RNA–Protein interactions for RNA: ENSMUST00000024627.13

Chd1-202, Transcript of Chromodomain-helicase-DNA-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Chd1, Length 7,916 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1-202ENSMUST00000024627 Coa5Q99M07 74 aa9.13□□□□□ -0.95
Chd1-202ENSMUST00000024627 Tep1P97499 2629 aa9.12□□□□□ -0.95
Chd1-202ENSMUST00000024627 Wdfy3Q6VNB8 3508 aa9.12□□□□□ -0.95
Chd1-202ENSMUST00000024627 Myo15bI7HPW8 3033 aa9.12□□□□□ -0.95
Chd1-202ENSMUST00000024627 OxtP35454 125 aa9.11□□□□□ -0.95
Chd1-202ENSMUST00000024627 SpegQ62407 3262 aa9.11□□□□□ -0.95
Chd1-202ENSMUST00000024627 Gm9821Q8K076 103 aa9.1□□□□□ -0.95
Chd1-202ENSMUST00000024627 Krtap16-1A2A5X5 502 aa9.08□□□□□ -0.96
Chd1-202ENSMUST00000024627 Sprr4Q8CGN8 76 aa9.07□□□□□ -0.96
Chd1-202ENSMUST00000024627 CriptO70333 101 aa9.06□□□□□ -0.96
Chd1-202ENSMUST00000024627 Crip3Q6Q6R3 243 aa9.05□□□□□ -0.96
Chd1-202ENSMUST00000024627 Cypt15B1AXS0 87 aa9.05□□□□□ -0.96
Chd1-202ENSMUST00000024627 Celsr1O35161 3034 aa9.04□□□□□ -0.96
Chd1-202ENSMUST00000024627 Fbn2Q61555 2907 aa9.04□□□□□ -0.96
Chd1-202ENSMUST00000024627 Chd7A2AJK6 2986 aaKnown RBP9.04□□□□□ -0.96
Chd1-202ENSMUST00000024627 9530053A07RikE9PVG8 2581 aa9.03□□□□□ -0.96
Chd1-202ENSMUST00000024627 Nbeal2Q6ZQA0 2742 aa9.03□□□□□ -0.96
Chd1-202ENSMUST00000024627 Chd6A3KFM7 2711 aa9.01□□□□□ -0.97
Chd1-202ENSMUST00000024627 Gm10308Q9CVR5 141 aa9.01□□□□□ -0.97
Chd1-202ENSMUST00000024627 Gm7138L7N2C3 230 aa9□□□□□ -0.97
Chd1-202ENSMUST00000024627 Gm3238W4VSP7 230 aa9□□□□□ -0.97
Chd1-202ENSMUST00000024627 Gm7137J3QMW1 236 aa8.98□□□□□ -0.97
Chd1-202ENSMUST00000024627 Smr3aQ61900 147 aa8.98□□□□□ -0.97
Chd1-202ENSMUST00000024627 Itpr1P11881 2749 aa8.95□□□□□ -0.98
Chd1-202ENSMUST00000024627 Chtf8P0CG14 533 aa8.95□□□□□ -0.98
Chd1-202ENSMUST00000024627 Sprr1bQ62267 153 aa8.95□□□□□ -0.98
Chd1-202ENSMUST00000024627 A330070K13RikQ8CA53 115 aa8.94□□□□□ -0.98
Chd1-202ENSMUST00000024627 Gm26620Q9CY65 116 aa8.94□□□□□ -0.98
Chd1-202ENSMUST00000024627 2310034C09RikQ9D746 214 aa8.94□□□□□ -0.98
Chd1-202ENSMUST00000024627 Uqcr11Q9CPX8 56 aa8.94□□□□□ -0.98
Chd1-202ENSMUST00000024627 AW011738F6S7Q2 159 aa8.93□□□□□ -0.98
