RNA–Protein interactions for RNA: ENSMUST00000086923.5

Col17a1-202, Transcript of Collagen alpha-1(XVII) chain, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Col17a1, Length 5,477 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1-202ENSMUST00000086923 Psors1c2Q80ZC9 134 aa10,97□□□□□ -0,65
Col17a1-202ENSMUST00000086923 1600014C23RikQ9DAX4 101 aa10,96□□□□□ -0,65
Col17a1-202ENSMUST00000086923 E130208F15RikQ3UPV3 143 aa10,93□□□□□ -0,66
Col17a1-202ENSMUST00000086923 Usp9xP70398 2559 aaKnown RBP10,93□□□□□ -0,66
Col17a1-202ENSMUST00000086923 Prol1E9PYQ4 312 aa10,92□□□□□ -0,66
Col17a1-202ENSMUST00000086923 Gm3646F6S692 53 aa10,91□□□□□ -0,66
Col17a1-202ENSMUST00000086923 Gm7276Q3TYW4 209 aa10,91□□□□□ -0,66
Col17a1-202ENSMUST00000086923 Pla2g10Q9QXX3 151 aa10,91□□□□□ -0,66
Col17a1-202ENSMUST00000086923 1700042G07RikB1AUF7 90 aa10,88□□□□□ -0,67
Col17a1-202ENSMUST00000086923 Defb10Q8R2I8 73 aa10,87□□□□□ -0,67
Col17a1-202ENSMUST00000086923 C530025M09RikF6RGA8 229 aa10,86□□□□□ -0,67
Col17a1-202ENSMUST00000086923 Gm9821Q8K076 103 aa10,86□□□□□ -0,67
Col17a1-202ENSMUST00000086923 Defb2P82020 71 aa10,86□□□□□ -0,67
Col17a1-202ENSMUST00000086923 Phf5aP83870 110 aaKnown RBP10,86□□□□□ -0,67
Col17a1-202ENSMUST00000086923 Col5a1O88207 1838 aa10,85□□□□□ -0,67
Col17a1-202ENSMUST00000086923 Fam168bQ80XQ8 194 aa10,85□□□□□ -0,67
Col17a1-202ENSMUST00000086923 Sprr1bQ62267 153 aa10,84□□□□□ -0,67
Col17a1-202ENSMUST00000086923 Snhg11Q4G0K9 87 aa10,84□□□□□ -0,67
Col17a1-202ENSMUST00000086923 Setd2E9Q5F9 2537 aa10,83□□□□□ -0,68
Col17a1-202ENSMUST00000086923 Krtap11-1E9Q2E9 183 aa10,83□□□□□ -0,68
Col17a1-202ENSMUST00000086923 Piezo1E2JF22 2547 aa10,82□□□□□ -0,68
Col17a1-202ENSMUST00000086923 Lrrk2Q5S006 2527 aa10,81□□□□□ -0,68
Col17a1-202ENSMUST00000086923 Notch2O35516 2470 aa10,81□□□□□ -0,68
Col17a1-202ENSMUST00000086923 Col27a1Q5QNQ9 1845 aa10,8□□□□□ -0,68
Col17a1-202ENSMUST00000086923 Sprr4Q8CGN8 76 aa10,79□□□□□ -0,68
Col17a1-202ENSMUST00000086923 Cep192E9Q4Y4 2514 aaKnown RBP10,78□□□□□ -0,68
Col17a1-202ENSMUST00000086923 Spata3Q9D9T6 193 aa10,77□□□□□ -0,69
Col17a1-202ENSMUST00000086923 Spaca4Q80ZQ0 127 aa10,76□□□□□ -0,69
Col17a1-202ENSMUST00000086923 Lypd5Q9D7Z7 256 aa10,75□□□□□ -0,69
Col17a1-202ENSMUST00000086923 Smim29Q8R043 75 aa10,75□□□□□ -0,69
Col17a1-202ENSMUST00000086923 Nbeal1E9PYP2 2688 aa10,75□□□□□ -0,69
