RNA–Protein interactions for RNA: ENSMUST00000109544.8

Vcan-202, Transcript of Versican core protein, mousemouse

TSL 5 BASIC

Gene Vcan, Length 5,702 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vcan-202ENSMUST00000109544 Sprr4Q8CGN8 76 aa7.16□□□□□ -1.26
Vcan-202ENSMUST00000109544 Gm5617Q91VN2 117 aa7.16□□□□□ -1.26
Vcan-202ENSMUST00000109544 1810062G17RikG3X8Y2 129 aa7.15□□□□□ -1.27
Vcan-202ENSMUST00000109544 Hcfc1Q61191 2045 aaKnown RBP7.14□□□□□ -1.27
Vcan-202ENSMUST00000109544 CriptO70333 101 aa7.12□□□□□ -1.27
Vcan-202ENSMUST00000109544 Ttc28Q80XJ3 2450 aa7.11□□□□□ -1.27
Vcan-202ENSMUST00000109544 Gm11213A0A1B0GR83 88 aa7.11□□□□□ -1.27
Vcan-202ENSMUST00000109544 Phxr5P08399 672 aa7.11□□□□□ -1.27
Vcan-202ENSMUST00000109544 Col4a2P08122 1707 aa7.11□□□□□ -1.27
Vcan-202ENSMUST00000109544 Krtap24-1G3X9A2 248 aa7.11□□□□□ -1.27
Vcan-202ENSMUST00000109544 Spata3Q9D9T6 193 aa7.1□□□□□ -1.27
Vcan-202ENSMUST00000109544 Cypt15B1AXS0 87 aa7.1□□□□□ -1.27
Vcan-202ENSMUST00000109544 Notch2O35516 2470 aa7.08□□□□□ -1.28
Vcan-202ENSMUST00000109544 Eif4ebp3Q80VV3 101 aa7.08□□□□□ -1.28
Vcan-202ENSMUST00000109544 Fam168bQ80XQ8 194 aa7.07□□□□□ -1.28
Vcan-202ENSMUST00000109544 Krtap11-1E9Q2E9 183 aa7.06□□□□□ -1.28
Vcan-202ENSMUST00000109544 A330070K13RikQ8CA53 115 aa7.06□□□□□ -1.28
Vcan-202ENSMUST00000109544 Chtf8P0CG14 533 aa7.04□□□□□ -1.28
Vcan-202ENSMUST00000109544 Gm21798J3QNU5 87 aa7.04□□□□□ -1.28
Vcan-202ENSMUST00000109544 Lypd5Q9D7Z7 256 aa7.03□□□□□ -1.28
Vcan-202ENSMUST00000109544 Gm26620Q9CY65 116 aa7.02□□□□□ -1.29
Vcan-202ENSMUST00000109544 Tln1P26039 2541 aaKnown RBP7□□□□□ -1.29
Vcan-202ENSMUST00000109544 CnbpP53996 178 aaKnown RBP6.99□□□□□ -1.29
Vcan-202ENSMUST00000109544 Zfp462B1AWL2 2495 aaKnown RBP6.99□□□□□ -1.29
Vcan-202ENSMUST00000109544 Fam104aA2A6P4 185 aa6.99□□□□□ -1.29
Vcan-202ENSMUST00000109544 Gm9955Q8CEJ8 102 aa6.98□□□□□ -1.29
Vcan-202ENSMUST00000109544 C530025M09RikF6RGA8 229 aa6.98□□□□□ -1.29
Vcan-202ENSMUST00000109544 Gm3285A0A1W2P7U0 201 aa6.98□□□□□ -1.29
Vcan-202ENSMUST00000109544 Pkd1l2Q7TN88 2461 aa6.97□□□□□ -1.29
Vcan-202ENSMUST00000109544 PolqQ8CGS6 2544 aa6.96□□□□□ -1.29
Vcan-202ENSMUST00000109544 2310034C09RikQ9D746 214 aa6.95□□□□□ -1.3
