RNA–Protein interactions for RNA: ENSMUST00000004097.15

Cux1-201, Transcript of Homeobox protein cut-like 1, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Cux1, Length 12,862 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cux1-201ENSMUST00000004097 Crip3Q6Q6R3 243 aa5.25□□□□□ -1.57
Cux1-201ENSMUST00000004097 Vps13aQ5H8C4 3166 aa5.25□□□□□ -1.57
Cux1-201ENSMUST00000004097 Sprr1bQ62267 153 aa5.25□□□□□ -1.57
Cux1-201ENSMUST00000004097 Gm36176A0A1W2P8D5 158 aa5.25□□□□□ -1.57
Cux1-201ENSMUST00000004097 FlnaQ8BTM8 2647 aaKnown RBP5.24□□□□□ -1.57
Cux1-201ENSMUST00000004097 B430305J03RikQ8BQQ8 176 aa5.24□□□□□ -1.57
Cux1-201ENSMUST00000004097 C530025M09RikF6RGA8 229 aa5.24□□□□□ -1.57
Cux1-201ENSMUST00000004097 Ash1lQ99MY8 2958 aa5.23□□□□□ -1.57
Cux1-201ENSMUST00000004097 Stab2Q8R4U0 2559 aa5.22□□□□□ -1.57
Cux1-201ENSMUST00000004097 Gm9955Q8CEJ8 102 aa5.22□□□□□ -1.57
Cux1-201ENSMUST00000004097 Ranbp2Q9ERU9 3053 aaKnown RBP5.21□□□□□ -1.58
Cux1-201ENSMUST00000004097 Col6a5A6H584 2640 aa5.19□□□□□ -1.58
Cux1-201ENSMUST00000004097 Gm7276Q3TYW4 209 aa5.19□□□□□ -1.58
Cux1-201ENSMUST00000004097 Pkd1l1Q8R526 2615 aa5.19□□□□□ -1.58
Cux1-201ENSMUST00000004097 Itpr1P11881 2749 aa5.19□□□□□ -1.58
Cux1-201ENSMUST00000004097 Igsf10Q3V1M1 2594 aa5.19□□□□□ -1.58
Cux1-201ENSMUST00000004097 Gm11213A0A1B0GR83 88 aa5.18□□□□□ -1.58
Cux1-201ENSMUST00000004097 6030445D17RikE9Q8F9 148 aa5.17□□□□□ -1.58
Cux1-201ENSMUST00000004097 Frem2Q6NVD0 3160 aa5.17□□□□□ -1.58
Cux1-201ENSMUST00000004097 Celsr3Q91ZI0 3301 aa5.17□□□□□ -1.58
Cux1-201ENSMUST00000004097 HttP42859 3119 aa5.17□□□□□ -1.58
Cux1-201ENSMUST00000004097 AY074887Q8R5F9 132 aa5.17□□□□□ -1.58
Cux1-201ENSMUST00000004097 NbdyA0A0N4SUI7 68 aa5.17□□□□□ -1.58
Cux1-201ENSMUST00000004097 Utp20Q5XG71 2788 aaKnown RBP5.16□□□□□ -1.58
Cux1-201ENSMUST00000004097 Brca2P97929 3329 aa5.15□□□□□ -1.58
Cux1-201ENSMUST00000004097 CnbpP53996 178 aaKnown RBP5.14□□□□□ -1.59
Cux1-201ENSMUST00000004097 Gm9507D3Z5T3 223 aa5.14□□□□□ -1.59
Cux1-201ENSMUST00000004097 Tnrc18Q80WC3 2878 aa5.14□□□□□ -1.59
Cux1-201ENSMUST00000004097 Wdfy3Q6VNB8 3508 aa5.13□□□□□ -1.59
Cux1-201ENSMUST00000004097 Cypt14J3QPF7 87 aa5.13□□□□□ -1.59
Cux1-201ENSMUST00000004097 Smim29Q8R043 75 aa5.13□□□□□ -1.59
