RNA–Protein interactions for RNA: ENSMUST00000011895.13

Sptbn4-201, Transcript of Spectrin beta chain, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Sptbn4, Length 8,747 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sptbn4-201ENSMUST00000011895 Plac8Q9JI48 112 aa11.51□□□□□ -0.57
Sptbn4-201ENSMUST00000011895 Stab2Q8R4U0 2559 aa11.51□□□□□ -0.57
Sptbn4-201ENSMUST00000011895 Gm4491E0CX42 125 aa11.49□□□□□ -0.57
Sptbn4-201ENSMUST00000011895 Tnrc18Q80WC3 2878 aa11.49□□□□□ -0.57
Sptbn4-201ENSMUST00000011895 Anapc11Q9CPX9 84 aa11.47□□□□□ -0.57
Sptbn4-201ENSMUST00000011895 Odf3bQ5M8M2 238 aa11.47□□□□□ -0.57
Sptbn4-201ENSMUST00000011895 Smim29Q8R043 75 aa11.46□□□□□ -0.58
Sptbn4-201ENSMUST00000011895 Utp20Q5XG71 2788 aaKnown RBP11.42□□□□□ -0.58
Sptbn4-201ENSMUST00000011895 Itpr2Q9Z329 2701 aa11.41□□□□□ -0.58
Sptbn4-201ENSMUST00000011895 Pkd1l1Q8R526 2615 aa11.4□□□□□ -0.58
Sptbn4-201ENSMUST00000011895 Cep350E9Q309 3095 aa11.4□□□□□ -0.59
Sptbn4-201ENSMUST00000011895 Prune2Q52KR3 3084 aa11.39□□□□□ -0.59
Sptbn4-201ENSMUST00000011895 ApcQ61315 2845 aa11.38□□□□□ -0.59
Sptbn4-201ENSMUST00000011895 Fam229aB2KGE5 128 aa11.37□□□□□ -0.59
Sptbn4-201ENSMUST00000011895 Gm3646F6S692 53 aa11.34□□□□□ -0.59
Sptbn4-201ENSMUST00000011895 Romo1P60603 79 aa11.33□□□□□ -0.6
Sptbn4-201ENSMUST00000011895 Gm37013Q8K491 104 aa11.31□□□□□ -0.6
Sptbn4-201ENSMUST00000011895 Nbeal2Q6ZQA0 2742 aa11.29□□□□□ -0.6
Sptbn4-201ENSMUST00000011895 Gm10139O88245 57 aa11.27□□□□□ -0.61
Sptbn4-201ENSMUST00000011895 Rpl37Q9D823 97 aa11.26□□□□□ -0.61
Sptbn4-201ENSMUST00000011895 1700042G07RikB1AUF7 90 aa11.24□□□□□ -0.61
Sptbn4-201ENSMUST00000011895 Tex15F8VPN2 2785 aa11.23□□□□□ -0.61
Sptbn4-201ENSMUST00000011895 Gm11565A2A4M7 156 aa11.22□□□□□ -0.61
Sptbn4-201ENSMUST00000011895 Ubr5Q80TP3 2792 aa11.22□□□□□ -0.61
Sptbn4-201ENSMUST00000011895 Ash1lQ99MY8 2958 aa11.19□□□□□ -0.62
Sptbn4-201ENSMUST00000011895 Gm16253D3Z167 63 aa11.18□□□□□ -0.62
Sptbn4-201ENSMUST00000011895 Sec61bQ9CQS8 96 aaKnown RBP11.18□□□□□ -0.62
Sptbn4-201ENSMUST00000011895 Gm10320E9PW43 113 aa11.11□□□□□ -0.63
Sptbn4-201ENSMUST00000011895 Sprr1aQ62266 144 aa11.1□□□□□ -0.63
Sptbn4-201ENSMUST00000011895 Lama2Q60675 3118 aaKnown RBP11.1□□□□□ -0.63
Sptbn4-201ENSMUST00000011895 Gm3250E9Q1M3 230 aa11.09□□□□□ -0.63
