RNA–Protein interactions for RNA: ENSMUST00000180353.1

Sox1-201, Transcript of Transcription factor SOX-1, mousemouse

APPRIS P1 BASIC

Gene Sox1, Length 4,832 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1-201ENSMUST00000180353 HttP42859 3119 aa14.52□□□□□ -0.08
Sox1-201ENSMUST00000180353 Igkv3-12A0A140T8P0 119 aa14.52□□□□□ -0.09
Sox1-201ENSMUST00000180353 Gm7173A0A0G2JEB6 3132 aa14.51□□□□□ -0.09
Sox1-201ENSMUST00000180353 Ccdc179J3QM76 67 aa14.51□□□□□ -0.09
Sox1-201ENSMUST00000180353 Prrc2cQ3TLH4 2846 aaKnown RBP14.51□□□□□ -0.09
Sox1-201ENSMUST00000180353 Chd7A2AJK6 2986 aaKnown RBP14.51□□□□□ -0.09
Sox1-201ENSMUST00000180353 A330070K13RikQ8CA53 115 aa14.51□□□□□ -0.09
Sox1-201ENSMUST00000180353 PtprqP0C5E4 2300 aa14.51□□□□□ -0.09
Sox1-201ENSMUST00000180353 Epg5Q80TA9 2572 aa14.5□□□□□ -0.09
Sox1-201ENSMUST00000180353 Gm4707V9GXN5 68 aa14.5□□□□□ -0.09
Sox1-201ENSMUST00000180353 Srsf12Q8C8K3 266 aa14.5□□□□□ -0.09
Sox1-201ENSMUST00000180353 Znf706Q9D115 76 aaKnown RBP14.49□□□□□ -0.09
Sox1-201ENSMUST00000180353 Col12a1Q60847 3120 aa14.48□□□□□ -0.09
Sox1-201ENSMUST00000180353 Dmac1Q9CQ00 111 aa14.47□□□□□ -0.09
Sox1-201ENSMUST00000180353 E130208F15RikQ3UPV3 143 aa14.45□□□□□ -0.1
Sox1-201ENSMUST00000180353 AY074887Q8R5F9 132 aa14.43□□□□□ -0.1
Sox1-201ENSMUST00000180353 Cep192E9Q4Y4 2514 aaKnown RBP14.41□□□□□ -0.1
Sox1-201ENSMUST00000180353 PscaP57096 123 aa14.4□□□□□ -0.1
Sox1-201ENSMUST00000180353 Rpl37aP61514 92 aa14.39□□□□□ -0.11
Sox1-201ENSMUST00000180353 Sprr1bQ62267 153 aa14.38□□□□□ -0.11
Sox1-201ENSMUST00000180353 Gm16485Q8C4B7 115 aa14.37□□□□□ -0.11
Sox1-201ENSMUST00000180353 Unc79Q0KK59 2596 aa14.35□□□□□ -0.11
Sox1-201ENSMUST00000180353 Gm11627A6PWP4 55 aa14.35□□□□□ -0.11
Sox1-201ENSMUST00000180353 Wfdc6bF6ULY1 148 aa14.34□□□□□ -0.11
Sox1-201ENSMUST00000180353 Uqcr11Q9CPX8 56 aa14.32□□□□□ -0.12
Sox1-201ENSMUST00000180353 Ranbp2Q9ERU9 3053 aaKnown RBP14.3□□□□□ -0.12
Sox1-201ENSMUST00000180353 Cdh23Q99PF4 3354 aa14.3□□□□□ -0.12
Sox1-201ENSMUST00000180353 C530025M09RikF6RGA8 229 aa14.3□□□□□ -0.12
Sox1-201ENSMUST00000180353 Map1aQ9QYR6 2776 aa14.29□□□□□ -0.12
Sox1-201ENSMUST00000180353 Bod1lE9Q6J5 3032 aa14.27□□□□□ -0.12
Sox1-201ENSMUST00000180353 Usp9yF8VPU6 2556 aa14.26□□□□□ -0.13
