RNA–Protein interactions for RNA: ENSMUST00000113051.8

Shroom3-201, Transcript of Protein Shroom3, mousemouse

TSL 1 (best) BASIC

Gene Shroom3, Length 6,435 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom3-201ENSMUST00000113051 Spint4Q9D263 159 aa11.2□□□□□ -0.62
Shroom3-201ENSMUST00000113051 Cdip1Q9DB75 208 aa11.19□□□□□ -0.62
Shroom3-201ENSMUST00000113051 Rnase13Q5GAM7 153 aa11.18□□□□□ -0.62
Shroom3-201ENSMUST00000113051 Crip3Q6Q6R3 243 aa11.17□□□□□ -0.62
Shroom3-201ENSMUST00000113051 AI854703Q8BIN3 203 aa11.17□□□□□ -0.62
Shroom3-201ENSMUST00000113051 Ptpn13Q64512 2453 aa11.16□□□□□ -0.62
Shroom3-201ENSMUST00000113051 Mp68P56379 58 aa11.15□□□□□ -0.62
Shroom3-201ENSMUST00000113051 Limd2Q8BGB5 128 aa11.14□□□□□ -0.63
Shroom3-201ENSMUST00000113051 Usp9xP70398 2559 aaKnown RBP11.13□□□□□ -0.63
Shroom3-201ENSMUST00000113051 Defb9Q8R2I6 67 aa11.11□□□□□ -0.63
Shroom3-201ENSMUST00000113051 Pla2g10Q9QXX3 151 aa11.11□□□□□ -0.63
Shroom3-201ENSMUST00000113051 Hcfc1Q61191 2045 aaKnown RBP11.08□□□□□ -0.64
Shroom3-201ENSMUST00000113051 TrrapQ80YV3 2565 aaKnown RBP11.08□□□□□ -0.64
Shroom3-201ENSMUST00000113051 A530084C06RikQ3UTW2 186 aa11.06□□□□□ -0.64
Shroom3-201ENSMUST00000113051 OxtP35454 125 aa11.05□□□□□ -0.64
Shroom3-201ENSMUST00000113051 SetxA2AKX3 2646 aa11.01□□□□□ -0.65
Shroom3-201ENSMUST00000113051 Sprr4Q8CGN8 76 aa11.01□□□□□ -0.65
Shroom3-201ENSMUST00000113051 Smr3aQ61900 147 aa10.99□□□□□ -0.65
Shroom3-201ENSMUST00000113051 Coa5Q99M07 74 aa10.95□□□□□ -0.66
Shroom3-201ENSMUST00000113051 A330070K13RikQ8CA53 115 aa10.94□□□□□ -0.66
Shroom3-201ENSMUST00000113051 Bahcc1Q3UHR0 2643 aa10.94□□□□□ -0.66
Shroom3-201ENSMUST00000113051 Cdc42se1Q8BHL7 80 aa10.94□□□□□ -0.66
Shroom3-201ENSMUST00000113051 Golgb1E9PVZ8 3238 aa10.93□□□□□ -0.66
Shroom3-201ENSMUST00000113051 Sprr1bQ62267 153 aa10.92□□□□□ -0.66
Shroom3-201ENSMUST00000113051 Eif4ebp3Q80VV3 101 aa10.91□□□□□ -0.66
Shroom3-201ENSMUST00000113051 Setd2E9Q5F9 2537 aa10.91□□□□□ -0.66
Shroom3-201ENSMUST00000113051 Gm20538F6Z9R1 75 aa10.91□□□□□ -0.66
Shroom3-201ENSMUST00000113051 Lypd5Q9D7Z7 256 aa10.9□□□□□ -0.66
Shroom3-201ENSMUST00000113051 Cypt15B1AXS0 87 aa10.9□□□□□ -0.66
Shroom3-201ENSMUST00000113051 Krtap26-1Q9D7N2 215 aa10.9□□□□□ -0.67
Shroom3-201ENSMUST00000113051 C530025M09RikF6RGA8 229 aa10.89□□□□□ -0.67
Shroom3-201ENSMUST00000113051 PolqQ8CGS6 2544 aa10.88□□□□□ -0.67
