RNA–Protein interactions for RNA: ENSMUST00000115537.1

Col28a1-201, Transcript of Collagen alpha-1(XXVIII) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col28a1, Length 4,230 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col28a1-201ENSMUST00000115537 Wfdc15aQ8BH89 80 aa6.18□□□□□ -1.42
Col28a1-201ENSMUST00000115537 Fam229bQ8CF36 80 aa6.18□□□□□ -1.42
Col28a1-201ENSMUST00000115537 Ighv10-1A0A0B4J1J6 119 aa6.17□□□□□ -1.42
Col28a1-201ENSMUST00000115537 9530003J23RikQ8BM26 151 aa6.17□□□□□ -1.42
Col28a1-201ENSMUST00000115537 Gm11011D3Z3L9 86 aa6.17□□□□□ -1.42
Col28a1-201ENSMUST00000115537 U90926O08546 118 aa6.17□□□□□ -1.42
Col28a1-201ENSMUST00000115537 Zfand2aQ9JII7 171 aa6.17□□□□□ -1.42
Col28a1-201ENSMUST00000115537 Gm9805F6YK59 57 aa6.17□□□□□ -1.42
Col28a1-201ENSMUST00000115537 Reg3bP35230 175 aa6.17□□□□□ -1.42
Col28a1-201ENSMUST00000115537 CnbpP53996 178 aaKnown RBP6.17□□□□□ -1.42
Col28a1-201ENSMUST00000115537 Igkv1-88A0A140T8N1 120 aa6.17□□□□□ -1.42
Col28a1-201ENSMUST00000115537 Ighv2-9-1A0A075B697 116 aa6.16□□□□□ -1.42
Col28a1-201ENSMUST00000115537 Odf3l2Q3TZ65 277 aa6.16□□□□□ -1.42
Col28a1-201ENSMUST00000115537 Igkv8-27A0A0G2JF28 120 aa6.16□□□□□ -1.42
Col28a1-201ENSMUST00000115537 Igkv8-30A0A140T8M3 121 aa6.16□□□□□ -1.42
Col28a1-201ENSMUST00000115537 Atox1O08997 68 aaKnown RBP6.16□□□□□ -1.42
Col28a1-201ENSMUST00000115537 Defb11Q8R2I7 77 aa6.16□□□□□ -1.42
Col28a1-201ENSMUST00000115537 Gm9903Q8C9Y8 129 aa6.16□□□□□ -1.42
Col28a1-201ENSMUST00000115537 Gm10401E9Q3K6 71 aa6.15□□□□□ -1.42
Col28a1-201ENSMUST00000115537 Gm10197F6QEY5 67 aa6.15□□□□□ -1.42
Col28a1-201ENSMUST00000115537 Gm20604F8WIA3 75 aa6.15□□□□□ -1.43
Col28a1-201ENSMUST00000115537 2310034G01RikA0A286YDL3 209 aa6.14□□□□□ -1.43
Col28a1-201ENSMUST00000115537 Defb42Q8BVB5 75 aa6.14□□□□□ -1.43
Col28a1-201ENSMUST00000115537 Wfdc12Q9JHY3 85 aa6.14□□□□□ -1.43
Col28a1-201ENSMUST00000115537 Ly6g6cQ9Z1Q4 126 aa6.14□□□□□ -1.43
Col28a1-201ENSMUST00000115537 Ighv2-5A0A0A6YY69 116 aa6.13□□□□□ -1.43
Col28a1-201ENSMUST00000115537 Gm11565A2A4M7 156 aa6.13□□□□□ -1.43
Col28a1-201ENSMUST00000115537 Gm17689B3GLJ4 109 aa6.13□□□□□ -1.43
Col28a1-201ENSMUST00000115537 Tfpi2O35536 230 aa6.13□□□□□ -1.43
Col28a1-201ENSMUST00000115537 Gm7137J3QMW1 236 aa6.13□□□□□ -1.43
Col28a1-201ENSMUST00000115537 A830005F24RikQ8BRT5 167 aa6.13□□□□□ -1.43
