RNA–Protein interactions for RNA: ENSMUST00000097822.9

Ubr4-201, Transcript of E3 ubiquitin-protein ligase UBR4, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Ubr4, Length 15,928 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr4-201ENSMUST00000097822 Gm10999F6Q4M4 69 aa4.04□□□□□ -1.76
Ubr4-201ENSMUST00000097822 Chtf8P0CG14 533 aa4.04□□□□□ -1.76
Ubr4-201ENSMUST00000097822 Uqcr11Q9CPX8 56 aa4.04□□□□□ -1.76
Ubr4-201ENSMUST00000097822 Lama3Q61789 3330 aa4.04□□□□□ -1.76
Ubr4-201ENSMUST00000097822 RetnlbQ99P86 105 aa4.04□□□□□ -1.76
Ubr4-201ENSMUST00000097822 Col27a1Q5QNQ9 1845 aa4.04□□□□□ -1.76
Ubr4-201ENSMUST00000097822 Lce6aD3YV94 81 aa4.04□□□□□ -1.76
Ubr4-201ENSMUST00000097822 Q8BGJ3 129 aa4.03□□□□□ -1.76
Ubr4-201ENSMUST00000097822 AY074887Q8R5F9 132 aa4.03□□□□□ -1.76
Ubr4-201ENSMUST00000097822 PcntP48725 2898 aa4.03□□□□□ -1.76
Ubr4-201ENSMUST00000097822 Defb1P56386 69 aa4.03□□□□□ -1.76
Ubr4-201ENSMUST00000097822 Usp9yF8VPU6 2556 aa4.03□□□□□ -1.76
Ubr4-201ENSMUST00000097822 Epg5Q80TA9 2572 aa4.02□□□□□ -1.77
Ubr4-201ENSMUST00000097822 Nupr2Q497P3 102 aa4.02□□□□□ -1.77
Ubr4-201ENSMUST00000097822 Gm26620Q9CY65 116 aa4.01□□□□□ -1.77
Ubr4-201ENSMUST00000097822 Psors1c2Q80ZC9 134 aa4□□□□□ -1.77
Ubr4-201ENSMUST00000097822 Adm2Q7TNK8 150 aa4□□□□□ -1.77
Ubr4-201ENSMUST00000097822 Kmt2bO08550 2713 aa4□□□□□ -1.77
Ubr4-201ENSMUST00000097822 Pla2g2cP48076 150 aa4□□□□□ -1.77
Ubr4-201ENSMUST00000097822 Gm11627A6PWP4 55 aa4□□□□□ -1.77
Ubr4-201ENSMUST00000097822 Col4a2P08122 1707 aa4□□□□□ -1.77
Ubr4-201ENSMUST00000097822 C530025M09RikF6RGA8 229 aa4□□□□□ -1.77
Ubr4-201ENSMUST00000097822 HrnrQ8VHD8 2496 aa4□□□□□ -1.77
Ubr4-201ENSMUST00000097822 Ankrd11E9Q4F7 2643 aa3.99□□□□□ -1.77
Ubr4-201ENSMUST00000097822 1700042G07RikB1AUF7 90 aa3.99□□□□□ -1.77
Ubr4-201ENSMUST00000097822 Gm7276Q3TYW4 209 aa3.99□□□□□ -1.77
Ubr4-201ENSMUST00000097822 Gm3646F6S692 53 aa3.99□□□□□ -1.77
Ubr4-201ENSMUST00000097822 Sprr1bQ62267 153 aa3.99□□□□□ -1.77
Ubr4-201ENSMUST00000097822 Chd8Q09XV5 2582 aaKnown RBP3.99□□□□□ -1.77
Ubr4-201ENSMUST00000097822 Defb39Q70KL3 74 aa3.98□□□□□ -1.77
Ubr4-201ENSMUST00000097822 Prol1E9PYQ4 312 aa3.98□□□□□ -1.77
Ubr4-201ENSMUST00000097822 Gm20538F6Z9R1 75 aa3.98□□□□□ -1.77