Shroom3-201ENSMUST00000113051 MtorQ9JLN9 2549 aa10.87□□□□□ -0.67
Shroom3-201ENSMUST00000113051 AY074887Q8R5F9 132 aa10.87□□□□□ -0.67
Shroom3-201ENSMUST00000113051 Epg5Q80TA9 2572 aa10.87□□□□□ -0.67
Shroom3-201ENSMUST00000113051 Gm10308Q9CVR5 141 aa10.85□□□□□ -0.67
Shroom3-201ENSMUST00000113051 Krtap16-1A2A5X5 502 aa10.84□□□□□ -0.67
Shroom3-201ENSMUST00000113051 AW011738F6S7Q2 159 aa10.84□□□□□ -0.67
Shroom3-201ENSMUST00000113051 CicQ924A2 2510 aa10.83□□□□□ -0.68
Shroom3-201ENSMUST00000113051 UtrnE9Q6R7 3430 aa10.82□□□□□ -0.68
Shroom3-201ENSMUST00000113051 Gm9508A0A1W2P7W0 230 aa10.82□□□□□ -0.68
Shroom3-201ENSMUST00000113051 Lelp1Q9DAE3 120 aa10.81□□□□□ -0.68
Shroom3-201ENSMUST00000113051 Spink7Q6IE32 76 aa10.81□□□□□ -0.68
Shroom3-201ENSMUST00000113051 Cep192E9Q4Y4 2514 aaKnown RBP10.81□□□□□ -0.68
Shroom3-201ENSMUST00000113051 Psors1c2Q80ZC9 134 aa10.8□□□□□ -0.68
Shroom3-201ENSMUST00000113051 Gm9821Q8K076 103 aa10.8□□□□□ -0.68
Shroom3-201ENSMUST00000113051 Gm42715A0A087WP63 3095 aaKnown RBP10.77□□□□□ -0.69
Shroom3-201ENSMUST00000113051 Chtf8P0CG14 533 aa10.75□□□□□ -0.69
Shroom3-201ENSMUST00000113051 Smim29Q8R043 75 aa10.75□□□□□ -0.69
Shroom3-201ENSMUST00000113051 Gm26620Q9CY65 116 aa10.73□□□□□ -0.69
Shroom3-201ENSMUST00000113051 Jbts17Q8CE72 3214 aa10.72□□□□□ -0.69
Shroom3-201ENSMUST00000113051 Rps28P62858 69 aaKnown RBP10.7□□□□□ -0.7
Shroom3-201ENSMUST00000113051 Prr13Q9CQJ5 137 aa10.67□□□□□ -0.7
Shroom3-201ENSMUST00000113051 Gm36176A0A1W2P8D5 158 aa10.67□□□□□ -0.7
Shroom3-201ENSMUST00000113051 Krtap15-1Q9QZU5 150 aa10.65□□□□□ -0.7
Shroom3-201ENSMUST00000113051 Abca12E9Q876 2595 aa10.65□□□□□ -0.7
Shroom3-201ENSMUST00000113051 2310034C09RikQ9D746 214 aa10.64□□□□□ -0.71
Shroom3-201ENSMUST00000113051 Gm7276Q3TYW4 209 aa10.63□□□□□ -0.71
Shroom3-201ENSMUST00000113051 Ankrd17Q99NH0 2603 aaKnown RBP10.63□□□□□ -0.71
Shroom3-201ENSMUST00000113051 Unc79Q0KK59 2596 aa10.62□□□□□ -0.71
Shroom3-201ENSMUST00000113051 Gm3880A0A1B0GSB3 72 aa10.62□□□□□ -0.71
Shroom3-201ENSMUST00000113051 Usp9yF8VPU6 2556 aa10.61□□□□□ -0.71
Shroom3-201ENSMUST00000113051 CnbpP53996 178 aaKnown RBP10.6□□□□□ -0.71
Shroom3-201ENSMUST00000113051 Fam104aA2A6P4 185 aa10.59□□□□□ -0.71
Shroom3-201ENSMUST00000113051 Ep400Q8CHI8 3072 aaKnown RBP10.59□□□□□ -0.71
Shroom3-201ENSMUST00000113051 Fam229bQ8CF36 80 aa10.58□□□□□ -0.72