Col17a1-202ENSMUST00000086923 Gm27235Q3UW50 83 aa10,75□□□□□ -0,69
Col17a1-202ENSMUST00000086923 Gm3880A0A1B0GSB3 72 aa10,74□□□□□ -0,69
Col17a1-202ENSMUST00000086923 Gm21798J3QNU5 87 aa10,74□□□□□ -0,69
Col17a1-202ENSMUST00000086923 4933415A04RikQ9D443 101 aa10,73□□□□□ -0,69
Col17a1-202ENSMUST00000086923 Srsf12Q8C8K3 266 aa10,72□□□□□ -0,69
Col17a1-202ENSMUST00000086923 CriptO70333 101 aa10,71□□□□□ -0,69
Col17a1-202ENSMUST00000086923 Gm20538F6Z9R1 75 aa10,71□□□□□ -0,69
Col17a1-202ENSMUST00000086923 Gpr15lA0A0B4J1N3 78 aa10,71□□□□□ -0,69
Col17a1-202ENSMUST00000086923 Gm16181B0V2H2 73 aa10,69□□□□□ -0,7
Col17a1-202ENSMUST00000086923 Cypt14J3QPF7 87 aa10,68□□□□□ -0,7
Col17a1-202ENSMUST00000086923 Ptpn13Q64512 2453 aa10,68□□□□□ -0,7
Col17a1-202ENSMUST00000086923 Gm10320E9PW43 113 aa10,67□□□□□ -0,7
Col17a1-202ENSMUST00000086923 Zcchc13Q9D548 170 aa10,67□□□□□ -0,7
Col17a1-202ENSMUST00000086923 Ep400Q8CHI8 3072 aaKnown RBP10,65□□□□□ -0,7
Col17a1-202ENSMUST00000086923 UtrnE9Q6R7 3430 aa10,64□□□□□ -0,71
Col17a1-202ENSMUST00000086923 Gm42715A0A087WP63 3095 aaKnown RBP10,63□□□□□ -0,71
Col17a1-202ENSMUST00000086923 2310034C09RikQ9D746 214 aa10,61□□□□□ -0,71
Col17a1-202ENSMUST00000086923 Col4a2P08122 1707 aa10,61□□□□□ -0,71
Col17a1-202ENSMUST00000086923 Ly6g6cQ9Z1Q4 126 aa10,61□□□□□ -0,71
Col17a1-202ENSMUST00000086923 Sptbn4E9PX29 2561 aa10,59□□□□□ -0,71
Col17a1-202ENSMUST00000086923 Epg5Q80TA9 2572 aa10,57□□□□□ -0,72
Col17a1-202ENSMUST00000086923 MtorQ9JLN9 2549 aa10,54□□□□□ -0,72
Col17a1-202ENSMUST00000086923 Defb11Q8R2I7 77 aa10,53□□□□□ -0,72
Col17a1-202ENSMUST00000086923 6030445D17RikE9Q8F9 148 aa10,51□□□□□ -0,73
Col17a1-202ENSMUST00000086923 PcntP48725 2898 aa10,48□□□□□ -0,73
Col17a1-202ENSMUST00000086923 Fam104aA2A6P4 185 aa10,47□□□□□ -0,73
Col17a1-202ENSMUST00000086923 SetxA2AKX3 2646 aa10,46□□□□□ -0,73
Col17a1-202ENSMUST00000086923 A730071L15RikQ8C4X0 137 aa10,46□□□□□ -0,73
Col17a1-202ENSMUST00000086923 Usp9yF8VPU6 2556 aa10,44□□□□□ -0,74
Col17a1-202ENSMUST00000086923 Gm9955Q8CEJ8 102 aa10,41□□□□□ -0,74
Col17a1-202ENSMUST00000086923 Bahcc1Q3UHR0 2643 aa10,41□□□□□ -0,74
Col17a1-202ENSMUST00000086923 Anapc11Q9CPX9 84 aa10,4□□□□□ -0,74
Col17a1-202ENSMUST00000086923 Gm37013Q8K491 104 aa10,39□□□□□ -0,75
Col17a1-202ENSMUST00000086923 Krtap24-1G3X9A2 248 aa10,39□□□□□ -0,75
Col17a1-202ENSMUST00000086923 Chd8Q09XV5 2582 aaKnown RBP10,38□□□□□ -0,75