Chd1-202ENSMUST00000024627 AY074887Q8R5F9 132 aa8.93□□□□□ -0.98
Chd1-202ENSMUST00000024627 Eif4ebp3Q80VV3 101 aa8.93□□□□□ -0.98
Chd1-202ENSMUST00000024627 Rps28P62858 69 aaKnown RBP8.92□□□□□ -0.98
Chd1-202ENSMUST00000024627 Tnrc18Q80WC3 2878 aa8.92□□□□□ -0.98
Chd1-202ENSMUST00000024627 ApcQ61315 2845 aa8.91□□□□□ -0.98
Chd1-202ENSMUST00000024627 Ubr5Q80TP3 2792 aa8.91□□□□□ -0.98
Chd1-202ENSMUST00000024627 Gm3880A0A1B0GSB3 72 aa8.9□□□□□ -0.98
Chd1-202ENSMUST00000024627 Col6a5A6H584 2640 aa8.89□□□□□ -0.99
Chd1-202ENSMUST00000024627 Gm21798J3QNU5 87 aa8.88□□□□□ -0.99
Chd1-202ENSMUST00000024627 C530025M09RikF6RGA8 229 aa8.87□□□□□ -0.99
Chd1-202ENSMUST00000024627 Phxr4P15974 95 aa8.85□□□□□ -0.99
Chd1-202ENSMUST00000024627 Psors1c2Q80ZC9 134 aa8.85□□□□□ -0.99
Chd1-202ENSMUST00000024627 Prr13Q9CQJ5 137 aa8.85□□□□□ -0.99
Chd1-202ENSMUST00000024627 Krtap15-1Q9QZU5 150 aa8.84□□□□□ -0.99
Chd1-202ENSMUST00000024627 Gm7276Q3TYW4 209 aa8.84□□□□□ -0.99
Chd1-202ENSMUST00000024627 Trank1Q8BV79 2999 aa8.82□□□□□ -1
Chd1-202ENSMUST00000024627 Krtap26-1Q9D7N2 215 aa8.82□□□□□ -1
Chd1-202ENSMUST00000024627 Adgrg4B7ZCC9 3073 aa8.82□□□□□ -1
Chd1-202ENSMUST00000024627 Lypd5Q9D7Z7 256 aa8.82□□□□□ -1
Chd1-202ENSMUST00000024627 Zzef1Q5SSH7 2924 aa8.81□□□□□ -1
Chd1-202ENSMUST00000024627 Itpr2Q9Z329 2701 aa8.8□□□□□ -1
Chd1-202ENSMUST00000024627 Akap9Q70FJ1 3797 aa8.8□□□□□ -1
Chd1-202ENSMUST00000024627 Stab2Q8R4U0 2559 aa8.76□□□□□ -1.01
Chd1-202ENSMUST00000024627 Gm9508A0A1W2P7W0 230 aa8.76□□□□□ -1.01
Chd1-202ENSMUST00000024627 Utp20Q5XG71 2788 aaKnown RBP8.76□□□□□ -1.01
Chd1-202ENSMUST00000024627 Gm4491E0CX42 125 aa8.75□□□□□ -1.01
Chd1-202ENSMUST00000024627 6030445D17RikE9Q8F9 148 aa8.75□□□□□ -1.01
Chd1-202ENSMUST00000024627 Smim29Q8R043 75 aa8.75□□□□□ -1.01
Chd1-202ENSMUST00000024627 DmdP11531 3678 aa8.73□□□□□ -1.01
Chd1-202ENSMUST00000024627 Gm11213A0A1B0GR83 88 aa8.72□□□□□ -1.01
Chd1-202ENSMUST00000024627 Camk2n1Q6QWF9 78 aa8.7□□□□□ -1.02
Chd1-202ENSMUST00000024627 Gm9955Q8CEJ8 102 aa8.7□□□□□ -1.02
Chd1-202ENSMUST00000024627 CnbpP53996 178 aaKnown RBP8.69□□□□□ -1.02
Chd1-202ENSMUST00000024627 Fam229bQ8CF36 80 aa8.69□□□□□ -1.02
Chd1-202ENSMUST00000024627 Pkd1l1Q8R526 2615 aa8.68□□□□□ -1.02