Vcan-202ENSMUST00000109544 Pla2g10Q9QXX3 151 aa6.95□□□□□ -1.3
Vcan-202ENSMUST00000109544 Zcchc13Q9D548 170 aa6.93□□□□□ -1.3
Vcan-202ENSMUST00000109544 Defb9Q8R2I6 67 aa6.93□□□□□ -1.3
Vcan-202ENSMUST00000109544 Cypt14J3QPF7 87 aa6.9□□□□□ -1.3
Vcan-202ENSMUST00000109544 Usp9xP70398 2559 aaKnown RBP6.89□□□□□ -1.31
Vcan-202ENSMUST00000109544 Fam229bQ8CF36 80 aa6.89□□□□□ -1.31
Vcan-202ENSMUST00000109544 Sptbn4E9PX29 2561 aa6.86□□□□□ -1.31
Vcan-202ENSMUST00000109544 Gm3880A0A1B0GSB3 72 aa6.84□□□□□ -1.31
Vcan-202ENSMUST00000109544 Ptpn13Q64512 2453 aa6.84□□□□□ -1.32
Vcan-202ENSMUST00000109544 Cep192E9Q4Y4 2514 aaKnown RBP6.82□□□□□ -1.32
Vcan-202ENSMUST00000109544 6030445D17RikE9Q8F9 148 aa6.79□□□□□ -1.32
Vcan-202ENSMUST00000109544 NbdyA0A0N4SUI7 68 aa6.77□□□□□ -1.32
Vcan-202ENSMUST00000109544 Anapc11Q9CPX9 84 aa6.77□□□□□ -1.33
Vcan-202ENSMUST00000109544 OxtP35454 125 aa6.77□□□□□ -1.33
Vcan-202ENSMUST00000109544 Gm10065F6TJM2 114 aa6.77□□□□□ -1.33
Vcan-202ENSMUST00000109544 Gm9821Q8K076 103 aa6.76□□□□□ -1.33
Vcan-202ENSMUST00000109544 Plac8Q9JI48 112 aa6.75□□□□□ -1.33
Vcan-202ENSMUST00000109544 Smim29Q8R043 75 aa6.73□□□□□ -1.33
Vcan-202ENSMUST00000109544 Gm4491E0CX42 125 aa6.73□□□□□ -1.33
Vcan-202ENSMUST00000109544 Piezo2Q8CD54 2822 aa6.73□□□□□ -1.33
Vcan-202ENSMUST00000109544 Gm3646F6S692 53 aa6.72□□□□□ -1.33
Vcan-202ENSMUST00000109544 Odf3bQ5M8M2 238 aa6.72□□□□□ -1.33
Vcan-202ENSMUST00000109544 TrrapQ80YV3 2565 aaKnown RBP6.7□□□□□ -1.34
Vcan-202ENSMUST00000109544 Setd2E9Q5F9 2537 aa6.69□□□□□ -1.34
Vcan-202ENSMUST00000109544 Alms1Q8K4E0 3251 aa6.69□□□□□ -1.34
Vcan-202ENSMUST00000109544 Spink7Q6IE32 76 aa6.69□□□□□ -1.34
Vcan-202ENSMUST00000109544 Gm10139O88245 57 aa6.67□□□□□ -1.34
Vcan-202ENSMUST00000109544 Gm3250E9Q1M3 230 aa6.65□□□□□ -1.34
Vcan-202ENSMUST00000109544 Gm37013Q8K491 104 aa6.65□□□□□ -1.34
Vcan-202ENSMUST00000109544 Gm10320E9PW43 113 aa6.65□□□□□ -1.35
Vcan-202ENSMUST00000109544 Epg5Q80TA9 2572 aa6.64□□□□□ -1.35
Vcan-202ENSMUST00000109544 MtorQ9JLN9 2549 aa6.63□□□□□ -1.35
Vcan-202ENSMUST00000109544 Camk2n1Q6QWF9 78 aa6.62□□□□□ -1.35
Vcan-202ENSMUST00000109544 SetxA2AKX3 2646 aa6.61□□□□□ -1.35
Vcan-202ENSMUST00000109544 Gm11565A2A4M7 156 aa6.61□□□□□ -1.35