Sptbn4-201ENSMUST00000011895 Krtap15-1Q9QZU5 150 aa11.08□□□□□ -0.64
Sptbn4-201ENSMUST00000011895 Gm10382Q3V0T5 144 aa11.07□□□□□ -0.64
Sptbn4-201ENSMUST00000011895 BC029722A0A0N4SW31 51 aa11.07□□□□□ -0.64
Sptbn4-201ENSMUST00000011895 Dmxl1Q6PNC0 3013 aa11.06□□□□□ -0.64
Sptbn4-201ENSMUST00000011895 Muc2Q80Z19 2680 aa11.02□□□□□ -0.65
Sptbn4-201ENSMUST00000011895 MgaA2AWL7 3003 aaKnown RBP11.02□□□□□ -0.65
Sptbn4-201ENSMUST00000011895 Cox6b2Q80ZN9 88 aa11.02□□□□□ -0.65
Sptbn4-201ENSMUST00000011895 Cystm1Q8K353 104 aa11□□□□□ -0.65
Sptbn4-201ENSMUST00000011895 UtrnE9Q6R7 3430 aa10.99□□□□□ -0.65
Sptbn4-201ENSMUST00000011895 Bod1lE9Q6J5 3032 aa10.99□□□□□ -0.65
Sptbn4-201ENSMUST00000011895 A730071L15RikQ8C4X0 137 aa10.97□□□□□ -0.65
Sptbn4-201ENSMUST00000011895 Fbn2Q61555 2907 aa10.97□□□□□ -0.65
Sptbn4-201ENSMUST00000011895 4933415A04RikQ9D443 101 aa10.97□□□□□ -0.65
Sptbn4-201ENSMUST00000011895 Gm19426M0QWC7 77 aa10.95□□□□□ -0.66
Sptbn4-201ENSMUST00000011895 Gm5767A0A0J9YTU8 78 aa10.93□□□□□ -0.66
Sptbn4-201ENSMUST00000011895 Ranbp2Q9ERU9 3053 aaKnown RBP10.93□□□□□ -0.66
Sptbn4-201ENSMUST00000011895 Krtap29-1A2A5X4 342 aa10.92□□□□□ -0.66
Sptbn4-201ENSMUST00000011895 FrylF8VQ05 3007 aa10.9□□□□□ -0.66
Sptbn4-201ENSMUST00000011895 Srrm2Q8BTI8 2703 aaKnown RBP10.9□□□□□ -0.66
Sptbn4-201ENSMUST00000011895 Ndufaf8A2AMZ4 74 aa10.87□□□□□ -0.67
Sptbn4-201ENSMUST00000011895 DspE9Q557 2883 aaKnown RBP10.86□□□□□ -0.67
Sptbn4-201ENSMUST00000011895 Chd7A2AJK6 2986 aaKnown RBP10.86□□□□□ -0.67
Sptbn4-201ENSMUST00000011895 Zzef1Q5SSH7 2924 aa10.85□□□□□ -0.67
Sptbn4-201ENSMUST00000011895 KalrnA2CG49 2964 aa10.84□□□□□ -0.67
Sptbn4-201ENSMUST00000011895 Rps29P62274 56 aa10.84□□□□□ -0.67
Sptbn4-201ENSMUST00000011895 Hivep1Q03172 2688 aa10.8□□□□□ -0.68
Sptbn4-201ENSMUST00000011895 BptfA2A654 3036 aaKnown RBP10.71□□□□□ -0.69
Sptbn4-201ENSMUST00000011895 TgO08710 2766 aa10.7□□□□□ -0.7
Sptbn4-201ENSMUST00000011895 Gm9112A2AI92 75 aa10.7□□□□□ -0.7
Sptbn4-201ENSMUST00000011895 Vps13aQ5H8C4 3166 aa10.69□□□□□ -0.7
Sptbn4-201ENSMUST00000011895 FcgbpE9Q0B5 2583 aa10.69□□□□□ -0.7
Sptbn4-201ENSMUST00000011895 TrioQ0KL02 3102 aa10.67□□□□□ -0.7
Sptbn4-201ENSMUST00000011895 Usp34Q6ZQ93 3582 aa10.67□□□□□ -0.7
Sptbn4-201ENSMUST00000011895 Igfn1Q3KNY0 2849 aa10.66□□□□□ -0.7
Sptbn4-201ENSMUST00000011895 2310050C09RikG5E8Z3 280 aa10.66□□□□□ -0.7