Chd1-202ENSMUST00000024627 Fam104aA2A6P4 185 aa8.67□□□□□ -1.02
Chd1-202ENSMUST00000024627 Zcchc13Q9D548 170 aa8.66□□□□□ -1.02
Chd1-202ENSMUST00000024627 Fam229aB2KGE5 128 aa8.65□□□□□ -1.02
Chd1-202ENSMUST00000024627 Chd9Q8BYH8 2885 aa8.65□□□□□ -1.03
Chd1-202ENSMUST00000024627 Tex15F8VPN2 2785 aa8.64□□□□□ -1.03
Chd1-202ENSMUST00000024627 Igfn1Q3KNY0 2849 aa8.63□□□□□ -1.03
Chd1-202ENSMUST00000024627 NbeaQ9EPN1 2936 aa8.62□□□□□ -1.03
Chd1-202ENSMUST00000024627 NbdyA0A0N4SUI7 68 aa8.61□□□□□ -1.03
Chd1-202ENSMUST00000024627 Vps13cQ8BX70 3748 aa8.61□□□□□ -1.03
Chd1-202ENSMUST00000024627 Cypt14J3QPF7 87 aa8.6□□□□□ -1.03
Chd1-202ENSMUST00000024627 Csmd1Q923L3 3564 aa8.57□□□□□ -1.04
Chd1-202ENSMUST00000024627 LrbaQ9ESE1 2856 aa8.56□□□□□ -1.04
Chd1-202ENSMUST00000024627 Lelp1Q9DAE3 120 aa8.56□□□□□ -1.04
Chd1-202ENSMUST00000024627 Gm10643Q3URG9 111 aa8.55□□□□□ -1.04
Chd1-202ENSMUST00000024627 Gm17349F7BGH6 99 aa8.55□□□□□ -1.04
Chd1-202ENSMUST00000024627 Muc2Q80Z19 2680 aa8.54□□□□□ -1.04
Chd1-202ENSMUST00000024627 Gm36176A0A1W2P8D5 158 aa8.54□□□□□ -1.04
Chd1-202ENSMUST00000024627 Gm10065F6TJM2 114 aa8.49□□□□□ -1.05
Chd1-202ENSMUST00000024627 Smg1Q8BKX6 3658 aaKnown RBP8.48□□□□□ -1.05
Chd1-202ENSMUST00000024627 RelnQ60841 3461 aa8.47□□□□□ -1.05
Chd1-202ENSMUST00000024627 Zfhx4Q9JJN2 3550 aa8.46□□□□□ -1.05
Chd1-202ENSMUST00000024627 Cmya5Q70KF4 3739 aa8.46□□□□□ -1.05
Chd1-202ENSMUST00000024627 Sec61bQ9CQS8 96 aaKnown RBP8.43□□□□□ -1.06
Chd1-202ENSMUST00000024627 Gm10320E9PW43 113 aa8.42□□□□□ -1.06
Chd1-202ENSMUST00000024627 SpenQ62504 3644 aaKnown RBP8.41□□□□□ -1.06
Chd1-202ENSMUST00000024627 Srrm2Q8BTI8 2703 aaKnown RBP8.4□□□□□ -1.06
Chd1-202ENSMUST00000024627 FlncQ8VHX6 2726 aaKnown RBP8.39□□□□□ -1.07
Chd1-202ENSMUST00000024627 Celsr2Q9R0M0 2920 aa8.38□□□□□ -1.07
Chd1-202ENSMUST00000024627 Odf3bQ5M8M2 238 aa8.38□□□□□ -1.07
Chd1-202ENSMUST00000024627 Gm19426M0QWC7 77 aa8.37□□□□□ -1.07
Chd1-202ENSMUST00000024627 Nf1Q04690 2841 aa8.34□□□□□ -1.07
Chd1-202ENSMUST00000024627 Gm37013Q8K491 104 aa8.3□□□□□ -1.08
Chd1-202ENSMUST00000024627 Gm9507D3Z5T3 223 aa8.3□□□□□ -1.08
Chd1-202ENSMUST00000024627 Gm5767A0A0J9YTU8 78 aa8.27□□□□□ -1.09
Retrieved 100 of 22,080 RNA–protein pairs in 78.6 ms