Vcan-202ENSMUST00000109544 SrcapA0A087WQ44 3271 aa6.61□□□□□ -1.35
Vcan-202ENSMUST00000109544 Romo1P60603 79 aa6.6□□□□□ -1.35
Vcan-202ENSMUST00000109544 Cystm1Q8K353 104 aa6.6□□□□□ -1.35
Vcan-202ENSMUST00000109544 Rpl37Q9D823 97 aa6.59□□□□□ -1.35
Vcan-202ENSMUST00000109544 1700042G07RikB1AUF7 90 aa6.59□□□□□ -1.36
Vcan-202ENSMUST00000109544 Gm16253D3Z167 63 aa6.59□□□□□ -1.36
Vcan-202ENSMUST00000109544 Sprr1aQ62266 144 aa6.55□□□□□ -1.36
Vcan-202ENSMUST00000109544 4933415A04RikQ9D443 101 aa6.55□□□□□ -1.36
Vcan-202ENSMUST00000109544 Dmbt1Q60997 2085 aa6.54□□□□□ -1.36
Vcan-202ENSMUST00000109544 FlnbQ80X90 2602 aaKnown RBP6.54□□□□□ -1.36
Vcan-202ENSMUST00000109544 A730071L15RikQ8C4X0 137 aa6.53□□□□□ -1.36
Vcan-202ENSMUST00000109544 Nbeal1E9PYP2 2688 aa6.51□□□□□ -1.37
Vcan-202ENSMUST00000109544 Fam229aB2KGE5 128 aa6.51□□□□□ -1.37
Vcan-202ENSMUST00000109544 Golgb1E9PVZ8 3238 aa6.48□□□□□ -1.37
Vcan-202ENSMUST00000109544 Usp9yF8VPU6 2556 aa6.47□□□□□ -1.37
Vcan-202ENSMUST00000109544 Bahcc1Q3UHR0 2643 aa6.47□□□□□ -1.37
Vcan-202ENSMUST00000109544 Gm10382Q3V0T5 144 aa6.45□□□□□ -1.38
Vcan-202ENSMUST00000109544 Ankrd17Q99NH0 2603 aaKnown RBP6.45□□□□□ -1.38
Vcan-202ENSMUST00000109544 Cox6b2Q80ZN9 88 aa6.44□□□□□ -1.38
Vcan-202ENSMUST00000109544 Ankrd11E9Q4F7 2643 aa6.44□□□□□ -1.38
Vcan-202ENSMUST00000109544 Sec61bQ9CQS8 96 aaKnown RBP6.43□□□□□ -1.38
Vcan-202ENSMUST00000109544 Krtap15-1Q9QZU5 150 aa6.43□□□□□ -1.38
Vcan-202ENSMUST00000109544 BC029722A0A0N4SW31 51 aa6.42□□□□□ -1.38
Vcan-202ENSMUST00000109544 Unc79Q0KK59 2596 aa6.4□□□□□ -1.39
Vcan-202ENSMUST00000109544 Gm5767A0A0J9YTU8 78 aa6.38□□□□□ -1.39
Vcan-202ENSMUST00000109544 Zfp292Q9Z2U2 2698 aa6.38□□□□□ -1.39
Vcan-202ENSMUST00000109544 SmcpP15265 143 aa6.36□□□□□ -1.39
Vcan-202ENSMUST00000109544 Abca12E9Q876 2595 aa6.35□□□□□ -1.39
Vcan-202ENSMUST00000109544 Krtap29-1A2A5X4 342 aa6.34□□□□□ -1.39
Vcan-202ENSMUST00000109544 Myo15bI7HPW8 3033 aa6.34□□□□□ -1.39
Vcan-202ENSMUST00000109544 Gm3233E9Q2H5 230 aa6.34□□□□□ -1.4
Vcan-202ENSMUST00000109544 Akap13E9Q394 2776 aa6.33□□□□□ -1.4
Vcan-202ENSMUST00000109544 CicQ924A2 2510 aa6.33□□□□□ -1.4
Vcan-202ENSMUST00000109544 Gm19426M0QWC7 77 aa6.33□□□□□ -1.4
Retrieved 100 of 22,080 RNA–protein pairs in 53.8 ms