■□□ 2.5
Cbx4-201ENSMUST00000026665 Myt1lP97500 1187 aa30.63■■■□□ 2.49
Cbx4-201ENSMUST00000026665 Pcgf6Q99NA9 353 aa30.61■■■□□ 2.49
Cbx4-201ENSMUST00000026665 Ube2uB1AUC4 352 aa30.51■■■□□ 2.47
Cbx4-201ENSMUST00000026665 Pelp1Q9DBD5 1123 aaKnown RBP30.49■■■□□ 2.47
Cbx4-201ENSMUST00000026665 Rtl1Q7M732 1744 aa30.46■■■□□ 2.47
Cbx4-201ENSMUST00000026665 CenpbP27790 599 aa30.41■■■□□ 2.46
Cbx4-201ENSMUST00000026665 UbtfP25976 765 aaKnown RBP30.4■■■□□ 2.46
Cbx4-201ENSMUST00000026665 Abcc9P70170 1546 aa30.37■■■□□ 2.45
Cbx4-201ENSMUST00000026665 Supt5hO55201 1082 aaKnown RBP30■■■□□ 2.39
Cbx4-201ENSMUST00000026665 Cdk11bP24788 784 aaKnown RBP29.98■■■□□ 2.39
Cbx4-201ENSMUST00000026665 Stra8P70278 393 aa29.81■■■□□ 2.36
Cbx4-201ENSMUST00000026665 Nop58Q6DFW4 536 aaKnown RBP29.7■■■□□ 2.35
Cbx4-201ENSMUST00000026665 Abcc8B2RUS7 1588 aa29.69■■■□□ 2.34
Cbx4-201ENSMUST00000026665 Slc24a1Q91WD8 1130 aa29.66■■■□□ 2.34
Cbx4-201ENSMUST00000026665 Zcchc6Q5BLK4 1491 aaKnown RBP29.62■■■□□ 2.33
Cbx4-201ENSMUST00000026665 Ppargc1bQ8VHJ7 1014 aa29.58■■■□□ 2.33
Cbx4-201ENSMUST00000026665 Mier1Q5UAK0 511 aa29.47■■■□□ 2.31
Cbx4-201ENSMUST00000026665 Myt1Q8CFC2 1127 aa29.45■■■□□ 2.3
Cbx4-201ENSMUST00000026665 Il27Q8K3I6 234 aa29.35■■■□□ 2.29
Cbx4-201ENSMUST00000026665 Tnnt3Q9QZ47 272 aa29.34■■■□□ 2.29
Cbx4-201ENSMUST00000026665 Amer1Q7TS75 1132 aa29.31■■■□□ 2.28
Cbx4-201ENSMUST00000026665 TonslQ6NZL6 1363 aa29.28■■■□□ 2.28
Cbx4-201ENSMUST00000026665 Ap3b1Q9Z1T1 1105 aa29.22■■■□□ 2.27
Cbx4-201ENSMUST00000026665 Fam50aQ9WV03 339 aaKnown RBP29.21■■■□□ 2.27
Cbx4-201ENSMUST00000026665 NclP09405 707 aaKnown RBP29.2■■■□□ 2.26
Cbx4-201ENSMUST00000026665 Neurod1Q60867 357 aa29.1■■■□□ 2.25
Cbx4-201ENSMUST00000026665 Dcaf1Q80TR8 1506 aa29.05■■■□□ 2.24
Cbx4-201ENSMUST00000026665 NrdcQ8BHG1 1161 aa28.98■■■□□ 2.23
Cbx4-201ENSMUST00000026665 Gm35339A0A140LHH9 1649 aa28.98■■■□□ 2.23
Cbx4-201ENSMUST00000026665 ClspnQ80YR7 1315 aa28.96■■■□□ 2.23
Cbx4-201ENSMUST00000026665 Ttbk1Q6PCN3 1308 aa28.96■■■□□ 2.23
Cbx4-201ENSMUST00000026665 Eif5bQ05D44 1216 aaKnown RBP28.91■■■□□ 2.22
Cbx4-201ENSMUST00000026665 Sall2Q9QX96 1004 aa28.88■■■□□ 2.21
Cbx4-201ENSMUST00000026665 Plekhg3Q4VAC9 1341 aa28.76■■■□□ 2.19
Cbx4-201ENSMUST00000026665 Cep164Q5DU05 1446 aa28.72■■■□□ 2.19
Cbx4-201ENSMUST00000026665 Anks4bQ8K3X6 423 aa28.7■■■□□ 2.19
Cbx4-201ENSMUST00000026665 Anp32bQ9EST5 272 aaKnown RBP28.66■■■□□ 2.18
Cbx4-201ENSMUST00000026665 Chic1Q8CBW7 227 aa28.64■■■□□ 2.18
Cbx4-201ENSMUST00000026665 Csrnp3P59055 597 aa28.64■■■□□ 2.18
Cbx4-201ENSMUST00000026665 4933416C03RikQ3V063 378 aa28.62■■■□□ 2.17
Cbx4-201ENSMUST00000026665 NeflP08551 543 aa28.58■■■□□ 2.17
Cbx4-201ENSMUST00000026665 Gm38655A0A286YDK6 273 aa28.54■■■□□ 2.16