Col17a1-202ENSMUST00000086923 HrnrQ8VHD8 2496 aa10,37□□□□□ -0,75
Col17a1-202ENSMUST00000086923 Gm3285A0A1W2P7U0 201 aa10,35□□□□□ -0,75
Col17a1-202ENSMUST00000086923 Defb9Q8R2I6 67 aa10,35□□□□□ -0,75
Col17a1-202ENSMUST00000086923 Cep350E9Q309 3095 aa10,29□□□□□ -0,76
Col17a1-202ENSMUST00000086923 Odf3bQ5M8M2 238 aa10,28□□□□□ -0,76
Col17a1-202ENSMUST00000086923 Dnah12Q3V0Q1 3086 aa10,27□□□□□ -0,77
Col17a1-202ENSMUST00000086923 Lama2Q60675 3118 aaKnown RBP10,24□□□□□ -0,77
Col17a1-202ENSMUST00000086923 TrioQ0KL02 3102 aa10,23□□□□□ -0,77
Col17a1-202ENSMUST00000086923 AW011738F6S7Q2 159 aa10,21□□□□□ -0,78
Col17a1-202ENSMUST00000086923 TrrapQ80YV3 2565 aaKnown RBP10,19□□□□□ -0,78
Col17a1-202ENSMUST00000086923 Gm4491E0CX42 125 aa10,17□□□□□ -0,78
Col17a1-202ENSMUST00000086923 Romo1P60603 79 aa10,16□□□□□ -0,78
Col17a1-202ENSMUST00000086923 Myo18bE9PV66 2605 aa10,15□□□□□ -0,79
Col17a1-202ENSMUST00000086923 Ankrd17Q99NH0 2603 aaKnown RBP10,14□□□□□ -0,79
Col17a1-202ENSMUST00000086923 Gm3250E9Q1M3 230 aa10,14□□□□□ -0,79
Col17a1-202ENSMUST00000086923 Lama3Q61789 3330 aa10,13□□□□□ -0,79
Col17a1-202ENSMUST00000086923 Prrc2cQ3TLH4 2846 aaKnown RBP10,12□□□□□ -0,79
Col17a1-202ENSMUST00000086923 CenpfE9Q3P4 2997 aaKnown RBP10,1□□□□□ -0,79
Col17a1-202ENSMUST00000086923 Usp34Q6ZQ93 3582 aa10,09□□□□□ -0,79
Col17a1-202ENSMUST00000086923 Gm10139O88245 57 aa10,09□□□□□ -0,79
Col17a1-202ENSMUST00000086923 Abca12E9Q876 2595 aa10,06□□□□□ -0,8
Col17a1-202ENSMUST00000086923 Unc79Q0KK59 2596 aa10,04□□□□□ -0,8
Col17a1-202ENSMUST00000086923 Rpl37Q9D823 97 aa10,03□□□□□ -0,8
Col17a1-202ENSMUST00000086923 Ndufaf8A2AMZ4 74 aa10,02□□□□□ -0,81
Col17a1-202ENSMUST00000086923 Gcn1E9PVA8 2671 aaKnown RBP10,01□□□□□ -0,81
Col17a1-202ENSMUST00000086923 Gm10382Q3V0T5 144 aa10,01□□□□□ -0,81
Col17a1-202ENSMUST00000086923 Plac8Q9JI48 112 aa10□□□□□ -0,81
Col17a1-202ENSMUST00000086923 Kmt2bO08550 2713 aa9,99□□□□□ -0,81
Col17a1-202ENSMUST00000086923 Fn1P11276 2477 aaKnown RBP9,97□□□□□ -0,81
Col17a1-202ENSMUST00000086923 FasnP19096 2504 aaKnown RBP9,97□□□□□ -0,81
Col17a1-202ENSMUST00000086923 OxtP35454 125 aa9,93□□□□□ -0,82
Col17a1-202ENSMUST00000086923 NbdyA0A0N4SUI7 68 aa9,91□□□□□ -0,82
Col17a1-202ENSMUST00000086923 Nsd1O88491 2588 aaKnown RBP9,9□□□□□ -0,82
Col17a1-202ENSMUST00000086923 Gm16253D3Z167 63 aa9,9□□□□□ -0,83
Retrieved 100 of 22,080 RNA–protein pairs in 39,5 ms