RNA–Protein interactions for RNA: ENSMUST00000087883.12

Col3a1-201, Transcript of Collagen alpha-1(III) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col3a1, Length 5,564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col3a1-201ENSMUST00000087883 PtprqP0C5E4 2300 aa9.35□□□□□ -0.91
Col3a1-201ENSMUST00000087883 Krtap11-1E9Q2E9 183 aa9.35□□□□□ -0.91
Col3a1-201ENSMUST00000087883 Notch2O35516 2470 aa9.34□□□□□ -0.91
Col3a1-201ENSMUST00000087883 Tln1P26039 2541 aaKnown RBP9.34□□□□□ -0.91
Col3a1-201ENSMUST00000087883 Hivep3A2A884 2348 aa9.34□□□□□ -0.91
Col3a1-201ENSMUST00000087883 1810062G17RikG3X8Y2 129 aa9.32□□□□□ -0.92
Col3a1-201ENSMUST00000087883 AY074887Q8R5F9 132 aa9.29□□□□□ -0.92
Col3a1-201ENSMUST00000087883 A330070K13RikQ8CA53 115 aa9.29□□□□□ -0.92
Col3a1-201ENSMUST00000087883 Uqcr11Q9CPX8 56 aa9.28□□□□□ -0.92
Col3a1-201ENSMUST00000087883 Sprr4Q8CGN8 76 aa9.28□□□□□ -0.92
Col3a1-201ENSMUST00000087883 Gm10643Q3URG9 111 aa9.27□□□□□ -0.93
Col3a1-201ENSMUST00000087883 RetnlbQ99P86 105 aa9.27□□□□□ -0.93
Col3a1-201ENSMUST00000087883 Gm3250E9Q1M3 230 aa9.25□□□□□ -0.93
Col3a1-201ENSMUST00000087883 Defb11Q8R2I7 77 aa9.24□□□□□ -0.93
Col3a1-201ENSMUST00000087883 Rnase13Q5GAM7 153 aa9.21□□□□□ -0.94
Col3a1-201ENSMUST00000087883 Gm11213A0A1B0GR83 88 aa9.2□□□□□ -0.94
Col3a1-201ENSMUST00000087883 C530025M09RikF6RGA8 229 aa9.2□□□□□ -0.94
Col3a1-201ENSMUST00000087883 Gm7276Q3TYW4 209 aa9.19□□□□□ -0.94
Col3a1-201ENSMUST00000087883 Sprr1bQ62267 153 aa9.19□□□□□ -0.94
Col3a1-201ENSMUST00000087883 Fam229bQ8CF36 80 aa9.17□□□□□ -0.94
Col3a1-201ENSMUST00000087883 Usp9xP70398 2559 aaKnown RBP9.16□□□□□ -0.94
Col3a1-201ENSMUST00000087883 Sptbn4E9PX29 2561 aa9.15□□□□□ -0.94
Col3a1-201ENSMUST00000087883 Chtf8P0CG14 533 aa9.15□□□□□ -0.94
Col3a1-201ENSMUST00000087883 Cypt15B1AXS0 87 aa9.14□□□□□ -0.95
Col3a1-201ENSMUST00000087883 UtrnE9Q6R7 3430 aa9.13□□□□□ -0.95
Col3a1-201ENSMUST00000087883 Piezo1E2JF22 2547 aa9.13□□□□□ -0.95
Col3a1-201ENSMUST00000087883 PolqQ8CGS6 2544 aa9.12□□□□□ -0.95
Col3a1-201ENSMUST00000087883 Lypd5Q9D7Z7 256 aa9.1□□□□□ -0.95
Col3a1-201ENSMUST00000087883 CnbpP53996 178 aaKnown RBP9.1□□□□□ -0.95
Col3a1-201ENSMUST00000087883 Spata3Q9D9T6 193 aa9.09□□□□□ -0.95
Col3a1-201ENSMUST00000087883 Defb9Q8R2I6 67 aa9.08□□□□□ -0.96