Cux1-201ENSMUST00000004097 Zcchc13Q9D548 170 aa5.12□□□□□ -1.59
Cux1-201ENSMUST00000004097 Itpr2Q9Z329 2701 aa5.12□□□□□ -1.59
Cux1-201ENSMUST00000004097 Gm5767A0A0J9YTU8 78 aa5.12□□□□□ -1.59
Cux1-201ENSMUST00000004097 Krtap10-4Q08EG8 221 aa5.11□□□□□ -1.59
Cux1-201ENSMUST00000004097 Col12a1Q60847 3120 aa5.11□□□□□ -1.59
Cux1-201ENSMUST00000004097 Gm7173A0A0G2JEB6 3132 aa5.11□□□□□ -1.59
Cux1-201ENSMUST00000004097 Gm10308Q9CVR5 141 aa5.09□□□□□ -1.59
Cux1-201ENSMUST00000004097 Krtap16-1A2A5X5 502 aa5.08□□□□□ -1.6
Cux1-201ENSMUST00000004097 Myo15aQ9QZZ4 3511 aa5.07□□□□□ -1.6
Cux1-201ENSMUST00000004097 Gm9195A0A140LHT4 2805 aa5.07□□□□□ -1.6
Cux1-201ENSMUST00000004097 Nbeal2Q6ZQA0 2742 aa5.07□□□□□ -1.6
Cux1-201ENSMUST00000004097 Col6a3E9PWQ3 3284 aa5.07□□□□□ -1.6
Cux1-201ENSMUST00000004097 BptfA2A654 3036 aaKnown RBP5.07□□□□□ -1.6
Cux1-201ENSMUST00000004097 NipblQ6KCD5 2798 aaKnown RBP5.06□□□□□ -1.6
Cux1-201ENSMUST00000004097 Tnp2P11378 117 aa5.06□□□□□ -1.6
Cux1-201ENSMUST00000004097 Zfhx3Q61329 3726 aa5.06□□□□□ -1.6
Cux1-201ENSMUST00000004097 Krtap13O88375 197 aa5.06□□□□□ -1.6
Cux1-201ENSMUST00000004097 Gm10065F6TJM2 114 aa5.05□□□□□ -1.6
Cux1-201ENSMUST00000004097 Phxr4P15974 95 aa5.05□□□□□ -1.6
Cux1-201ENSMUST00000004097 Rev3lQ61493 3122 aa5.05□□□□□ -1.6
Cux1-201ENSMUST00000004097 Smr3aQ61900 147 aa5.05□□□□□ -1.6
Cux1-201ENSMUST00000004097 Krtap10-10A0A1W2P7T6 217 aa5.04□□□□□ -1.6
Cux1-201ENSMUST00000004097 BC029722A0A0N4SW31 51 aa5.03□□□□□ -1.6
Cux1-201ENSMUST00000004097 Eif4ebp3Q80VV3 101 aa5.02□□□□□ -1.61
Cux1-201ENSMUST00000004097 AtmQ62388 3066 aa5.02□□□□□ -1.61
Cux1-201ENSMUST00000004097 FlncQ8VHX6 2726 aaKnown RBP5.02□□□□□ -1.61
Cux1-201ENSMUST00000004097 Ubr5Q80TP3 2792 aa5.02□□□□□ -1.61
Cux1-201ENSMUST00000004097 KalrnA2CG49 2964 aa5.01□□□□□ -1.61
Cux1-201ENSMUST00000004097 VcanQ62059 3357 aa5.01□□□□□ -1.61
Cux1-201ENSMUST00000004097 DspE9Q557 2883 aaKnown RBP5.01□□□□□ -1.61
Cux1-201ENSMUST00000004097 FrylF8VQ05 3007 aa5.01□□□□□ -1.61
Cux1-201ENSMUST00000004097 Lelp1Q9DAE3 120 aa5.01□□□□□ -1.61
Cux1-201ENSMUST00000004097 2310057N15RikQ9D6T8 200 aa5□□□□□ -1.61
Cux1-201ENSMUST00000004097 FryE9Q8I9 3020 aa5□□□□□ -1.61
Cux1-201ENSMUST00000004097 Tex15F8VPN2 2785 aa4.98□□□□□ -1.61