Sox1-201ENSMUST00000180353 Chtf8P0CG14 533 aa14.26□□□□□ -0.13
Sox1-201ENSMUST00000180353 Igkv3-7A0A0G2JE31 119 aa14.26□□□□□ -0.13
Sox1-201ENSMUST00000180353 Gcn1E9PVA8 2671 aaKnown RBP14.25□□□□□ -0.13
Sox1-201ENSMUST00000180353 Gm7276Q3TYW4 209 aa14.24□□□□□ -0.13
Sox1-201ENSMUST00000180353 Wfdc3Q14AE4 130 aa14.23□□□□□ -0.13
Sox1-201ENSMUST00000180353 Nbeal1E9PYP2 2688 aa14.23□□□□□ -0.13
Sox1-201ENSMUST00000180353 U90926O08546 118 aa14.22□□□□□ -0.13
Sox1-201ENSMUST00000180353 Gm10837Q3UTT8 145 aa14.22□□□□□ -0.13
Sox1-201ENSMUST00000180353 Nupr2Q497P3 102 aa14.21□□□□□ -0.14
Sox1-201ENSMUST00000180353 Wfdc17Q5SSJ1 76 aa14.2□□□□□ -0.14
Sox1-201ENSMUST00000180353 Vps13aQ5H8C4 3166 aa14.18□□□□□ -0.14
Sox1-201ENSMUST00000180353 Prol1E9PYQ4 312 aa14.17□□□□□ -0.14
Sox1-201ENSMUST00000180353 Unc80Q8BLN6 3261 aa14.17□□□□□ -0.14
Sox1-201ENSMUST00000180353 Krtap11-1E9Q2E9 183 aa14.17□□□□□ -0.14
Sox1-201ENSMUST00000180353 Gm10999F6Q4M4 69 aa14.15□□□□□ -0.14
Sox1-201ENSMUST00000180353 Q8BGJ3 129 aa14.15□□□□□ -0.14
Sox1-201ENSMUST00000180353 Rev3lQ61493 3122 aa14.14□□□□□ -0.15
Sox1-201ENSMUST00000180353 Gm26620Q9CY65 116 aa14.12□□□□□ -0.15
Sox1-201ENSMUST00000180353 Sprr4Q8CGN8 76 aa14.12□□□□□ -0.15
Sox1-201ENSMUST00000180353 Gm10320E9PW43 113 aa14.11□□□□□ -0.15
Sox1-201ENSMUST00000180353 Gm12216A0A1W2P827 62 aa14.11□□□□□ -0.15
Sox1-201ENSMUST00000180353 FlnbQ80X90 2602 aaKnown RBP14.1□□□□□ -0.15
Sox1-201ENSMUST00000180353 Snhg11Q4G0K9 87 aa14.1□□□□□ -0.15
Sox1-201ENSMUST00000180353 Gm3250E9Q1M3 230 aa14.07□□□□□ -0.16
Sox1-201ENSMUST00000180353 Ankrd17Q99NH0 2603 aaKnown RBP14.06□□□□□ -0.16
Sox1-201ENSMUST00000180353 Krtap24-1G3X9A2 248 aa14.06□□□□□ -0.16
Sox1-201ENSMUST00000180353 Lypd5Q9D7Z7 256 aa14.05□□□□□ -0.16
Sox1-201ENSMUST00000180353 1700042G07RikB1AUF7 90 aa14.04□□□□□ -0.16
Sox1-201ENSMUST00000180353 Phxr5P08399 672 aa14.03□□□□□ -0.16
Sox1-201ENSMUST00000180353 Gm3646F6S692 53 aa14.02□□□□□ -0.16
Sox1-201ENSMUST00000180353 Fam168bQ80XQ8 194 aa14.01□□□□□ -0.17
Sox1-201ENSMUST00000180353 Ash1lQ99MY8 2958 aa14.01□□□□□ -0.17
Sox1-201ENSMUST00000180353 Adm2Q7TNK8 150 aa14.01□□□□□ -0.17
Sox1-201ENSMUST00000180353 4933415A04RikQ9D443 101 aa13.99□□□□□ -0.17
Sox1-201ENSMUST00000180353 Szt2A2A9C3 3431 aa13.97□□□□□ -0.17
