RNA–Protein interactions for RNA: ENSMUST00000097822.9

Ubr4-201, Transcript of E3 ubiquitin-protein ligase UBR4, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Ubr4, Length 15,928 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr4-201ENSMUST00000097822 Rpgrip1Q9EPQ2 1331 aa10.22□□□□□ -0.77
Ubr4-201ENSMUST00000097822 Rhox8Q6VSS7 320 aa10.07□□□□□ -0.8
Ubr4-201ENSMUST00000097822 Las1lA2BE28 776 aaKnown RBP9.92□□□□□ -0.82
Ubr4-201ENSMUST00000097822 Ehmt2Q9Z148 1263 aaKnown RBP9.76□□□□□ -0.85
Ubr4-201ENSMUST00000097822 Cngb1E1AZ71 1325 aa9.68□□□□□ -0.86
Ubr4-201ENSMUST00000097822 Acin1Q9JIX8 1338 aaKnown RBP9.46□□□□□ -0.9
Ubr4-201ENSMUST00000097822 CenpbP27790 599 aa9.45□□□□□ -0.9
Ubr4-201ENSMUST00000097822 Zeb1Q64318 1117 aa9.43□□□□□ -0.9
Ubr4-201ENSMUST00000097822 Pelp1Q9DBD5 1123 aaKnown RBP9.4□□□□□ -0.91
Ubr4-201ENSMUST00000097822 Myt1Q8CFC2 1127 aa9.38□□□□□ -0.91
Ubr4-201ENSMUST00000097822 Pcgf6Q99NA9 353 aa9.38□□□□□ -0.91
Ubr4-201ENSMUST00000097822 Wdr66E9Q743 1299 aa9.37□□□□□ -0.91
Ubr4-201ENSMUST00000097822 Amer1Q7TS75 1132 aa9.26□□□□□ -0.93
Ubr4-201ENSMUST00000097822 DiexfQ8BTT6 772 aaKnown RBP9.24□□□□□ -0.93
Ubr4-201ENSMUST00000097822 Supt5hO55201 1082 aaKnown RBP9.1□□□□□ -0.95
Ubr4-201ENSMUST00000097822 Cdk11bP24788 784 aaKnown RBP9.05□□□□□ -0.96
Ubr4-201ENSMUST00000097822 Ttbk1Q6PCN3 1308 aa9.05□□□□□ -0.96
Ubr4-201ENSMUST00000097822 NefmP08553 848 aa9.04□□□□□ -0.96
Ubr4-201ENSMUST00000097822 Neurod1Q60867 357 aa8.98□□□□□ -0.97
Ubr4-201ENSMUST00000097822 Ccdc136Q3TVA9 1136 aa8.97□□□□□ -0.97
Ubr4-201ENSMUST00000097822 Nop58Q6DFW4 536 aaKnown RBP8.92□□□□□ -0.98
Ubr4-201ENSMUST00000097822 Gab3Q8BSM5 595 aa8.92□□□□□ -0.98
Ubr4-201ENSMUST00000097822 Trim41Q5NCC3 630 aa8.88□□□□□ -0.99
Ubr4-201ENSMUST00000097822 Tnnt3Q9QZ47 272 aa8.85□□□□□ -0.99
Ubr4-201ENSMUST00000097822 Csrnp3P59055 597 aa8.85□□□□□ -0.99
Ubr4-201ENSMUST00000097822 Stra8P70278 393 aa8.85□□□□□ -0.99
Ubr4-201ENSMUST00000097822 4933416C03RikQ3V063 378 aa8.83□□□□□ -1
Ubr4-201ENSMUST00000097822 Rtl5Q5DTT4 599 aa8.82□□□□□ -1
Ubr4-201ENSMUST00000097822 Slc24a1Q91WD8 1130 aa8.79□□□□□ -1
Ubr4-201ENSMUST00000097822 Gm38655A0A286YDK6 273 aa8.78□□□□□ -1
Ubr4-201ENSMUST00000097822 Ppargc1bQ8VHJ7 1014 aa8.78□□□□□ -1