Cux1-201ENSMUST00000004097 Gm10382Q3V0T5 144 aa4.97□□□□□ -1.61
Cux1-201ENSMUST00000004097 Lama1P19137 3084 aa4.97□□□□□ -1.61
Cux1-201ENSMUST00000004097 Odf3bQ5M8M2 238 aa4.96□□□□□ -1.62
Cux1-201ENSMUST00000004097 Lrrc37aB1AWG4 3215 aa4.96□□□□□ -1.62
Cux1-201ENSMUST00000004097 Krtap29-1A2A5X4 342 aa4.95□□□□□ -1.62
Cux1-201ENSMUST00000004097 Dchs1E9PVD3 3291 aa4.95□□□□□ -1.62
Cux1-201ENSMUST00000004097 MgaA2AWL7 3003 aaKnown RBP4.94□□□□□ -1.62
Cux1-201ENSMUST00000004097 Chd7A2AJK6 2986 aaKnown RBP4.93□□□□□ -1.62
Cux1-201ENSMUST00000004097 DmdP11531 3678 aa4.93□□□□□ -1.62
Cux1-201ENSMUST00000004097 FcgbpE9Q0B5 2583 aa4.93□□□□□ -1.62
Cux1-201ENSMUST00000004097 Dchs2A0A0A6YW72 3346 aa4.92□□□□□ -1.62
Cux1-201ENSMUST00000004097 Fam229bQ8CF36 80 aa4.92□□□□□ -1.62
Cux1-201ENSMUST00000004097 Dmxl2Q8BPN8 3032 aa4.92□□□□□ -1.62
Cux1-201ENSMUST00000004097 2310050C09RikG5E8Z3 280 aa4.9□□□□□ -1.63
Cux1-201ENSMUST00000004097 Wdfy4E9Q2M9 3149 aa4.9□□□□□ -1.63
Cux1-201ENSMUST00000004097 Gm2696A0A1W2P709 240 aa4.89□□□□□ -1.63
Cux1-201ENSMUST00000004097 SpegQ62407 3262 aa4.88□□□□□ -1.63
Cux1-201ENSMUST00000004097 ApcQ61315 2845 aa4.88□□□□□ -1.63
Cux1-201ENSMUST00000004097 Rpl37Q9D823 97 aa4.87□□□□□ -1.63
Cux1-201ENSMUST00000004097 Gm10643Q3URG9 111 aa4.86□□□□□ -1.63
Cux1-201ENSMUST00000004097 AspmQ8CJ27 3122 aa4.85□□□□□ -1.63
Cux1-201ENSMUST00000004097 Romo1P60603 79 aa4.85□□□□□ -1.63
Cux1-201ENSMUST00000004097 Celsr1O35161 3034 aa4.84□□□□□ -1.64
Cux1-201ENSMUST00000004097 Dmxl1Q6PNC0 3013 aa4.84□□□□□ -1.64
Cux1-201ENSMUST00000004097 LrbaQ9ESE1 2856 aa4.82□□□□□ -1.64
Cux1-201ENSMUST00000004097 Gm37013Q8K491 104 aa4.82□□□□□ -1.64
Cux1-201ENSMUST00000004097 Prr13Q9CQJ5 137 aa4.8□□□□□ -1.64
Cux1-201ENSMUST00000004097 Trank1Q8BV79 2999 aa4.8□□□□□ -1.64
Cux1-201ENSMUST00000004097 Muc2Q80Z19 2680 aa4.8□□□□□ -1.64
Cux1-201ENSMUST00000004097 Hivep1Q03172 2688 aa4.79□□□□□ -1.64
Cux1-201ENSMUST00000004097 Gm10139O88245 57 aa4.79□□□□□ -1.64
Cux1-201ENSMUST00000004097 Gm9918Q8BUR5 174 aa4.79□□□□□ -1.64
Cux1-201ENSMUST00000004097 Zzef1Q5SSH7 2924 aa4.79□□□□□ -1.64
Cux1-201ENSMUST00000004097 SpenQ62504 3644 aaKnown RBP4.79□□□□□ -1.64
Retrieved 100 of 22,080 RNA–protein pairs in 171.4 ms