Sptbn4-201ENSMUST00000011895 Gm2310J3QNJ2 377 aa10.63□□□□□ -0.71
Sptbn4-201ENSMUST00000011895 Gm40193A0A1B0GT39 78 aa10.62□□□□□ -0.71
Sptbn4-201ENSMUST00000011895 Myo15bI7HPW8 3033 aa10.62□□□□□ -0.71
Sptbn4-201ENSMUST00000011895 FryE9Q8I9 3020 aa10.61□□□□□ -0.71
Sptbn4-201ENSMUST00000011895 Gm7173A0A0G2JEB6 3132 aa10.6□□□□□ -0.71
Sptbn4-201ENSMUST00000011895 Rev3lQ61493 3122 aa10.57□□□□□ -0.72
Sptbn4-201ENSMUST00000011895 Pdzd2E9Q1M1 2796 aa10.56□□□□□ -0.72
Sptbn4-201ENSMUST00000011895 SmcpP15265 143 aa10.56□□□□□ -0.72
Sptbn4-201ENSMUST00000011895 Cfap54Q8C6S9 3106 aa10.55□□□□□ -0.72
Sptbn4-201ENSMUST00000011895 Gm3233E9Q2H5 230 aa10.52□□□□□ -0.72
Sptbn4-201ENSMUST00000011895 FlncQ8VHX6 2726 aaKnown RBP10.52□□□□□ -0.73
Sptbn4-201ENSMUST00000011895 Mki67E9PVX6 3177 aaKnown RBP10.51□□□□□ -0.73
Sptbn4-201ENSMUST00000011895 Lama3Q61789 3330 aa10.5□□□□□ -0.73
Sptbn4-201ENSMUST00000011895 Tenm1Q9WTS4 2731 aa10.49□□□□□ -0.73
Sptbn4-201ENSMUST00000011895 Gm17349F7BGH6 99 aa10.47□□□□□ -0.73
Sptbn4-201ENSMUST00000011895 AtmQ62388 3066 aa10.47□□□□□ -0.73
Sptbn4-201ENSMUST00000011895 Wdfy4E9Q2M9 3149 aa10.46□□□□□ -0.73
Sptbn4-201ENSMUST00000011895 Nf1Q04690 2841 aa10.44□□□□□ -0.74
Sptbn4-201ENSMUST00000011895 Chd9Q8BYH8 2885 aa10.44□□□□□ -0.74
Sptbn4-201ENSMUST00000011895 Tnp1P10856 55 aa10.43□□□□□ -0.74
Sptbn4-201ENSMUST00000011895 Gm7138L7N2C3 230 aa10.39□□□□□ -0.75
Sptbn4-201ENSMUST00000011895 Gm3238W4VSP7 230 aa10.39□□□□□ -0.75
Sptbn4-201ENSMUST00000011895 Lelp1Q9DAE3 120 aa10.34□□□□□ -0.75
Sptbn4-201ENSMUST00000011895 Col12a1Q60847 3120 aa10.34□□□□□ -0.75
Sptbn4-201ENSMUST00000011895 Gm21887J3QQ04 176 aa10.31□□□□□ -0.76
Sptbn4-201ENSMUST00000011895 NbeaQ9EPN1 2936 aa10.3□□□□□ -0.76
Sptbn4-201ENSMUST00000011895 Unc80Q8BLN6 3261 aa10.3□□□□□ -0.76
Sptbn4-201ENSMUST00000011895 Krtap13O88375 197 aa10.28□□□□□ -0.76
Sptbn4-201ENSMUST00000011895 Krtap14O08640 167 aa10.28□□□□□ -0.76
Sptbn4-201ENSMUST00000011895 D6Ertd527eA0A0N4SWI3 464 aa10.25□□□□□ -0.77
Sptbn4-201ENSMUST00000011895 Tnp2P11378 117 aa10.24□□□□□ -0.77
Sptbn4-201ENSMUST00000011895 LrbaQ9ESE1 2856 aa10.24□□□□□ -0.77
Sptbn4-201ENSMUST00000011895 Celsr2Q9R0M0 2920 aa10.23□□□□□ -0.77
Sptbn4-201ENSMUST00000011895 Trank1Q8BV79 2999 aa10.23□□□□□ -0.77
Retrieved 100 of 22,080 RNA–protein pairs in 65.6 ms