RNA–Protein interactions for RNA: ENSMUST00000090040.11

Ldb3-205, Transcript of LIM domain-binding protein 3, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ldb3, Length 4,981 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb3-205ENSMUST00000090040 Zfhx4Q9JJN2 3550 aa7.17□□□□□ -1.26
Ldb3-205ENSMUST00000090040 DspE9Q557 2883 aaKnown RBP7.16□□□□□ -1.26
Ldb3-205ENSMUST00000090040 Defb11Q8R2I7 77 aa7.16□□□□□ -1.26
Ldb3-205ENSMUST00000090040 E130208F15RikQ3UPV3 143 aa7.16□□□□□ -1.26
Ldb3-205ENSMUST00000090040 Ntn5Q3UQ22 452 aa7.16□□□□□ -1.26
Ldb3-205ENSMUST00000090040 Gm16485Q8C4B7 115 aa7.16□□□□□ -1.26
Ldb3-205ENSMUST00000090040 NipblQ6KCD5 2798 aaKnown RBP7.16□□□□□ -1.26
Ldb3-205ENSMUST00000090040 4930524J08RikQ9CUJ5 163 aa7.16□□□□□ -1.26
Ldb3-205ENSMUST00000090040 Wfdc12Q9JHY3 85 aa7.15□□□□□ -1.26
Ldb3-205ENSMUST00000090040 Zzef1Q5SSH7 2924 aa7.15□□□□□ -1.27
Ldb3-205ENSMUST00000090040 6430550D23RikE9Q1X6 194 aa7.14□□□□□ -1.27
Ldb3-205ENSMUST00000090040 Gm10845Q3UNY9 185 aa7.14□□□□□ -1.27
Ldb3-205ENSMUST00000090040 Snhg11Q4G0K9 87 aa7.14□□□□□ -1.27
Ldb3-205ENSMUST00000090040 Chchd10Q7TNL9 138 aa7.14□□□□□ -1.27
Ldb3-205ENSMUST00000090040 FlncQ8VHX6 2726 aaKnown RBP7.14□□□□□ -1.27
Ldb3-205ENSMUST00000090040 A0A286YCN5 57 aa7.13□□□□□ -1.27
Ldb3-205ENSMUST00000090040 Fam19a3Q7TPG6 132 aa7.13□□□□□ -1.27
Ldb3-205ENSMUST00000090040 Dmbt1Q60997 2085 aa7.13□□□□□ -1.27
Ldb3-205ENSMUST00000090040 TeppQ6IMH0 216 aa7.13□□□□□ -1.27
Ldb3-205ENSMUST00000090040 C130032M10RikQ8C888 123 aa7.12□□□□□ -1.27
Ldb3-205ENSMUST00000090040 Ighv2-5A0A0A6YY69 116 aa7.12□□□□□ -1.27
Ldb3-205ENSMUST00000090040 AW011738F6S7Q2 159 aa7.12□□□□□ -1.27
Ldb3-205ENSMUST00000090040 Gm5153P01627 120 aa7.12□□□□□ -1.27
Ldb3-205ENSMUST00000090040 Ighv1-56A0A0A6YXG2 117 aa7.11□□□□□ -1.27
Ldb3-205ENSMUST00000090040 Gm5142Q8C5X9 133 aa7.11□□□□□ -1.27
Ldb3-205ENSMUST00000090040 Dchs1E9PVD3 3291 aa7.11□□□□□ -1.27
Ldb3-205ENSMUST00000090040 PtprqP0C5E4 2300 aa7.1□□□□□ -1.27
Ldb3-205ENSMUST00000090040 Igkv8-19A0A0G2JFN8 121 aa7.08□□□□□ -1.28
Ldb3-205ENSMUST00000090040 Ighv2-2A0A075B5P8 116 aa7.08□□□□□ -1.28
Ldb3-205ENSMUST00000090040 P01821 116 aa7.08□□□□□ -1.28
Ldb3-205ENSMUST00000090040 Phxr5P08399 672 aa7.08□□□□□ -1.28
