RNA–Protein interactions for RNA: ENSMUST00000092971.12

Chd3-201, Transcript of Chromodomain helicase DNA-binding protein 3, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Chd3, Length 6,066 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Chd3-201ENSMUST00000092971 Ptpn13Q64512 2453 aa10.22□□□□□ -0.77
Chd3-201ENSMUST00000092971 Setd2E9Q5F9 2537 aa10.22□□□□□ -0.77
Chd3-201ENSMUST00000092971 Rps28P62858 69 aaKnown RBP10.21□□□□□ -0.78
Chd3-201ENSMUST00000092971 Pcsk5Q04592 1877 aa10.2□□□□□ -0.78
Chd3-201ENSMUST00000092971 Gm20538F6Z9R1 75 aa10.18□□□□□ -0.78
Chd3-201ENSMUST00000092971 Krtap24-1G3X9A2 248 aa10.17□□□□□ -0.78
Chd3-201ENSMUST00000092971 Bahcc1Q3UHR0 2643 aa10.16□□□□□ -0.78
Chd3-201ENSMUST00000092971 Anapc11Q9CPX9 84 aa10.15□□□□□ -0.78
Chd3-201ENSMUST00000092971 Krtap11-1E9Q2E9 183 aa10.13□□□□□ -0.79
Chd3-201ENSMUST00000092971 MtorQ9JLN9 2549 aa10.13□□□□□ -0.79
Chd3-201ENSMUST00000092971 Gm10308Q9CVR5 141 aa10.12□□□□□ -0.79
Chd3-201ENSMUST00000092971 TrrapQ80YV3 2565 aaKnown RBP10.12□□□□□ -0.79
Chd3-201ENSMUST00000092971 Gm9573F7C950 1606 aa10.12□□□□□ -0.79
Chd3-201ENSMUST00000092971 Usp9yF8VPU6 2556 aa10.11□□□□□ -0.79
Chd3-201ENSMUST00000092971 Gm10772F7AIG4 85 aa10.11□□□□□ -0.79
Chd3-201ENSMUST00000092971 Col4a4Q9QZR9 1682 aa10.09□□□□□ -0.79
Chd3-201ENSMUST00000092971 Eif4ebp3Q80VV3 101 aa10.08□□□□□ -0.8
Chd3-201ENSMUST00000092971 A330070K13RikQ8CA53 115 aa10.05□□□□□ -0.8
Chd3-201ENSMUST00000092971 Phxr4P15974 95 aa10.05□□□□□ -0.8
Chd3-201ENSMUST00000092971 SetxA2AKX3 2646 aa10.01□□□□□ -0.81
Chd3-201ENSMUST00000092971 1810062G17RikG3X8Y2 129 aa9.99□□□□□ -0.81
Chd3-201ENSMUST00000092971 CriptO70333 101 aa9.99□□□□□ -0.81
Chd3-201ENSMUST00000092971 CicQ924A2 2510 aa9.98□□□□□ -0.81
Chd3-201ENSMUST00000092971 Cypt15B1AXS0 87 aa9.98□□□□□ -0.81
Chd3-201ENSMUST00000092971 Gm3880A0A1B0GSB3 72 aa9.97□□□□□ -0.81
Chd3-201ENSMUST00000092971 Plac8Q9JI48 112 aa9.97□□□□□ -0.81
Chd3-201ENSMUST00000092971 Gm3233E9Q2H5 230 aa9.96□□□□□ -0.81
Chd3-201ENSMUST00000092971 Epg5Q80TA9 2572 aa9.96□□□□□ -0.82
Chd3-201ENSMUST00000092971 Sprr4Q8CGN8 76 aa9.96□□□□□ -0.82
Chd3-201ENSMUST00000092971 Defb9Q8R2I6 67 aa9.96□□□□□ -0.82
Chd3-201ENSMUST00000092971 Uqcr11Q9CPX8 56 aa9.95□□□□□ -0.82