Ubr4-201ENSMUST00000097822 UbtfP25976 765 aaKnown RBP8.77□□□□□ -1.01
Ubr4-201ENSMUST00000097822 Anks4bQ8K3X6 423 aa8.77□□□□□ -1.01
Ubr4-201ENSMUST00000097822 Ccdc180J3QNE4 1664 aa8.77□□□□□ -1.01
Ubr4-201ENSMUST00000097822 Aplp2Q06335 707 aa8.76□□□□□ -1.01
Ubr4-201ENSMUST00000097822 HrcG5E8J6 738 aa8.74□□□□□ -1.01
Ubr4-201ENSMUST00000097822 1700123L14RikQ3V2K7 440 aa8.73□□□□□ -1.01
Ubr4-201ENSMUST00000097822 4930567H17RikQ3V0K5 233 aa8.71□□□□□ -1.01
Ubr4-201ENSMUST00000097822 Bcl11aQ9QYE3 773 aa8.71□□□□□ -1.02
Ubr4-201ENSMUST00000097822 Ube2uB1AUC4 352 aa8.71□□□□□ -1.02
Ubr4-201ENSMUST00000097822 Anp32aO35381 247 aa8.68□□□□□ -1.02
Ubr4-201ENSMUST00000097822 Myt1lP97500 1187 aa8.64□□□□□ -1.03
Ubr4-201ENSMUST00000097822 Sall2Q9QX96 1004 aa8.63□□□□□ -1.03
Ubr4-201ENSMUST00000097822 Eif5bQ05D44 1216 aaKnown RBP8.6□□□□□ -1.03
Ubr4-201ENSMUST00000097822 Mier1Q5UAK0 511 aa8.6□□□□□ -1.03
Ubr4-201ENSMUST00000097822 Esf1Q3V1V3 845 aaKnown RBP8.59□□□□□ -1.03
Ubr4-201ENSMUST00000097822 ClspnQ80YR7 1315 aa8.58□□□□□ -1.04
Ubr4-201ENSMUST00000097822 Npm2Q80W85 207 aa8.56□□□□□ -1.04
Ubr4-201ENSMUST00000097822 DaxxO35613 739 aa8.55□□□□□ -1.04
Ubr4-201ENSMUST00000097822 TonslQ6NZL6 1363 aa8.54□□□□□ -1.04
Ubr4-201ENSMUST00000097822 Rtl1Q7M732 1744 aa8.54□□□□□ -1.04
Ubr4-201ENSMUST00000097822 Fam71e1A1L3C1 212 aa8.53□□□□□ -1.04
Ubr4-201ENSMUST00000097822 Mapk8ip2Q9ERE9 830 aa8.5□□□□□ -1.05
Ubr4-201ENSMUST00000097822 NrdcQ8BHG1 1161 aa8.5□□□□□ -1.05
Ubr4-201ENSMUST00000097822 NclP09405 707 aaKnown RBP8.49□□□□□ -1.05
Ubr4-201ENSMUST00000097822 NischQ80TM9 1593 aa8.47□□□□□ -1.05
Ubr4-201ENSMUST00000097822 NeflP08551 543 aa8.47□□□□□ -1.05
Ubr4-201ENSMUST00000097822 Dcaf1Q80TR8 1506 aa8.42□□□□□ -1.06
Ubr4-201ENSMUST00000097822 Ccdc9Q8VC31 543 aaKnown RBP8.42□□□□□ -1.06
Ubr4-201ENSMUST00000097822 Ppp4r2Q0VGB7 417 aa8.39□□□□□ -1.07
Ubr4-201ENSMUST00000097822 Calr4Q3TQS0 420 aa8.37□□□□□ -1.07
Ubr4-201ENSMUST00000097822 Ap3b1Q9Z1T1 1105 aa8.37□□□□□ -1.07
Ubr4-201ENSMUST00000097822 Hsp90aa1P07901 733 aaKnown RBP8.36□□□□□ -1.07
Ubr4-201ENSMUST00000097822 Anp32bQ9EST5 272 aaKnown RBP8.32□□□□□ -1.08
Ubr4-201ENSMUST00000097822 PrkcshO08795 521 aa8.31□□□□□ -1.08
Ubr4-201ENSMUST00000097822 Ythdc1E9Q5K9 736 aaKnown RBP8.31□□□□□ -1.08