Col3a1-201ENSMUST00000087883 Anapc11Q9CPX9 84 aa9.07□□□□□ -0.96
Col3a1-201ENSMUST00000087883 Gm20538F6Z9R1 75 aa9.06□□□□□ -0.96
Col3a1-201ENSMUST00000087883 Chd8Q09XV5 2582 aaKnown RBP9.06□□□□□ -0.96
Col3a1-201ENSMUST00000087883 Ep400Q8CHI8 3072 aaKnown RBP9.05□□□□□ -0.96
Col3a1-201ENSMUST00000087883 Cep192E9Q4Y4 2514 aaKnown RBP9.02□□□□□ -0.96
Col3a1-201ENSMUST00000087883 Gm21798J3QNU5 87 aa9.02□□□□□ -0.97
Col3a1-201ENSMUST00000087883 Gm42715A0A087WP63 3095 aaKnown RBP9.02□□□□□ -0.97
Col3a1-201ENSMUST00000087883 CriptO70333 101 aa9□□□□□ -0.97
Col3a1-201ENSMUST00000087883 Dnah12Q3V0Q1 3086 aa8.99□□□□□ -0.97
Col3a1-201ENSMUST00000087883 Ptpn13Q64512 2453 aa8.99□□□□□ -0.97
Col3a1-201ENSMUST00000087883 Fam104aA2A6P4 185 aa8.99□□□□□ -0.97
Col3a1-201ENSMUST00000087883 2310034C09RikQ9D746 214 aa8.98□□□□□ -0.97
Col3a1-201ENSMUST00000087883 SetxA2AKX3 2646 aa8.97□□□□□ -0.97
Col3a1-201ENSMUST00000087883 AW011738F6S7Q2 159 aa8.95□□□□□ -0.98
Col3a1-201ENSMUST00000087883 Zfp462B1AWL2 2495 aaKnown RBP8.95□□□□□ -0.98
Col3a1-201ENSMUST00000087883 Gm3880A0A1B0GSB3 72 aa8.95□□□□□ -0.98
Col3a1-201ENSMUST00000087883 Gm26620Q9CY65 116 aa8.94□□□□□ -0.98
Col3a1-201ENSMUST00000087883 Plac8Q9JI48 112 aa8.94□□□□□ -0.98
Col3a1-201ENSMUST00000087883 Smim29Q8R043 75 aa8.91□□□□□ -0.98
Col3a1-201ENSMUST00000087883 Setd2E9Q5F9 2537 aa8.91□□□□□ -0.98
Col3a1-201ENSMUST00000087883 CenpfE9Q3P4 2997 aaKnown RBP8.91□□□□□ -0.98
Col3a1-201ENSMUST00000087883 Pla2g10Q9QXX3 151 aa8.9□□□□□ -0.98
Col3a1-201ENSMUST00000087883 Zcchc13Q9D548 170 aa8.9□□□□□ -0.99
Col3a1-201ENSMUST00000087883 Cep350E9Q309 3095 aa8.9□□□□□ -0.99
Col3a1-201ENSMUST00000087883 TrrapQ80YV3 2565 aaKnown RBP8.89□□□□□ -0.99
Col3a1-201ENSMUST00000087883 MtorQ9JLN9 2549 aa8.89□□□□□ -0.99
Col3a1-201ENSMUST00000087883 Bahcc1Q3UHR0 2643 aa8.87□□□□□ -0.99
Col3a1-201ENSMUST00000087883 6030445D17RikE9Q8F9 148 aa8.86□□□□□ -0.99
Col3a1-201ENSMUST00000087883 PcntP48725 2898 aa8.86□□□□□ -0.99
Col3a1-201ENSMUST00000087883 Epg5Q80TA9 2572 aa8.85□□□□□ -0.99
Col3a1-201ENSMUST00000087883 Gm3233E9Q2H5 230 aa8.85□□□□□ -0.99
Col3a1-201ENSMUST00000087883 Gm9955Q8CEJ8 102 aa8.84□□□□□ -0.99
Col3a1-201ENSMUST00000087883 Cypt14J3QPF7 87 aa8.84□□□□□ -0.99
Col3a1-201ENSMUST00000087883 Gm10320E9PW43 113 aa8.83□□□□□ -1
Col3a1-201ENSMUST00000087883 Cystm1Q8K353 104 aa8.79□□□□□ -1