Cbx4-201ENSMUST00000026665 Rtl5Q5DTT4 599 aa28.54■■■□□ 2.16
Cbx4-201ENSMUST00000026665 Lmod2Q3UHZ5 550 aa28.46■■■□□ 2.15
Cbx4-201ENSMUST00000026665 Anp32aO35381 247 aa28.45■■■□□ 2.15
Cbx4-201ENSMUST00000026665 Eid3Q3V124 375 aa28.45■■■□□ 2.14
Cbx4-201ENSMUST00000026665 Mapk8ip2Q9ERE9 830 aa28.43■■■□□ 2.14
Cbx4-201ENSMUST00000026665 Aplp2Q06335 707 aa28.37■■■□□ 2.13
Cbx4-201ENSMUST00000026665 Brd4Q9ESU6 1400 aaKnown RBP28.36■■■□□ 2.13
Cbx4-201ENSMUST00000026665 Rb1cc1Q9ESK9 1588 aa28.32■■■□□ 2.12
Cbx4-201ENSMUST00000026665 Clip1Q922J3 1391 aa28.28■■■□□ 2.12
Cbx4-201ENSMUST00000026665 DiexfQ8BTT6 772 aaKnown RBP28.26■■■□□ 2.11
Cbx4-201ENSMUST00000026665 Os9Q8K2C7 672 aa28.16■■■□□ 2.1
Cbx4-201ENSMUST00000026665 Npm1Q61937 292 aaKnown RBP28.07■■■□□ 2.08
Cbx4-201ENSMUST00000026665 1700123L14RikQ3V2K7 440 aa28.01■■■□□ 2.07
Cbx4-201ENSMUST00000026665 Aebp2Q9Z248 504 aaKnown RBP27.97■■■□□ 2.07
Cbx4-201ENSMUST00000026665 Zbtb7cQ8VCZ7 619 aa27.92■■■□□ 2.06
Cbx4-201ENSMUST00000026665 Calr4Q3TQS0 420 aa27.9■■■□□ 2.06
Cbx4-201ENSMUST00000026665 DaxxO35613 739 aa27.87■■■□□ 2.05
Cbx4-201ENSMUST00000026665 Ccer2J3QPU5 274 aa27.83■■■□□ 2.05
Cbx4-201ENSMUST00000026665 Zbtb4Q5F293 982 aa27.79■■■□□ 2.04
Cbx4-201ENSMUST00000026665 4930567H17RikQ3V0K5 233 aa27.78■■■□□ 2.04
Cbx4-201ENSMUST00000026665 Ppp4r2Q0VGB7 417 aa27.77■■■□□ 2.04
Cbx4-201ENSMUST00000026665 NacadQ5SWP3 1504 aa27.75■■■□□ 2.03
Cbx4-201ENSMUST00000026665 Baz1aO88379 1555 aa27.74■■■□□ 2.03
Cbx4-201ENSMUST00000026665 Hnrnpul2Q00PI9 745 aaKnown RBP27.7■■■□□ 2.02
Cbx4-201ENSMUST00000026665 Golga3P55937 1487 aa27.6■■■□□ 2.01
Cbx4-201ENSMUST00000026665 Wdr43Q6ZQL4 677 aaKnown RBP27.6■■■□□ 2.01
Cbx4-201ENSMUST00000026665 Mrs2Q5NCE8 434 aa27.6■■■□□ 2.01
Cbx4-201ENSMUST00000026665 BlmO88700 1416 aa27.6■■■□□ 2.01
Cbx4-201ENSMUST00000026665 Rsf1E9PWW9 1441 aaKnown RBP27.55■■■□□ 2
Cbx4-201ENSMUST00000026665 Chic2Q9D9G3 165 aa27.54■■■□□ 2
Cbx4-201ENSMUST00000026665 Fam71e1A1L3C1 212 aa27.53■■■□□ 2
Cbx4-201ENSMUST00000026665 Setd5Q5XJV7 1441 aa27.48■■□□□ 1.99
Cbx4-201ENSMUST00000026665 Nlrp6Q91WS2 869 aa27.47■■□□□ 1.99
Cbx4-201ENSMUST00000026665 Erich6D3Z6S9 713 aa27.41■■□□□ 1.98
Cbx4-201ENSMUST00000026665 Kdm5dQ62240 1548 aa27.39■■□□□ 1.98
Cbx4-201ENSMUST00000026665 Prdm10Q3UTQ7 1184 aa27.38■■□□□ 1.97
Cbx4-201ENSMUST00000026665 ArxO35085 564 aa27.36■■□□□ 1.97
Cbx4-201ENSMUST00000026665 Polr3glQ8R0C0 218 aa27.35■■□□□ 1.97
Cbx4-201ENSMUST00000026665 Upf2A2AT37 1269 aaKnown RBP27.32■■□□□ 1.96
Cbx4-201ENSMUST00000026665 Rad21Q61550 635 aaKnown RBP27.3■■□□□ 1.96
Cbx4-201ENSMUST00000026665 Fkbp15Q6P9Q6 1216 aaKnown RBP27.26■■□□□ 1.95
Retrieved 100 of 22,080 RNA–protein pairs in 12.8 ms