Ubr4-201ENSMUST00000097822 Bahcc1Q3UHR0 2643 aa3.98□□□□□ -1.77
Ubr4-201ENSMUST00000097822 Gm10642Q3TWM1 71 aa3.97□□□□□ -1.77
Ubr4-201ENSMUST00000097822 Krtap11-1E9Q2E9 183 aa3.97□□□□□ -1.77
Ubr4-201ENSMUST00000097822 HttP42859 3119 aa3.97□□□□□ -1.77
Ubr4-201ENSMUST00000097822 Tnrc18Q80WC3 2878 aa3.97□□□□□ -1.77
Ubr4-201ENSMUST00000097822 Fam168bQ80XQ8 194 aa3.96□□□□□ -1.78
Ubr4-201ENSMUST00000097822 Cypt15B1AXS0 87 aa3.96□□□□□ -1.78
Ubr4-201ENSMUST00000097822 Gm9821Q8K076 103 aa3.96□□□□□ -1.78
Ubr4-201ENSMUST00000097822 Jbts17Q8CE72 3214 aa3.96□□□□□ -1.78
Ubr4-201ENSMUST00000097822 Myo18bE9PV66 2605 aa3.96□□□□□ -1.78
Ubr4-201ENSMUST00000097822 4933415A04RikQ9D443 101 aa3.96□□□□□ -1.78
Ubr4-201ENSMUST00000097822 Snhg11Q4G0K9 87 aa3.95□□□□□ -1.78
Ubr4-201ENSMUST00000097822 Gm10320E9PW43 113 aa3.95□□□□□ -1.78
Ubr4-201ENSMUST00000097822 Rnase13Q5GAM7 153 aa3.95□□□□□ -1.78
Ubr4-201ENSMUST00000097822 Piezo1E2JF22 2547 aa3.95□□□□□ -1.78
Ubr4-201ENSMUST00000097822 Mki67E9PVX6 3177 aaKnown RBP3.94□□□□□ -1.78
Ubr4-201ENSMUST00000097822 Spata3Q9D9T6 193 aa3.94□□□□□ -1.78
Ubr4-201ENSMUST00000097822 Smim29Q8R043 75 aa3.94□□□□□ -1.78
Ubr4-201ENSMUST00000097822 Srsf12Q8C8K3 266 aa3.94□□□□□ -1.78
Ubr4-201ENSMUST00000097822 Lypd5Q9D7Z7 256 aa3.93□□□□□ -1.78
Ubr4-201ENSMUST00000097822 Sprr4Q8CGN8 76 aa3.93□□□□□ -1.78
Ubr4-201ENSMUST00000097822 1600014C23RikQ9DAX4 101 aa3.93□□□□□ -1.78
Ubr4-201ENSMUST00000097822 4930507D05RikQ8C9C9 103 aa3.93□□□□□ -1.78
Ubr4-201ENSMUST00000097822 Phf5aP83870 110 aaKnown RBP3.92□□□□□ -1.78
Ubr4-201ENSMUST00000097822 CenpfE9Q3P4 2997 aaKnown RBP3.92□□□□□ -1.78
Ubr4-201ENSMUST00000097822 Gm16181B0V2H2 73 aa3.91□□□□□ -1.78
Ubr4-201ENSMUST00000097822 Col4a4Q9QZR9 1682 aa3.91□□□□□ -1.78
Ubr4-201ENSMUST00000097822 Ankrd17Q99NH0 2603 aaKnown RBP3.91□□□□□ -1.78
Ubr4-201ENSMUST00000097822 Zcchc13Q9D548 170 aa3.91□□□□□ -1.78
Ubr4-201ENSMUST00000097822 Prrc2cQ3TLH4 2846 aaKnown RBP3.91□□□□□ -1.78
Ubr4-201ENSMUST00000097822 Usp34Q6ZQ93 3582 aa3.91□□□□□ -1.78
Ubr4-201ENSMUST00000097822 Gm7173A0A0G2JEB6 3132 aa3.9□□□□□ -1.78
Ubr4-201ENSMUST00000097822 Pla2g10Q9QXX3 151 aa3.9□□□□□ -1.79
Ubr4-201ENSMUST00000097822 A730071L15RikQ8C4X0 137 aa3.89□□□□□ -1.79