Col3a1-201ENSMUST00000087883 Usp34Q6ZQ93 3582 aa8.75□□□□□ -1.01
Col3a1-201ENSMUST00000087883 Gm4491E0CX42 125 aa8.74□□□□□ -1.01
Col3a1-201ENSMUST00000087883 Nbeal1E9PYP2 2688 aa8.74□□□□□ -1.01
Col3a1-201ENSMUST00000087883 NbdyA0A0N4SUI7 68 aa8.73□□□□□ -1.01
Col3a1-201ENSMUST00000087883 Lama3Q61789 3330 aa8.71□□□□□ -1.02
Col3a1-201ENSMUST00000087883 Dmbt1Q60997 2085 aa8.7□□□□□ -1.02
Col3a1-201ENSMUST00000087883 Gm3646F6S692 53 aa8.67□□□□□ -1.02
Col3a1-201ENSMUST00000087883 Gm7138L7N2C3 230 aa8.67□□□□□ -1.02
Col3a1-201ENSMUST00000087883 Gm3238W4VSP7 230 aa8.67□□□□□ -1.02
Col3a1-201ENSMUST00000087883 OxtP35454 125 aa8.66□□□□□ -1.02
Col3a1-201ENSMUST00000087883 Spink7Q6IE32 76 aa8.66□□□□□ -1.02
Col3a1-201ENSMUST00000087883 Gm9821Q8K076 103 aa8.65□□□□□ -1.02
Col3a1-201ENSMUST00000087883 Gm10065F6TJM2 114 aa8.65□□□□□ -1.02
Col3a1-201ENSMUST00000087883 Gm10139O88245 57 aa8.63□□□□□ -1.03
Col3a1-201ENSMUST00000087883 Abca12E9Q876 2595 aa8.62□□□□□ -1.03
Col3a1-201ENSMUST00000087883 TrioQ0KL02 3102 aa8.62□□□□□ -1.03
Col3a1-201ENSMUST00000087883 Lelp1Q9DAE3 120 aa8.6□□□□□ -1.03
Col3a1-201ENSMUST00000087883 Odf3bQ5M8M2 238 aa8.59□□□□□ -1.03
Col3a1-201ENSMUST00000087883 Gm37013Q8K491 104 aa8.59□□□□□ -1.03
Col3a1-201ENSMUST00000087883 Usp9yF8VPU6 2556 aa8.58□□□□□ -1.04
Col3a1-201ENSMUST00000087883 Unc79Q0KK59 2596 aa8.57□□□□□ -1.04
Col3a1-201ENSMUST00000087883 CicQ924A2 2510 aa8.56□□□□□ -1.04
Col3a1-201ENSMUST00000087883 Ankrd17Q99NH0 2603 aaKnown RBP8.56□□□□□ -1.04
Col3a1-201ENSMUST00000087883 A730071L15RikQ8C4X0 137 aa8.55□□□□□ -1.04
Col3a1-201ENSMUST00000087883 Gm7137J3QMW1 236 aa8.54□□□□□ -1.04
Col3a1-201ENSMUST00000087883 Zfp292Q9Z2U2 2698 aa8.54□□□□□ -1.04
Col3a1-201ENSMUST00000087883 HttP42859 3119 aa8.53□□□□□ -1.04
Col3a1-201ENSMUST00000087883 Sprr1aQ62266 144 aa8.51□□□□□ -1.05
Col3a1-201ENSMUST00000087883 Gm9508A0A1W2P7W0 230 aa8.5□□□□□ -1.05
Col3a1-201ENSMUST00000087883 Krtap15-1Q9QZU5 150 aa8.47□□□□□ -1.05
Col3a1-201ENSMUST00000087883 Tnrc18Q80WC3 2878 aa8.47□□□□□ -1.05
Col3a1-201ENSMUST00000087883 Nsd1O88491 2588 aaKnown RBP8.47□□□□□ -1.05
Col3a1-201ENSMUST00000087883 Myo18bE9PV66 2605 aa8.47□□□□□ -1.05
Col3a1-201ENSMUST00000087883 Gm16253D3Z167 63 aa8.46□□□□□ -1.06
Retrieved 100 of 22,080 RNA–protein pairs in 67.6 ms