RNA–Protein interactions for RNA: ENSMUST00000161609.7

Rc3h1-202, Transcript of Roquin-1, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Rc3h1, Length 11,006 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1-202ENSMUST00000161609 Nav3Q80TN7 2359 aa5.17□□□□□ -1.58
Rc3h1-202ENSMUST00000161609 C530025M09RikF6RGA8 229 aa5.16□□□□□ -1.58
Rc3h1-202ENSMUST00000161609 Gm11627A6PWP4 55 aa5.15□□□□□ -1.58
Rc3h1-202ENSMUST00000161609 Gm4491E0CX42 125 aa5.15□□□□□ -1.58
Rc3h1-202ENSMUST00000161609 Col4a4Q9QZR9 1682 aa5.15□□□□□ -1.58
Rc3h1-202ENSMUST00000161609 B430305J03RikQ8BQQ8 176 aa5.15□□□□□ -1.59
Rc3h1-202ENSMUST00000161609 Pcsk5Q04592 1877 aa5.15□□□□□ -1.59
Rc3h1-202ENSMUST00000161609 Gm9918Q8BUR5 174 aa5.14□□□□□ -1.59
Rc3h1-202ENSMUST00000161609 Gm7276Q3TYW4 209 aa5.14□□□□□ -1.59
Rc3h1-202ENSMUST00000161609 Cypt15B1AXS0 87 aa5.13□□□□□ -1.59
Rc3h1-202ENSMUST00000161609 Psors1c2Q80ZC9 134 aa5.12□□□□□ -1.59
Rc3h1-202ENSMUST00000161609 Atp5eP56382 52 aa5.12□□□□□ -1.59
Rc3h1-202ENSMUST00000161609 Smim1P0C8K7 78 aa5.12□□□□□ -1.59
Rc3h1-202ENSMUST00000161609 Rps28P62858 69 aaKnown RBP5.11□□□□□ -1.59
Rc3h1-202ENSMUST00000161609 Cfap46E9Q2C0 2641 aa5.11□□□□□ -1.59
Rc3h1-202ENSMUST00000161609 Gm19426M0QWC7 77 aa5.1□□□□□ -1.59
Rc3h1-202ENSMUST00000161609 Golgb1E9PVZ8 3238 aa5.1□□□□□ -1.59
Rc3h1-202ENSMUST00000161609 Smim29Q8R043 75 aa5.1□□□□□ -1.59
Rc3h1-202ENSMUST00000161609 2310034C09RikQ9D746 214 aa5.09□□□□□ -1.59
Rc3h1-202ENSMUST00000161609 Gm10320E9PW43 113 aa5.08□□□□□ -1.6
Rc3h1-202ENSMUST00000161609 Gm2696A0A1W2P709 240 aa5.08□□□□□ -1.6
Rc3h1-202ENSMUST00000161609 Crip3Q6Q6R3 243 aa5.08□□□□□ -1.6
Rc3h1-202ENSMUST00000161609 Elof1P60003 83 aa5.08□□□□□ -1.6
Rc3h1-202ENSMUST00000161609 Krtap13O88375 197 aa5.07□□□□□ -1.6
Rc3h1-202ENSMUST00000161609 Tns1E9Q0S6 1888 aaKnown RBP5.05□□□□□ -1.6
Rc3h1-202ENSMUST00000161609 A530084C06RikQ3UTW2 186 aa5.04□□□□□ -1.6
Rc3h1-202ENSMUST00000161609 Nav2E9Q842 2432 aa5.03□□□□□ -1.6
Rc3h1-202ENSMUST00000161609 Krtap29-1A2A5X4 342 aa5.03□□□□□ -1.6
Rc3h1-202ENSMUST00000161609 Krtap27-1E9PX37 202 aa5.03□□□□□ -1.6
Rc3h1-202ENSMUST00000161609 Hcfc1Q61191 2045 aaKnown RBP5.03□□□□□ -1.6
Rc3h1-202ENSMUST00000161609 4933415A04RikQ9D443 101 aa5.02□□□□□ -1.61
Rc3h1-202ENSMUST00000161609 Gm10337F7DEP7 55 aa5.02□□□□□ -1.61