Shroom3-201ENSMUST00000113051 Gm17349F7BGH6 99 aa10.58□□□□□ -0.72
Shroom3-201ENSMUST00000113051 Phxr4P15974 95 aa10.57□□□□□ -0.72
Shroom3-201ENSMUST00000113051 Zcchc13Q9D548 170 aa10.56□□□□□ -0.72
Shroom3-201ENSMUST00000113051 Gm11213A0A1B0GR83 88 aa10.56□□□□□ -0.72
Shroom3-201ENSMUST00000113051 Gm4491E0CX42 125 aa10.56□□□□□ -0.72
Shroom3-201ENSMUST00000113051 Gm21798J3QNU5 87 aa10.55□□□□□ -0.72
Shroom3-201ENSMUST00000113051 Dnah12Q3V0Q1 3086 aa10.55□□□□□ -0.72
Shroom3-201ENSMUST00000113051 Uqcr11Q9CPX8 56 aa10.55□□□□□ -0.72
Shroom3-201ENSMUST00000113051 CriptO70333 101 aa10.55□□□□□ -0.72
Shroom3-201ENSMUST00000113051 NbdyA0A0N4SUI7 68 aa10.53□□□□□ -0.72
Shroom3-201ENSMUST00000113051 Zfp292Q9Z2U2 2698 aa10.52□□□□□ -0.72
Shroom3-201ENSMUST00000113051 6030445D17RikE9Q8F9 148 aa10.51□□□□□ -0.73
Shroom3-201ENSMUST00000113051 Nsd1O88491 2588 aaKnown RBP10.51□□□□□ -0.73
Shroom3-201ENSMUST00000113051 Lama3Q61789 3330 aa10.51□□□□□ -0.73
Shroom3-201ENSMUST00000113051 Dmbt1Q60997 2085 aa10.5□□□□□ -0.73
Shroom3-201ENSMUST00000113051 Cypt14J3QPF7 87 aa10.49□□□□□ -0.73
Shroom3-201ENSMUST00000113051 Myo18bE9PV66 2605 aa10.45□□□□□ -0.74
Shroom3-201ENSMUST00000113051 Prune2Q52KR3 3084 aa10.44□□□□□ -0.74
Shroom3-201ENSMUST00000113051 Nbeal1E9PYP2 2688 aa10.42□□□□□ -0.74
Shroom3-201ENSMUST00000113051 CenpfE9Q3P4 2997 aaKnown RBP10.39□□□□□ -0.75
Shroom3-201ENSMUST00000113051 Gm9955Q8CEJ8 102 aa10.37□□□□□ -0.75
Shroom3-201ENSMUST00000113051 Usp24B1AY13 2617 aaKnown RBP10.36□□□□□ -0.75
Shroom3-201ENSMUST00000113051 Gm9507D3Z5T3 223 aa10.35□□□□□ -0.75
Shroom3-201ENSMUST00000113051 Gm10065F6TJM2 114 aa10.34□□□□□ -0.75
Shroom3-201ENSMUST00000113051 Bod1lE9Q6J5 3032 aa10.34□□□□□ -0.75
Shroom3-201ENSMUST00000113051 TrioQ0KL02 3102 aa10.33□□□□□ -0.76
Shroom3-201ENSMUST00000113051 Ankrd11E9Q4F7 2643 aa10.32□□□□□ -0.76
Shroom3-201ENSMUST00000113051 Gm10320E9PW43 113 aa10.3□□□□□ -0.76
Shroom3-201ENSMUST00000113051 Gm10643Q3URG9 111 aa10.3□□□□□ -0.76
Shroom3-201ENSMUST00000113051 Fam229aB2KGE5 128 aa10.3□□□□□ -0.76
Shroom3-201ENSMUST00000113051 AtrQ9JKK8 2635 aa10.3□□□□□ -0.76
Shroom3-201ENSMUST00000113051 FlnbQ80X90 2602 aaKnown RBP10.29□□□□□ -0.76
Shroom3-201ENSMUST00000113051 Camk2n1Q6QWF9 78 aa10.29□□□□□ -0.76
Shroom3-201ENSMUST00000113051 Cep350E9Q309 3095 aa10.26□□□□□ -0.77
Retrieved 100 of 22,080 RNA–protein pairs in 328.5 ms