Ubr4-201ENSMUST00000097822 Wdr43Q6ZQL4 677 aaKnown RBP8.29□□□□□ -1.08
Ubr4-201ENSMUST00000097822 Fam50aQ9WV03 339 aaKnown RBP8.29□□□□□ -1.08
Ubr4-201ENSMUST00000097822 Irx3P81067 507 aa8.28□□□□□ -1.08
Ubr4-201ENSMUST00000097822 Ccdc27Q3V036 639 aa8.27□□□□□ -1.08
Ubr4-201ENSMUST00000097822 SafbD3YXK2 937 aaKnown RBP8.27□□□□□ -1.09
Ubr4-201ENSMUST00000097822 Aebp2Q9Z248 504 aaKnown RBP8.27□□□□□ -1.09
Ubr4-201ENSMUST00000097822 Hnrnpul2Q00PI9 745 aaKnown RBP8.24□□□□□ -1.09
Ubr4-201ENSMUST00000097822 Eid3Q3V124 375 aa8.21□□□□□ -1.1
Ubr4-201ENSMUST00000097822 ArxO35085 564 aa8.2□□□□□ -1.1
Ubr4-201ENSMUST00000097822 Pknox2Q8BG99 474 aa8.2□□□□□ -1.1
Ubr4-201ENSMUST00000097822 Lmod3E9QA62 571 aa8.17□□□□□ -1.1
Ubr4-201ENSMUST00000097822 Upf2A2AT37 1269 aaKnown RBP8.15□□□□□ -1.1
Ubr4-201ENSMUST00000097822 Hdac5Q9Z2V6 1113 aa8.15□□□□□ -1.1
Ubr4-201ENSMUST00000097822 Plekhg3Q4VAC9 1341 aa8.14□□□□□ -1.11
Ubr4-201ENSMUST00000097822 Gtf3c3Q3TMP1 882 aa8.13□□□□□ -1.11
Ubr4-201ENSMUST00000097822 CanxP35564 591 aaKnown RBP8.13□□□□□ -1.11
Ubr4-201ENSMUST00000097822 Ifnlr1Q8CGK5 535 aa8.12□□□□□ -1.11
Ubr4-201ENSMUST00000097822 Taok2Q6ZQ29 1240 aa8.11□□□□□ -1.11
Ubr4-201ENSMUST00000097822 Zbtb7cQ8VCZ7 619 aa8.09□□□□□ -1.11
Ubr4-201ENSMUST00000097822 Supt16hQ920B9 1047 aa8.09□□□□□ -1.11
Ubr4-201ENSMUST00000097822 Trim44Q9QXA7 346 aa8.08□□□□□ -1.12
Ubr4-201ENSMUST00000097822 Mrs2Q5NCE8 434 aa8.06□□□□□ -1.12
Ubr4-201ENSMUST00000097822 AU015836B2RUM3 263 aa8.06□□□□□ -1.12
Ubr4-201ENSMUST00000097822 P3h3Q8CG70 732 aa8.06□□□□□ -1.12
Ubr4-201ENSMUST00000097822 CatipB9EKE5 520 aa8.05□□□□□ -1.12
Ubr4-201ENSMUST00000097822 Cep164Q5DU05 1446 aa8.05□□□□□ -1.12
Ubr4-201ENSMUST00000097822 DekQ7TNV0 380 aaKnown RBP8.03□□□□□ -1.12
Ubr4-201ENSMUST00000097822 Vsig10D3YX43 558 aa8.02□□□□□ -1.13
Ubr4-201ENSMUST00000097822 Nolc1E9Q5C9 702 aaKnown RBP8.01□□□□□ -1.13
Ubr4-201ENSMUST00000097822 Plcd4Q8K3R3 807 aa8.01□□□□□ -1.13
Ubr4-201ENSMUST00000097822 Il27Q8K3I6 234 aa8.01□□□□□ -1.13
Ubr4-201ENSMUST00000097822 Slc4a3P16283 1227 aa8□□□□□ -1.13
Ubr4-201ENSMUST00000097822 Tnnt2P50752 301 aa8□□□□□ -1.13
Ubr4-201ENSMUST00000097822 Zbtb4Q5F293 982 aa7.99□□□□□ -1.13
Retrieved 100 of 22,080 RNA–protein pairs in 14.3 ms