Rc3h1-202ENSMUST00000161609 Coa5Q99M07 74 aa5.01□□□□□ -1.61
Rc3h1-202ENSMUST00000161609 Tnp2P11378 117 aa5.01□□□□□ -1.61
Rc3h1-202ENSMUST00000161609 Sec61bQ9CQS8 96 aaKnown RBP5□□□□□ -1.61
Rc3h1-202ENSMUST00000161609 Gm21798J3QNU5 87 aa5□□□□□ -1.61
Rc3h1-202ENSMUST00000161609 Lelp1Q9DAE3 120 aa4.99□□□□□ -1.61
Rc3h1-202ENSMUST00000161609 Lama3Q61789 3330 aa4.99□□□□□ -1.61
Rc3h1-202ENSMUST00000161609 Rp1l1Q8CGM2 1859 aa4.99□□□□□ -1.61
Rc3h1-202ENSMUST00000161609 4930518I15RikQ3V2W7 57 aa4.99□□□□□ -1.61
Rc3h1-202ENSMUST00000161609 Igf2rQ07113 2483 aaKnown RBP4.98□□□□□ -1.61
Rc3h1-202ENSMUST00000161609 6030445D17RikE9Q8F9 148 aa4.98□□□□□ -1.61
Rc3h1-202ENSMUST00000161609 Gm10772F7AIG4 85 aa4.98□□□□□ -1.61
Rc3h1-202ENSMUST00000161609 Tln1P26039 2541 aaKnown RBP4.98□□□□□ -1.61
Rc3h1-202ENSMUST00000161609 Zfp462B1AWL2 2495 aaKnown RBP4.98□□□□□ -1.61
Rc3h1-202ENSMUST00000161609 Col4a2P08122 1707 aa4.97□□□□□ -1.61
Rc3h1-202ENSMUST00000161609 Lrrk2Q5S006 2527 aa4.97□□□□□ -1.61
Rc3h1-202ENSMUST00000161609 Gm10318A0A1W2P728 225 aa4.96□□□□□ -1.62
Rc3h1-202ENSMUST00000161609 Sprr4Q8CGN8 76 aa4.95□□□□□ -1.62
Rc3h1-202ENSMUST00000161609 Zfyve26Q5DU37 2529 aa4.94□□□□□ -1.62
Rc3h1-202ENSMUST00000161609 Sprr1bQ62267 153 aa4.94□□□□□ -1.62
Rc3h1-202ENSMUST00000161609 Ttc28Q80XJ3 2450 aa4.94□□□□□ -1.62
Rc3h1-202ENSMUST00000161609 Fam104aA2A6P4 185 aa4.94□□□□□ -1.62
Rc3h1-202ENSMUST00000161609 Gm9955Q8CEJ8 102 aa4.93□□□□□ -1.62
Rc3h1-202ENSMUST00000161609 Zcchc13Q9D548 170 aa4.93□□□□□ -1.62
Rc3h1-202ENSMUST00000161609 Gm19935A0A1B0GSF9 52 aa4.92□□□□□ -1.62
Rc3h1-202ENSMUST00000161609 AY074887Q8R5F9 132 aa4.91□□□□□ -1.62
Rc3h1-202ENSMUST00000161609 Uqcr11Q9CPX8 56 aa4.91□□□□□ -1.62
Rc3h1-202ENSMUST00000161609 Ankhd1E9PUR0 2548 aaKnown RBP4.88□□□□□ -1.63
Rc3h1-202ENSMUST00000161609 Cypt14J3QPF7 87 aa4.87□□□□□ -1.63
Rc3h1-202ENSMUST00000161609 CicQ924A2 2510 aa4.86□□□□□ -1.63
Rc3h1-202ENSMUST00000161609 NbdyA0A0N4SUI7 68 aa4.85□□□□□ -1.63
Rc3h1-202ENSMUST00000161609 Ep400Q8CHI8 3072 aaKnown RBP4.85□□□□□ -1.63
Rc3h1-202ENSMUST00000161609 Gm5965D3Z724 196 aa4.84□□□□□ -1.63
Rc3h1-202ENSMUST00000161609 Gm5767A0A0J9YTU8 78 aa4.83□□□□□ -1.64
Rc3h1-202ENSMUST00000161609 Ypel4Q65Z93 127 aa4.83□□□□□ -1.64