Ubr4-201ENSMUST00000097822 Cfap54Q8C6S9 3106 aa3.89□□□□□ -1.79
Ubr4-201ENSMUST00000097822 TrrapQ80YV3 2565 aaKnown RBP3.88□□□□□ -1.79
Ubr4-201ENSMUST00000097822 FasnP19096 2504 aaKnown RBP3.88□□□□□ -1.79
Ubr4-201ENSMUST00000097822 Vps13aQ5H8C4 3166 aa3.87□□□□□ -1.79
Ubr4-201ENSMUST00000097822 Ly6g6cQ9Z1Q4 126 aa3.87□□□□□ -1.79
Ubr4-201ENSMUST00000097822 Chd7A2AJK6 2986 aaKnown RBP3.87□□□□□ -1.79
Ubr4-201ENSMUST00000097822 Gm3880A0A1B0GSB3 72 aa3.87□□□□□ -1.79
Ubr4-201ENSMUST00000097822 Cypt14J3QPF7 87 aa3.86□□□□□ -1.79
Ubr4-201ENSMUST00000097822 Abca12E9Q876 2595 aa3.86□□□□□ -1.79
Ubr4-201ENSMUST00000097822 Gm27235Q3UW50 83 aa3.86□□□□□ -1.79
Ubr4-201ENSMUST00000097822 Gm21798J3QNU5 87 aa3.86□□□□□ -1.79
Ubr4-201ENSMUST00000097822 Prune2Q52KR3 3084 aa3.86□□□□□ -1.79
Ubr4-201ENSMUST00000097822 Spaca4Q80ZQ0 127 aa3.86□□□□□ -1.79
Ubr4-201ENSMUST00000097822 Unc79Q0KK59 2596 aa3.85□□□□□ -1.79
Ubr4-201ENSMUST00000097822 Gpr15lA0A0B4J1N3 78 aa3.85□□□□□ -1.79
Ubr4-201ENSMUST00000097822 Fam104aA2A6P4 185 aa3.84□□□□□ -1.79
Ubr4-201ENSMUST00000097822 2310034C09RikQ9D746 214 aa3.84□□□□□ -1.8
Ubr4-201ENSMUST00000097822 CriptO70333 101 aa3.84□□□□□ -1.8
Ubr4-201ENSMUST00000097822 Defb2P82020 71 aa3.84□□□□□ -1.8
Ubr4-201ENSMUST00000097822 Gm3285A0A1W2P7U0 201 aa3.84□□□□□ -1.8
Ubr4-201ENSMUST00000097822 Col12a1Q60847 3120 aa3.83□□□□□ -1.8
Ubr4-201ENSMUST00000097822 Gm37013Q8K491 104 aa3.83□□□□□ -1.8
Ubr4-201ENSMUST00000097822 Gcn1E9PVA8 2671 aaKnown RBP3.83□□□□□ -1.8
Ubr4-201ENSMUST00000097822 Fn1P11276 2477 aaKnown RBP3.82□□□□□ -1.8
Ubr4-201ENSMUST00000097822 6030445D17RikE9Q8F9 148 aa3.81□□□□□ -1.8
Ubr4-201ENSMUST00000097822 Rev3lQ61493 3122 aa3.8□□□□□ -1.8
Ubr4-201ENSMUST00000097822 Frem2Q6NVD0 3160 aa3.8□□□□□ -1.8
Ubr4-201ENSMUST00000097822 Cdh23Q99PF4 3354 aa3.8□□□□□ -1.8
Ubr4-201ENSMUST00000097822 Notch1Q01705 2531 aa3.8□□□□□ -1.8
Ubr4-201ENSMUST00000097822 Zfp292Q9Z2U2 2698 aa3.8□□□□□ -1.8
Ubr4-201ENSMUST00000097822 Anapc11Q9CPX9 84 aa3.79□□□□□ -1.8
Ubr4-201ENSMUST00000097822 Krtap24-1G3X9A2 248 aa3.79□□□□□ -1.8
Ubr4-201ENSMUST00000097822 Usp24B1AY13 2617 aaKnown RBP3.78□□□□□ -1.8
Ubr4-201ENSMUST00000097822 Unc80Q8BLN6 3261 aa3.77□□□□□ -1.81
Retrieved 100 of 22,080 RNA–protein pairs in 62.2 ms