RNA–Protein interactions for RNA: ENSMUST00000097822.9

Ubr4-201, Transcript of E3 ubiquitin-protein ligase UBR4, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Ubr4, Length 15,928 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr4-201ENSMUST00000097822 Rpgrip1Q9EPQ2 1331 aa10,22□□□□□ -0,77
Ubr4-201ENSMUST00000097822 Rhox8Q6VSS7 320 aa10,07□□□□□ -0,8
Ubr4-201ENSMUST00000097822 Las1lA2BE28 776 aaKnown RBP9,92□□□□□ -0,82
Ubr4-201ENSMUST00000097822 Ehmt2Q9Z148 1263 aaKnown RBP9,76□□□□□ -0,85
Ubr4-201ENSMUST00000097822 Cngb1E1AZ71 1325 aa9,68□□□□□ -0,86
Ubr4-201ENSMUST00000097822 Acin1Q9JIX8 1338 aaKnown RBP9,46□□□□□ -0,9
Ubr4-201ENSMUST00000097822 CenpbP27790 599 aa9,45□□□□□ -0,9
Ubr4-201ENSMUST00000097822 Zeb1Q64318 1117 aa9,43□□□□□ -0,9
Ubr4-201ENSMUST00000097822 Pelp1Q9DBD5 1123 aaKnown RBP9,4□□□□□ -0,91
Ubr4-201ENSMUST00000097822 Myt1Q8CFC2 1127 aa9,38□□□□□ -0,91
Ubr4-201ENSMUST00000097822 Pcgf6Q99NA9 353 aa9,38□□□□□ -0,91
Ubr4-201ENSMUST00000097822 Wdr66E9Q743 1299 aa9,37□□□□□ -0,91
Ubr4-201ENSMUST00000097822 Amer1Q7TS75 1132 aa9,26□□□□□ -0,93
Ubr4-201ENSMUST00000097822 DiexfQ8BTT6 772 aaKnown RBP9,24□□□□□ -0,93
Ubr4-201ENSMUST00000097822 Supt5hO55201 1082 aaKnown RBP9,1□□□□□ -0,95
Ubr4-201ENSMUST00000097822 Cdk11bP24788 784 aaKnown RBP9,05□□□□□ -0,96
Ubr4-201ENSMUST00000097822 Ttbk1Q6PCN3 1308 aa9,05□□□□□ -0,96
Ubr4-201ENSMUST00000097822 NefmP08553 848 aa9,04□□□□□ -0,96
Ubr4-201ENSMUST00000097822 Neurod1Q60867 357 aa8,98□□□□□ -0,97
Ubr4-201ENSMUST00000097822 Ccdc136Q3TVA9 1136 aa8,97□□□□□ -0,97
Ubr4-201ENSMUST00000097822 Nop58Q6DFW4 536 aaKnown RBP8,92□□□□□ -0,98
Ubr4-201ENSMUST00000097822 Gab3Q8BSM5 595 aa8,92□□□□□ -0,98
Ubr4-201ENSMUST00000097822 Trim41Q5NCC3 630 aa8,88□□□□□ -0,99
Ubr4-201ENSMUST00000097822 Tnnt3Q9QZ47 272 aa8,85□□□□□ -0,99
Ubr4-201ENSMUST00000097822 Csrnp3P59055 597 aa8,85□□□□□ -0,99
Ubr4-201ENSMUST00000097822 Stra8P70278 393 aa8,85□□□□□ -0,99
Ubr4-201ENSMUST00000097822 4933416C03RikQ3V063 378 aa8,83□□□□□ -1
Ubr4-201ENSMUST00000097822 Rtl5Q5DTT4 599 aa8,82□□□□□ -1
Ubr4-201ENSMUST00000097822 Slc24a1Q91WD8 1130 aa8,79□□□□□ -1
Ubr4-201ENSMUST00000097822 Gm38655A0A286YDK6 273 aa8,78□□□□□ -1
Ubr4-201ENSMUST00000097822 Ppargc1bQ8VHJ7 1014 aa8,78□□□□□ -1