Col28a1-201ENSMUST00000115537 Trav9n-4A0A075B631 113 aa6.12□□□□□ -1.43
Col28a1-201ENSMUST00000115537 D730001G18RikA0A087WQU7 115 aa6.12□□□□□ -1.43
Col28a1-201ENSMUST00000115537 Krtap26-1Q9D7N2 215 aa6.12□□□□□ -1.43
Col28a1-201ENSMUST00000115537 Helz2E9QAM5 2947 aaKnown RBP6.12□□□□□ -1.43
Col28a1-201ENSMUST00000115537 Vpreb3D3Z6J4 130 aa6.11□□□□□ -1.43
Col28a1-201ENSMUST00000115537 CrygaP04345 174 aa6.11□□□□□ -1.43
Col28a1-201ENSMUST00000115537 PscaP57096 123 aa6.1□□□□□ -1.43
Col28a1-201ENSMUST00000115537 Pla2g1bQ9Z0Y2 146 aa6.1□□□□□ -1.43
Col28a1-201ENSMUST00000115537 Tenm3Q9WTS6 2715 aa6.1□□□□□ -1.43
Col28a1-201ENSMUST00000115537 Wfdc17Q5SSJ1 76 aa6.1□□□□□ -1.43
Col28a1-201ENSMUST00000115537 E130208F15RikQ3UPV3 143 aa6.1□□□□□ -1.43
Col28a1-201ENSMUST00000115537 Ufsp1Q9CZP0 217 aa6.1□□□□□ -1.43
Col28a1-201ENSMUST00000115537 Igkv1-110A0A0B4J1I0 119 aa6.09□□□□□ -1.43
Col28a1-201ENSMUST00000115537 Coa6Q8BGD8 79 aa6.09□□□□□ -1.43
Col28a1-201ENSMUST00000115537 Cox7bP56393 80 aa6.09□□□□□ -1.44
Col28a1-201ENSMUST00000115537 Camk2n2Q78WH7 79 aa6.09□□□□□ -1.44
Col28a1-201ENSMUST00000115537 Vps13cQ8BX70 3748 aa6.08□□□□□ -1.44
Col28a1-201ENSMUST00000115537 Defb50Q6TU36 73 aa6.08□□□□□ -1.44
Col28a1-201ENSMUST00000115537 Ube2bP63147 152 aa6.08□□□□□ -1.44
Col28a1-201ENSMUST00000115537 Lama5Q61001 3718 aa6.08□□□□□ -1.44
Col28a1-201ENSMUST00000115537 Gm7138L7N2C3 230 aa6.07□□□□□ -1.44
Col28a1-201ENSMUST00000115537 MobpQ9D2P8 170 aa6.07□□□□□ -1.44
Col28a1-201ENSMUST00000115537 Gm3238W4VSP7 230 aa6.07□□□□□ -1.44
Col28a1-201ENSMUST00000115537 Cox7b2Q9D2H1 82 aa6.07□□□□□ -1.44
Col28a1-201ENSMUST00000115537 Ighv2-2A0A075B5P8 116 aa6.07□□□□□ -1.44
Col28a1-201ENSMUST00000115537 Gm17577J3QNF7 156 aa6.07□□□□□ -1.44
Col28a1-201ENSMUST00000115537 P01821 116 aa6.07□□□□□ -1.44
Col28a1-201ENSMUST00000115537 Ighv2-9A0A075B5Q5 116 aa6.06□□□□□ -1.44
Col28a1-201ENSMUST00000115537 Igkv4-92A0A0B4J1I2 117 aa6.06□□□□□ -1.44
Col28a1-201ENSMUST00000115537 Cdc42se1Q8BHL7 80 aa6.06□□□□□ -1.44
Col28a1-201ENSMUST00000115537 6430550D23RikE9Q1X6 194 aa6.05□□□□□ -1.44
Col28a1-201ENSMUST00000115537 AI606181Q8C7B9 129 aa6.05□□□□□ -1.44
Col28a1-201ENSMUST00000115537 Gm17521F6QAC8 156 aa6.05□□□□□ -1.44
Col28a1-201ENSMUST00000115537 Defb40Q70KL2 73 aa6.05□□□□□ -1.44
Col28a1-201ENSMUST00000115537 Chchd7Q8K2Q5 85 aa6.05□□□□□ -1.44