Ldb3-205ENSMUST00000090040 AplnQ9R0R4 77 aa7.08□□□□□ -1.28
Ldb3-205ENSMUST00000090040 Chd6A3KFM7 2711 aa7.08□□□□□ -1.28
Ldb3-205ENSMUST00000090040 Defb40Q70KL2 73 aa7.07□□□□□ -1.28
Ldb3-205ENSMUST00000090040 Sprr1bQ62267 153 aa7.07□□□□□ -1.28
Ldb3-205ENSMUST00000090040 Akap9Q70FJ1 3797 aa7.07□□□□□ -1.28
Ldb3-205ENSMUST00000090040 Gm9903Q8C9Y8 129 aa7.07□□□□□ -1.28
Ldb3-205ENSMUST00000090040 Csdc2Q91YQ3 154 aa7.07□□□□□ -1.28
Ldb3-205ENSMUST00000090040 Igkv3-7A0A0G2JE31 119 aa7.07□□□□□ -1.28
Ldb3-205ENSMUST00000090040 Stab1Q8R4Y4 2571 aa7.07□□□□□ -1.28
Ldb3-205ENSMUST00000090040 Akap13E9Q394 2776 aa7.07□□□□□ -1.28
Ldb3-205ENSMUST00000090040 Spink13Q3UTS8 97 aa7.06□□□□□ -1.28
Ldb3-205ENSMUST00000090040 Wfdc6bF6ULY1 148 aa7.06□□□□□ -1.28
Ldb3-205ENSMUST00000090040 Sostdc1Q9CQN4 206 aa7.06□□□□□ -1.28
Ldb3-205ENSMUST00000090040 Gm28374F6SG70 93 aa7.05□□□□□ -1.28
Ldb3-205ENSMUST00000090040 Ly6g6cQ9Z1Q4 126 aa7.05□□□□□ -1.28
Ldb3-205ENSMUST00000090040 PolqQ8CGS6 2544 aa7.05□□□□□ -1.28
Ldb3-205ENSMUST00000090040 9230102O04RikA2ASX7 82 aa7.05□□□□□ -1.28
Ldb3-205ENSMUST00000090040 Limd2Q8BGB5 128 aa7.05□□□□□ -1.28
Ldb3-205ENSMUST00000090040 A730009L09RikA0A1B0GS82 72 aa7.04□□□□□ -1.28
Ldb3-205ENSMUST00000090040 Nsd1O88491 2588 aaKnown RBP7.04□□□□□ -1.28
Ldb3-205ENSMUST00000090040 1810062G17RikG3X8Y2 129 aa7.03□□□□□ -1.28
Ldb3-205ENSMUST00000090040 Gm7138L7N2C3 230 aa7.03□□□□□ -1.28
Ldb3-205ENSMUST00000090040 Gm3238W4VSP7 230 aa7.03□□□□□ -1.28
Ldb3-205ENSMUST00000090040 Coa6Q8BGD8 79 aa7.03□□□□□ -1.28
Ldb3-205ENSMUST00000090040 4930535I16RikQ9CUI2 172 aa7.03□□□□□ -1.28
Ldb3-205ENSMUST00000090040 P01819 144 aa7.02□□□□□ -1.29
Ldb3-205ENSMUST00000090040 Gm10135F6TEE5 83 aa7.02□□□□□ -1.29
Ldb3-205ENSMUST00000090040 Rps28P62858 69 aaKnown RBP7.01□□□□□ -1.29
Ldb3-205ENSMUST00000090040 Krtap11-1E9Q2E9 183 aa7.01□□□□□ -1.29
Ldb3-205ENSMUST00000090040 Gm10837Q3UTT8 145 aa7.01□□□□□ -1.29
Ldb3-205ENSMUST00000090040 Defb50Q6TU36 73 aa7.01□□□□□ -1.29
Ldb3-205ENSMUST00000090040 Gm11627A6PWP4 55 aa7.01□□□□□ -1.29
Ldb3-205ENSMUST00000090040 Q9DAA7 145 aa7□□□□□ -1.29
Ldb3-205ENSMUST00000090040 Gm884A2A9H6 3643 aa7□□□□□ -1.29
Ldb3-205ENSMUST00000090040 4930519P11RikQ9CUJ8 166 aa6.99□□□□□ -1.29