Ubr4-201ENSMUST00000097822 UbtfP25976 765 aaKnown RBP8,77□□□□□ -1,01
Ubr4-201ENSMUST00000097822 Anks4bQ8K3X6 423 aa8,77□□□□□ -1,01
Ubr4-201ENSMUST00000097822 Ccdc180J3QNE4 1664 aa8,77□□□□□ -1,01
Ubr4-201ENSMUST00000097822 Aplp2Q06335 707 aa8,76□□□□□ -1,01
Ubr4-201ENSMUST00000097822 HrcG5E8J6 738 aa8,74□□□□□ -1,01
Ubr4-201ENSMUST00000097822 1700123L14RikQ3V2K7 440 aa8,73□□□□□ -1,01
Ubr4-201ENSMUST00000097822 4930567H17RikQ3V0K5 233 aa8,71□□□□□ -1,01
Ubr4-201ENSMUST00000097822 Bcl11aQ9QYE3 773 aa8,71□□□□□ -1,02
Ubr4-201ENSMUST00000097822 Ube2uB1AUC4 352 aa8,71□□□□□ -1,02
Ubr4-201ENSMUST00000097822 Anp32aO35381 247 aa8,68□□□□□ -1,02
Ubr4-201ENSMUST00000097822 Myt1lP97500 1187 aa8,64□□□□□ -1,03
Ubr4-201ENSMUST00000097822 Sall2Q9QX96 1004 aa8,63□□□□□ -1,03
Ubr4-201ENSMUST00000097822 Eif5bQ05D44 1216 aaKnown RBP8,6□□□□□ -1,03
Ubr4-201ENSMUST00000097822 Mier1Q5UAK0 511 aa8,6□□□□□ -1,03
Ubr4-201ENSMUST00000097822 Esf1Q3V1V3 845 aaKnown RBP8,59□□□□□ -1,03
Ubr4-201ENSMUST00000097822 ClspnQ80YR7 1315 aa8,58□□□□□ -1,04
Ubr4-201ENSMUST00000097822 Npm2Q80W85 207 aa8,56□□□□□ -1,04
Ubr4-201ENSMUST00000097822 DaxxO35613 739 aa8,55□□□□□ -1,04
Ubr4-201ENSMUST00000097822 TonslQ6NZL6 1363 aa8,54□□□□□ -1,04
Ubr4-201ENSMUST00000097822 Rtl1Q7M732 1744 aa8,54□□□□□ -1,04
Ubr4-201ENSMUST00000097822 Fam71e1A1L3C1 212 aa8,53□□□□□ -1,04
Ubr4-201ENSMUST00000097822 Mapk8ip2Q9ERE9 830 aa8,5□□□□□ -1,05
Ubr4-201ENSMUST00000097822 NrdcQ8BHG1 1161 aa8,5□□□□□ -1,05
Ubr4-201ENSMUST00000097822 NclP09405 707 aaKnown RBP8,49□□□□□ -1,05
Ubr4-201ENSMUST00000097822 NischQ80TM9 1593 aa8,47□□□□□ -1,05
Ubr4-201ENSMUST00000097822 NeflP08551 543 aa8,47□□□□□ -1,05
Ubr4-201ENSMUST00000097822 Dcaf1Q80TR8 1506 aa8,42□□□□□ -1,06
Ubr4-201ENSMUST00000097822 Ccdc9Q8VC31 543 aaKnown RBP8,42□□□□□ -1,06
Ubr4-201ENSMUST00000097822 Ppp4r2Q0VGB7 417 aa8,39□□□□□ -1,07
Ubr4-201ENSMUST00000097822 Calr4Q3TQS0 420 aa8,37□□□□□ -1,07
Ubr4-201ENSMUST00000097822 Ap3b1Q9Z1T1 1105 aa8,37□□□□□ -1,07
Ubr4-201ENSMUST00000097822 Hsp90aa1P07901 733 aaKnown RBP8,36□□□□□ -1,07
Ubr4-201ENSMUST00000097822 Anp32bQ9EST5 272 aaKnown RBP8,32□□□□□ -1,08
Ubr4-201ENSMUST00000097822 PrkcshO08795 521 aa8,31□□□□□ -1,08
Ubr4-201ENSMUST00000097822 Ythdc1E9Q5K9 736 aaKnown RBP8,31□□□□□ -1,08