Col28a1-201ENSMUST00000115537 1700012A03RikQ9DAF1 130 aa6.04□□□□□ -1.44
Col28a1-201ENSMUST00000115537 A0A286YCN5 57 aa6.04□□□□□ -1.44
Col28a1-201ENSMUST00000115537 B9d2Q3UK10 175 aa6.04□□□□□ -1.44
Col28a1-201ENSMUST00000115537 Msrb1Q9JLC3 116 aa6.04□□□□□ -1.44
Col28a1-201ENSMUST00000115537 Pdzd2E9Q1M1 2796 aa6.03□□□□□ -1.44
Col28a1-201ENSMUST00000115537 Gm5617Q91VN2 117 aa6.03□□□□□ -1.44
Col28a1-201ENSMUST00000115537 SpenQ62504 3644 aaKnown RBP6.03□□□□□ -1.44
Col28a1-201ENSMUST00000115537 Ube2aQ9Z255 152 aa6.03□□□□□ -1.44
Col28a1-201ENSMUST00000115537 Srrm2Q8BTI8 2703 aaKnown RBP6.02□□□□□ -1.45
Col28a1-201ENSMUST00000115537 Sprr2jO70561 109 aa6.02□□□□□ -1.45
Col28a1-201ENSMUST00000115537 Defb37Q7TMD2 62 aa6.02□□□□□ -1.45
Col28a1-201ENSMUST00000115537 Smg1Q8BKX6 3658 aaKnown RBP6.01□□□□□ -1.45
Col28a1-201ENSMUST00000115537 Csmd1Q923L3 3564 aa6.01□□□□□ -1.45
Col28a1-201ENSMUST00000115537 Gm10772F7AIG4 85 aa6□□□□□ -1.45
Col28a1-201ENSMUST00000115537 Ndufb1P0DN34 57 aa6□□□□□ -1.45
Col28a1-201ENSMUST00000115537 A930002H24RikQ8C8Y3 163 aa6□□□□□ -1.45
Col28a1-201ENSMUST00000115537 OtogO55225 2910 aa6□□□□□ -1.45
Col28a1-201ENSMUST00000115537 Gm12353A2AGJ4 60 aa6□□□□□ -1.45
Col28a1-201ENSMUST00000115537 Tcl1b5P56845 121 aa6□□□□□ -1.45
Col28a1-201ENSMUST00000115537 Nupr2Q497P3 102 aa6□□□□□ -1.45
Col28a1-201ENSMUST00000115537 Defb38Q7TNV7 63 aa5.99□□□□□ -1.45
Col28a1-201ENSMUST00000115537 Igkv3-10A0A0G2JGN0 119 aa5.99□□□□□ -1.45
Col28a1-201ENSMUST00000115537 Gm36176A0A1W2P8D5 158 aa5.98□□□□□ -1.45
Col28a1-201ENSMUST00000115537 Q8BT88 171 aa5.98□□□□□ -1.45
Col28a1-201ENSMUST00000115537 Gpha2Q925Q5 128 aa5.98□□□□□ -1.45
Col28a1-201ENSMUST00000115537 Igkv8-28A0A0G2JE47 121 aa5.97□□□□□ -1.45
Col28a1-201ENSMUST00000115537 A0A286YE49 62 aa5.97□□□□□ -1.45
Col28a1-201ENSMUST00000115537 Gm10770F7D043 238 aa5.96□□□□□ -1.46
Col28a1-201ENSMUST00000115537 Gm10320E9PW43 113 aa5.96□□□□□ -1.46
Col28a1-201ENSMUST00000115537 Coa5Q99M07 74 aa5.96□□□□□ -1.46
Col28a1-201ENSMUST00000115537 1700074P13RikQ9D9G7 251 aa5.95□□□□□ -1.46
Col28a1-201ENSMUST00000115537 A330070K13RikQ8CA53 115 aa5.94□□□□□ -1.46
Col28a1-201ENSMUST00000115537 Gm43218A0A0G2JGT0 114 aa5.94□□□□□ -1.46
Col28a1-201ENSMUST00000115537 Gm10267M0QWD8 85 aa5.94□□□□□ -1.46
Retrieved 100 of 22,080 RNA–protein pairs in 45.1 ms