Chd3-201ENSMUST00000092971 Col27a1Q5QNQ9 1845 aa9.95□□□□□ -0.82
Chd3-201ENSMUST00000092971 Nbeal1E9PYP2 2688 aa9.95□□□□□ -0.82
Chd3-201ENSMUST00000092971 AY074887Q8R5F9 132 aa9.92□□□□□ -0.82
Chd3-201ENSMUST00000092971 Chtf8P0CG14 533 aa9.92□□□□□ -0.82
Chd3-201ENSMUST00000092971 Gm7276Q3TYW4 209 aa9.91□□□□□ -0.82
Chd3-201ENSMUST00000092971 Cep192E9Q4Y4 2514 aaKnown RBP9.91□□□□□ -0.82
Chd3-201ENSMUST00000092971 Fam229bQ8CF36 80 aa9.9□□□□□ -0.82
Chd3-201ENSMUST00000092971 Gm11213A0A1B0GR83 88 aa9.88□□□□□ -0.83
Chd3-201ENSMUST00000092971 Spink7Q6IE32 76 aa9.87□□□□□ -0.83
Chd3-201ENSMUST00000092971 Spata3Q9D9T6 193 aa9.86□□□□□ -0.83
Chd3-201ENSMUST00000092971 C530025M09RikF6RGA8 229 aa9.85□□□□□ -0.83
Chd3-201ENSMUST00000092971 Gm21798J3QNU5 87 aa9.84□□□□□ -0.83
Chd3-201ENSMUST00000092971 2310034C09RikQ9D746 214 aa9.84□□□□□ -0.83
Chd3-201ENSMUST00000092971 Sprr1bQ62267 153 aa9.84□□□□□ -0.83
Chd3-201ENSMUST00000092971 Col4a2P08122 1707 aa9.83□□□□□ -0.84
Chd3-201ENSMUST00000092971 Abca12E9Q876 2595 aa9.81□□□□□ -0.84
Chd3-201ENSMUST00000092971 Myo18bE9PV66 2605 aa9.79□□□□□ -0.84
Chd3-201ENSMUST00000092971 Golgb1E9PVZ8 3238 aa9.77□□□□□ -0.85
Chd3-201ENSMUST00000092971 Krtap26-1Q9D7N2 215 aa9.77□□□□□ -0.85
Chd3-201ENSMUST00000092971 Lypd5Q9D7Z7 256 aa9.76□□□□□ -0.85
Chd3-201ENSMUST00000092971 Unc79Q0KK59 2596 aa9.76□□□□□ -0.85
Chd3-201ENSMUST00000092971 Gm26620Q9CY65 116 aa9.76□□□□□ -0.85
Chd3-201ENSMUST00000092971 Psors1c2Q80ZC9 134 aa9.76□□□□□ -0.85
Chd3-201ENSMUST00000092971 Gm10643Q3URG9 111 aa9.74□□□□□ -0.85
Chd3-201ENSMUST00000092971 Dmbt1Q60997 2085 aa9.74□□□□□ -0.85
Chd3-201ENSMUST00000092971 Gm7138L7N2C3 230 aa9.73□□□□□ -0.85
Chd3-201ENSMUST00000092971 Gm3238W4VSP7 230 aa9.73□□□□□ -0.85
Chd3-201ENSMUST00000092971 Smim29Q8R043 75 aa9.73□□□□□ -0.85
Chd3-201ENSMUST00000092971 Gm7137J3QMW1 236 aa9.7□□□□□ -0.86
Chd3-201ENSMUST00000092971 Usp24B1AY13 2617 aaKnown RBP9.69□□□□□ -0.86
Chd3-201ENSMUST00000092971 AW011738F6S7Q2 159 aa9.68□□□□□ -0.86
Chd3-201ENSMUST00000092971 6030445D17RikE9Q8F9 148 aa9.68□□□□□ -0.86
Chd3-201ENSMUST00000092971 Col5a1O88207 1838 aa9.68□□□□□ -0.86
Chd3-201ENSMUST00000092971 Ankrd11E9Q4F7 2643 aa9.67□□□□□ -0.86
Chd3-201ENSMUST00000092971 CnbpP53996 178 aaKnown RBP9.65□□□□□ -0.86