Ldb3-205ENSMUST00000090040 Gm17606F6ZL36 78 aa6.98□□□□□ -1.29
Ldb3-205ENSMUST00000090040 Gm10267M0QWD8 85 aa6.98□□□□□ -1.29
Ldb3-205ENSMUST00000090040 Gm28230A0A0A0MQ91 144 aa6.98□□□□□ -1.29
Ldb3-205ENSMUST00000090040 ScxQ64124 207 aa6.98□□□□□ -1.29
Ldb3-205ENSMUST00000090040 Gm10570F6VB42 170 aa6.97□□□□□ -1.29
Ldb3-205ENSMUST00000090040 Wfdc13Q5DQQ6 81 aa6.97□□□□□ -1.29
Ldb3-205ENSMUST00000090040 Adm2Q7TNK8 150 aa6.97□□□□□ -1.29
Ldb3-205ENSMUST00000090040 Gm36176A0A1W2P8D5 158 aa6.94□□□□□ -1.3
Ldb3-205ENSMUST00000090040 Gm7137J3QMW1 236 aa6.94□□□□□ -1.3
Ldb3-205ENSMUST00000090040 Cox6a2P43023 97 aa6.94□□□□□ -1.3
Ldb3-205ENSMUST00000090040 Sprr4Q8CGN8 76 aa6.94□□□□□ -1.3
Ldb3-205ENSMUST00000090040 Gm10160F6Y577 67 aa6.93□□□□□ -1.3
Ldb3-205ENSMUST00000090040 9530053A07RikE9PVG8 2581 aa6.93□□□□□ -1.3
Ldb3-205ENSMUST00000090040 Itpr2Q9Z329 2701 aa6.93□□□□□ -1.3
Ldb3-205ENSMUST00000090040 4930518I15RikQ3V2W7 57 aa6.93□□□□□ -1.3
Ldb3-205ENSMUST00000090040 Msrb1Q9JLC3 116 aa6.93□□□□□ -1.3
Ldb3-205ENSMUST00000090040 Cd164Q9R0L9 197 aa6.93□□□□□ -1.3
Ldb3-205ENSMUST00000090040 Spint4Q9D263 159 aa6.92□□□□□ -1.3
Ldb3-205ENSMUST00000090040 Gm11213A0A1B0GR83 88 aa6.92□□□□□ -1.3
Ldb3-205ENSMUST00000090040 Gm12216A0A1W2P827 62 aa6.92□□□□□ -1.3
Ldb3-205ENSMUST00000090040 Notch1Q01705 2531 aa6.92□□□□□ -1.3
Ldb3-205ENSMUST00000090040 Celsr2Q9R0M0 2920 aa6.91□□□□□ -1.3
Ldb3-205ENSMUST00000090040 Dmac1Q9CQ00 111 aa6.91□□□□□ -1.3
Ldb3-205ENSMUST00000090040 Mrpl34Q99N91 92 aa6.9□□□□□ -1.3
Ldb3-205ENSMUST00000090040 Cdip1Q9DB75 208 aa6.9□□□□□ -1.3
Ldb3-205ENSMUST00000090040 Tenm3Q9WTS6 2715 aa6.9□□□□□ -1.3
Ldb3-205ENSMUST00000090040 Prol1E9PYQ4 312 aa6.9□□□□□ -1.31
Ldb3-205ENSMUST00000090040 Lama5Q61001 3718 aa6.9□□□□□ -1.31
Ldb3-205ENSMUST00000090040 Krtap16-1A2A5X5 502 aa6.9□□□□□ -1.31
Ldb3-205ENSMUST00000090040 Elof1P60003 83 aa6.9□□□□□ -1.31
Ldb3-205ENSMUST00000090040 Fn1P11276 2477 aaKnown RBP6.9□□□□□ -1.31
Ldb3-205ENSMUST00000090040 C530025M09RikF6RGA8 229 aa6.89□□□□□ -1.31
Ldb3-205ENSMUST00000090040 2310034G01RikA0A286YDL3 209 aa6.88□□□□□ -1.31
Ldb3-205ENSMUST00000090040 Reg3aO09037 175 aa6.88□□□□□ -1.31
Retrieved 100 of 22,080 RNA–protein pairs in 39.3 ms