Ubr4-201ENSMUST00000097822 Wdr43Q6ZQL4 677 aaKnown RBP8,29□□□□□ -1,08
Ubr4-201ENSMUST00000097822 Fam50aQ9WV03 339 aaKnown RBP8,29□□□□□ -1,08
Ubr4-201ENSMUST00000097822 Irx3P81067 507 aa8,28□□□□□ -1,08
Ubr4-201ENSMUST00000097822 Ccdc27Q3V036 639 aa8,27□□□□□ -1,08
Ubr4-201ENSMUST00000097822 SafbD3YXK2 937 aaKnown RBP8,27□□□□□ -1,09
Ubr4-201ENSMUST00000097822 Aebp2Q9Z248 504 aaKnown RBP8,27□□□□□ -1,09
Ubr4-201ENSMUST00000097822 Hnrnpul2Q00PI9 745 aaKnown RBP8,24□□□□□ -1,09
Ubr4-201ENSMUST00000097822 Eid3Q3V124 375 aa8,21□□□□□ -1,1
Ubr4-201ENSMUST00000097822 ArxO35085 564 aa8,2□□□□□ -1,1
Ubr4-201ENSMUST00000097822 Pknox2Q8BG99 474 aa8,2□□□□□ -1,1
Ubr4-201ENSMUST00000097822 Lmod3E9QA62 571 aa8,17□□□□□ -1,1
Ubr4-201ENSMUST00000097822 Upf2A2AT37 1269 aaKnown RBP8,15□□□□□ -1,1
Ubr4-201ENSMUST00000097822 Hdac5Q9Z2V6 1113 aa8,15□□□□□ -1,1
Ubr4-201ENSMUST00000097822 Plekhg3Q4VAC9 1341 aa8,14□□□□□ -1,11
Ubr4-201ENSMUST00000097822 Gtf3c3Q3TMP1 882 aa8,13□□□□□ -1,11
Ubr4-201ENSMUST00000097822 CanxP35564 591 aaKnown RBP8,13□□□□□ -1,11
Ubr4-201ENSMUST00000097822 Ifnlr1Q8CGK5 535 aa8,12□□□□□ -1,11
Ubr4-201ENSMUST00000097822 Taok2Q6ZQ29 1240 aa8,11□□□□□ -1,11
Ubr4-201ENSMUST00000097822 Zbtb7cQ8VCZ7 619 aa8,09□□□□□ -1,11
Ubr4-201ENSMUST00000097822 Supt16hQ920B9 1047 aa8,09□□□□□ -1,11
Ubr4-201ENSMUST00000097822 Trim44Q9QXA7 346 aa8,08□□□□□ -1,12
Ubr4-201ENSMUST00000097822 Mrs2Q5NCE8 434 aa8,06□□□□□ -1,12
Ubr4-201ENSMUST00000097822 AU015836B2RUM3 263 aa8,06□□□□□ -1,12
Ubr4-201ENSMUST00000097822 P3h3Q8CG70 732 aa8,06□□□□□ -1,12
Ubr4-201ENSMUST00000097822 CatipB9EKE5 520 aa8,05□□□□□ -1,12
Ubr4-201ENSMUST00000097822 Cep164Q5DU05 1446 aa8,05□□□□□ -1,12
Ubr4-201ENSMUST00000097822 DekQ7TNV0 380 aaKnown RBP8,03□□□□□ -1,12
Ubr4-201ENSMUST00000097822 Vsig10D3YX43 558 aa8,02□□□□□ -1,13
Ubr4-201ENSMUST00000097822 Nolc1E9Q5C9 702 aaKnown RBP8,01□□□□□ -1,13
Ubr4-201ENSMUST00000097822 Plcd4Q8K3R3 807 aa8,01□□□□□ -1,13
Ubr4-201ENSMUST00000097822 Il27Q8K3I6 234 aa8,01□□□□□ -1,13
Ubr4-201ENSMUST00000097822 Slc4a3P16283 1227 aa8□□□□□ -1,13
Ubr4-201ENSMUST00000097822 Tnnt2P50752 301 aa8□□□□□ -1,13
Ubr4-201ENSMUST00000097822 Zbtb4Q5F293 982 aa7,99□□□□□ -1,13
Retrieved 100 of 22,080 RNA–protein pairs in 21,6 ms