Rc3h1-202ENSMUST00000161609 Chd8Q09XV5 2582 aaKnown RBP4.83□□□□□ -1.64
Rc3h1-202ENSMUST00000161609 Bod1lE9Q6J5 3032 aa4.82□□□□□ -1.64
Rc3h1-202ENSMUST00000161609 Phxr4P15974 95 aa4.82□□□□□ -1.64
Rc3h1-202ENSMUST00000161609 Eif4ebp3Q80VV3 101 aa4.82□□□□□ -1.64
Rc3h1-202ENSMUST00000161609 Gm10382Q3V0T5 144 aa4.82□□□□□ -1.64
Rc3h1-202ENSMUST00000161609 3110070M22RikQ9DAQ7 118 aa4.82□□□□□ -1.64
Rc3h1-202ENSMUST00000161609 Gm9573F7C950 1606 aa4.8□□□□□ -1.64
Rc3h1-202ENSMUST00000161609 Fam229bQ8CF36 80 aa4.79□□□□□ -1.64
Rc3h1-202ENSMUST00000161609 Mki67E9PVX6 3177 aaKnown RBP4.79□□□□□ -1.64
Rc3h1-202ENSMUST00000161609 Ptpn13Q64512 2453 aa4.79□□□□□ -1.64
Rc3h1-202ENSMUST00000161609 Szt2A2A9C3 3431 aa4.78□□□□□ -1.64
Rc3h1-202ENSMUST00000161609 Piezo1E2JF22 2547 aa4.76□□□□□ -1.65
Rc3h1-202ENSMUST00000161609 Romo1P60603 79 aa4.76□□□□□ -1.65
Rc3h1-202ENSMUST00000161609 2310050C09RikG5E8Z3 280 aa4.75□□□□□ -1.65
Rc3h1-202ENSMUST00000161609 Odf3bQ5M8M2 238 aa4.75□□□□□ -1.65
Rc3h1-202ENSMUST00000161609 CnfnQ6PCW6 111 aa4.75□□□□□ -1.65
Rc3h1-202ENSMUST00000161609 BC029722A0A0N4SW31 51 aa4.74□□□□□ -1.65
Rc3h1-202ENSMUST00000161609 Sptbn4E9PX29 2561 aa4.71□□□□□ -1.66
Rc3h1-202ENSMUST00000161609 Nsd1O88491 2588 aaKnown RBP4.71□□□□□ -1.66
Rc3h1-202ENSMUST00000161609 Prune2Q52KR3 3084 aa4.71□□□□□ -1.66
Rc3h1-202ENSMUST00000161609 Dmbt1Q60997 2085 aa4.7□□□□□ -1.66
Rc3h1-202ENSMUST00000161609 TrrapQ80YV3 2565 aaKnown RBP4.7□□□□□ -1.66
Rc3h1-202ENSMUST00000161609 Gm10065F6TJM2 114 aa4.7□□□□□ -1.66
Rc3h1-202ENSMUST00000161609 Gm9112A2AI92 75 aa4.69□□□□□ -1.66
Rc3h1-202ENSMUST00000161609 CnbpP53996 178 aaKnown RBP4.69□□□□□ -1.66
Rc3h1-202ENSMUST00000161609 Col27a1Q5QNQ9 1845 aa4.69□□□□□ -1.66
Rc3h1-202ENSMUST00000161609 Gm42715A0A087WP63 3095 aaKnown RBP4.68□□□□□ -1.66
Rc3h1-202ENSMUST00000161609 Gm11213A0A1B0GR83 88 aa4.68□□□□□ -1.66
Rc3h1-202ENSMUST00000161609 Zfhx3Q61329 3726 aa4.68□□□□□ -1.66
Rc3h1-202ENSMUST00000161609 BptfA2A654 3036 aaKnown RBP4.65□□□□□ -1.67
Rc3h1-202ENSMUST00000161609 Usp34Q6ZQ93 3582 aa4.64□□□□□ -1.67
Rc3h1-202ENSMUST00000161609 Gm21887J3QQ04 176 aa4.63□□□□□ -1.67
Rc3h1-202ENSMUST00000161609 Gm10308Q9CVR5 141 aa4.62□□□□□ -1.67
Rc3h1-202ENSMUST00000161609 Crct1Q6PAI5 102 aa4.62□□□□□ -1.67
Retrieved 100 of 22,080 RNA–protein pairs in 108 ms