Chd3-201ENSMUST00000092971 Gm9821Q8K076 103 aa9.65□□□□□ -0.86
Chd3-201ENSMUST00000092971 Gm9955Q8CEJ8 102 aa9.63□□□□□ -0.87
Chd3-201ENSMUST00000092971 FasnP19096 2504 aaKnown RBP9.62□□□□□ -0.87
Chd3-201ENSMUST00000092971 HrnrQ8VHD8 2496 aa9.61□□□□□ -0.87
Chd3-201ENSMUST00000092971 Gm4491E0CX42 125 aa9.6□□□□□ -0.87
Chd3-201ENSMUST00000092971 Nsd1O88491 2588 aaKnown RBP9.6□□□□□ -0.87
Chd3-201ENSMUST00000092971 Gm9508A0A1W2P7W0 230 aa9.59□□□□□ -0.87
Chd3-201ENSMUST00000092971 Zfp292Q9Z2U2 2698 aa9.58□□□□□ -0.88
Chd3-201ENSMUST00000092971 Fam104aA2A6P4 185 aa9.57□□□□□ -0.88
Chd3-201ENSMUST00000092971 Gm42715A0A087WP63 3095 aaKnown RBP9.55□□□□□ -0.88
Chd3-201ENSMUST00000092971 OxtP35454 125 aa9.54□□□□□ -0.88
Chd3-201ENSMUST00000092971 Zcchc13Q9D548 170 aa9.54□□□□□ -0.88
Chd3-201ENSMUST00000092971 Krtap15-1Q9QZU5 150 aa9.54□□□□□ -0.88
Chd3-201ENSMUST00000092971 Fn1P11276 2477 aaKnown RBP9.53□□□□□ -0.88
Chd3-201ENSMUST00000092971 Ep400Q8CHI8 3072 aaKnown RBP9.52□□□□□ -0.89
Chd3-201ENSMUST00000092971 Jbts17Q8CE72 3214 aa9.52□□□□□ -0.89
Chd3-201ENSMUST00000092971 Camk2n1Q6QWF9 78 aa9.49□□□□□ -0.89
Chd3-201ENSMUST00000092971 Cypt14J3QPF7 87 aa9.48□□□□□ -0.89
Chd3-201ENSMUST00000092971 Ankrd17Q99NH0 2603 aaKnown RBP9.46□□□□□ -0.89
Chd3-201ENSMUST00000092971 PcntP48725 2898 aa9.46□□□□□ -0.9
Chd3-201ENSMUST00000092971 Gm10320E9PW43 113 aa9.44□□□□□ -0.9
Chd3-201ENSMUST00000092971 FlnbQ80X90 2602 aaKnown RBP9.42□□□□□ -0.9
Chd3-201ENSMUST00000092971 NbdyA0A0N4SUI7 68 aa9.41□□□□□ -0.9
Chd3-201ENSMUST00000092971 AtrQ9JKK8 2635 aa9.41□□□□□ -0.9
Chd3-201ENSMUST00000092971 CenpfE9Q3P4 2997 aaKnown RBP9.41□□□□□ -0.9
Chd3-201ENSMUST00000092971 TrioQ0KL02 3102 aa9.39□□□□□ -0.91
Chd3-201ENSMUST00000092971 Prune2Q52KR3 3084 aa9.36□□□□□ -0.91
Chd3-201ENSMUST00000092971 Cystm1Q8K353 104 aa9.36□□□□□ -0.91
Chd3-201ENSMUST00000092971 Dnah12Q3V0Q1 3086 aa9.35□□□□□ -0.91
Chd3-201ENSMUST00000092971 Gcn1E9PVA8 2671 aaKnown RBP9.35□□□□□ -0.91
Chd3-201ENSMUST00000092971 Lelp1Q9DAE3 120 aa9.32□□□□□ -0.92
Chd3-201ENSMUST00000092971 Prrc2cQ3TLH4 2846 aaKnown RBP9.29□□□□□ -0.92
Chd3-201ENSMUST00000092971 Gm3646F6S692 53 aa9.28□□□□□ -0.92
Chd3-201ENSMUST00000092971 Notch1Q01705 2531 aa9.25□□□□□ -0.93
Retrieved 100 of 22,080 RNA–protein pairs in 67.4 ms