Sox1-201ENSMUST00000180353 Gm16181B0V2H2 73 aa13.96□□□□□ -0.17
Sox1-201ENSMUST00000180353 Fbn2Q61555 2907 aa13.95□□□□□ -0.18
Sox1-201ENSMUST00000180353 AtmQ62388 3066 aa13.95□□□□□ -0.18
Sox1-201ENSMUST00000180353 Defb1P56386 69 aa13.95□□□□□ -0.18
Sox1-201ENSMUST00000180353 Defb39Q70KL3 74 aa13.94□□□□□ -0.18
Sox1-201ENSMUST00000180353 Dmxl1Q6PNC0 3013 aa13.94□□□□□ -0.18
Sox1-201ENSMUST00000180353 Cypt15B1AXS0 87 aa13.94□□□□□ -0.18
Sox1-201ENSMUST00000180353 Mp68P56379 58 aa13.94□□□□□ -0.18
Sox1-201ENSMUST00000180353 Gm10642Q3TWM1 71 aa13.93□□□□□ -0.18
Sox1-201ENSMUST00000180353 Smim29Q8R043 75 aa13.93□□□□□ -0.18
Sox1-201ENSMUST00000180353 4930507D05RikQ8C9C9 103 aa13.92□□□□□ -0.18
Sox1-201ENSMUST00000180353 A730071L15RikQ8C4X0 137 aa13.9□□□□□ -0.18
Sox1-201ENSMUST00000180353 Phf5aP83870 110 aaKnown RBP13.9□□□□□ -0.18
Sox1-201ENSMUST00000180353 Myo15bI7HPW8 3033 aa13.88□□□□□ -0.19
Sox1-201ENSMUST00000180353 Lelp1Q9DAE3 120 aa13.88□□□□□ -0.19
Sox1-201ENSMUST00000180353 Ankrd11E9Q4F7 2643 aa13.88□□□□□ -0.19
Sox1-201ENSMUST00000180353 AplnQ9R0R4 77 aa13.88□□□□□ -0.19
Sox1-201ENSMUST00000180353 Zcchc13Q9D548 170 aa13.86□□□□□ -0.19
Sox1-201ENSMUST00000180353 Itpr1P11881 2749 aa13.86□□□□□ -0.19
Sox1-201ENSMUST00000180353 FlnaQ8BTM8 2647 aaKnown RBP13.85□□□□□ -0.19
Sox1-201ENSMUST00000180353 Gm27235Q3UW50 83 aa13.81□□□□□ -0.2
Sox1-201ENSMUST00000180353 Gm9821Q8K076 103 aa13.81□□□□□ -0.2
Sox1-201ENSMUST00000180353 MgaA2AWL7 3003 aaKnown RBP13.81□□□□□ -0.2
Sox1-201ENSMUST00000180353 Gm9195A0A140LHT4 2805 aa13.8□□□□□ -0.2
Sox1-201ENSMUST00000180353 1600014C23RikQ9DAX4 101 aa13.79□□□□□ -0.2
Sox1-201ENSMUST00000180353 KalrnA2CG49 2964 aa13.75□□□□□ -0.21
Sox1-201ENSMUST00000180353 CicQ924A2 2510 aa13.75□□□□□ -0.21
Sox1-201ENSMUST00000180353 Frem2Q6NVD0 3160 aa13.73□□□□□ -0.21
Sox1-201ENSMUST00000180353 Gm17606F6ZL36 78 aa13.73□□□□□ -0.21
Sox1-201ENSMUST00000180353 Spata3Q9D9T6 193 aa13.72□□□□□ -0.21
Sox1-201ENSMUST00000180353 Lrrc37aB1AWG4 3215 aa13.72□□□□□ -0.21
Sox1-201ENSMUST00000180353 Celsr3Q91ZI0 3301 aa13.71□□□□□ -0.21
Sox1-201ENSMUST00000180353 AspmQ8CJ27 3122 aa13.7□□□□□ -0.22
Sox1-201ENSMUST00000180353 Notch1Q01705 2531 aa13.7□□□□□ -0.22
Retrieved 100 of 22,080 RNA–protein pairs in 72.5 ms