RNA–Protein interactions for RNA: ENSMUST00000086923.5

Col17a1-202, Transcript of Collagen alpha-1(XVII) chain, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Col17a1, Length 5,477 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1-202ENSMUST00000086923 Rpgrip1Q9EPQ2 1331 aa27,83■■■□□ 2,04
Col17a1-202ENSMUST00000086923 Rhox8Q6VSS7 320 aa27,53■■■□□ 2
Col17a1-202ENSMUST00000086923 Las1lA2BE28 776 aaKnown RBP27,22■■□□□ 1,95
Col17a1-202ENSMUST00000086923 Cngb1E1AZ71 1325 aa26,79■■□□□ 1,88
Col17a1-202ENSMUST00000086923 Ehmt2Q9Z148 1263 aaKnown RBP26,42■■□□□ 1,82
Col17a1-202ENSMUST00000086923 Pelp1Q9DBD5 1123 aaKnown RBP26,08■■□□□ 1,77
Col17a1-202ENSMUST00000086923 CenpbP27790 599 aa25,87■■□□□ 1,73
Col17a1-202ENSMUST00000086923 Wdr66E9Q743 1299 aa25,72■■□□□ 1,71
Col17a1-202ENSMUST00000086923 Myt1Q8CFC2 1127 aa25,67■■□□□ 1,7
Col17a1-202ENSMUST00000086923 Zeb1Q64318 1117 aa25,66■■□□□ 1,7
Col17a1-202ENSMUST00000086923 Amer1Q7TS75 1132 aa25,66■■□□□ 1,7
Col17a1-202ENSMUST00000086923 Acin1Q9JIX8 1338 aaKnown RBP25,46■■□□□ 1,67
Col17a1-202ENSMUST00000086923 Pcgf6Q99NA9 353 aa25,2■■□□□ 1,62
Col17a1-202ENSMUST00000086923 DiexfQ8BTT6 772 aaKnown RBP25,16■■□□□ 1,62
Col17a1-202ENSMUST00000086923 Ttbk1Q6PCN3 1308 aa24,84■■□□□ 1,57
Col17a1-202ENSMUST00000086923 Cdk11bP24788 784 aaKnown RBP24,62■■□□□ 1,53
Col17a1-202ENSMUST00000086923 NefmP08553 848 aa24,61■■□□□ 1,53
Col17a1-202ENSMUST00000086923 Supt5hO55201 1082 aaKnown RBP24,42■■□□□ 1,5
Col17a1-202ENSMUST00000086923 4930567H17RikQ3V0K5 233 aa24,42■■□□□ 1,5
Col17a1-202ENSMUST00000086923 4933416C03RikQ3V063 378 aa24,4■■□□□ 1,5
Col17a1-202ENSMUST00000086923 Stra8P70278 393 aa24,39■■□□□ 1,5
Col17a1-202ENSMUST00000086923 Ccdc136Q3TVA9 1136 aa24,31■■□□□ 1,48
Col17a1-202ENSMUST00000086923 Gab3Q8BSM5 595 aa24,28■■□□□ 1,48
Col17a1-202ENSMUST00000086923 Nop58Q6DFW4 536 aaKnown RBP24,27■■□□□ 1,48
Col17a1-202ENSMUST00000086923 Tnnt3Q9QZ47 272 aa24,21■■□□□ 1,47
Col17a1-202ENSMUST00000086923 Rtl5Q5DTT4 599 aa24,19■■□□□ 1,46
Col17a1-202ENSMUST00000086923 Trim41Q5NCC3 630 aa24,13■■□□□ 1,45
Col17a1-202ENSMUST00000086923 Ube2uB1AUC4 352 aa24,1■■□□□ 1,45
Col17a1-202ENSMUST00000086923 Slc24a1Q91WD8 1130 aa24,09■■□□□ 1,45
Col17a1-202ENSMUST00000086923 Neurod1Q60867 357 aa24,04■■□□□ 1,44
Col17a1-202ENSMUST00000086923 HrcG5E8J6 738 aa23,87■■□□□ 1,41
Col17a1-202ENSMUST00000086923 UbtfP25976 765 aaKnown RBP23,85■■□□□ 1,41
Col17a1-202ENSMUST00000086923 Csrnp3P59055 597 aa23,78■■□□□ 1,4
Col17a1-202ENSMUST00000086923 Ppargc1bQ8VHJ7 1014 aa23,76■■□□□ 1,39
Col17a1-202ENSMUST00000086923 Gm38655A0A286YDK6 273 aa23,69■■□□□ 1,38
Col17a1-202ENSMUST00000086923 Aplp2Q06335 707 aa23,67■■□□□ 1,38
Col17a1-202ENSMUST00000086923 Anp32aO35381 247 aa23,66■■□□□ 1,38
Col17a1-202ENSMUST00000086923 Anks4bQ8K3X6 423 aa23,63■■□□□ 1,37
Col17a1-202ENSMUST00000086923 Myt1lP97500 1187 aa23,62■■□□□ 1,37
Col17a1-202ENSMUST00000086923 Ccdc180J3QNE4 1664 aa23,59■■□□□ 1,37
Col17a1-202ENSMUST00000086923 Esf1Q3V1V3 845 aaKnown RBP23,58■■□□□ 1,37
Col17a1-202ENSMUST00000086923 Eif5bQ05D44 1216 aaKnown RBP23,54■■□□□ 1,36
Col17a1-202ENSMUST00000086923 Npm2Q80W85 207 aa23,51■■□□□ 1,35
Col17a1-202ENSMUST00000086923 DaxxO35613 739 aa23,49■■□□□ 1,35
Col17a1-202ENSMUST00000086923 Bcl11aQ9QYE3 773 aa23,44■■□□□ 1,34
Col17a1-202ENSMUST00000086923 1700123L14RikQ3V2K7 440 aa23,39■■□□□ 1,33
Col17a1-202ENSMUST00000086923 NrdcQ8BHG1 1161 aa23,38■■□□□ 1,33
Col17a1-202ENSMUST00000086923 NeflP08551 543 aa23,38■■□□□ 1,33
Col17a1-202ENSMUST00000086923 ClspnQ80YR7 1315 aa23,24■■□□□ 1,31
Col17a1-202ENSMUST00000086923 TonslQ6NZL6 1363 aa23,22■■□□□ 1,31
Col17a1-202ENSMUST00000086923 Sall2Q9QX96 1004 aa23,19■■□□□ 1,3
Col17a1-202ENSMUST00000086923 NclP09405 707 aaKnown RBP23,15■■□□□ 1,3
Col17a1-202ENSMUST00000086923 Mier1Q5UAK0 511 aa23,14■■□□□ 1,29
Col17a1-202ENSMUST00000086923 Ythdc1E9Q5K9 736 aaKnown RBP23,07■■□□□ 1,28
Col17a1-202ENSMUST00000086923 Ccdc9Q8VC31 543 aaKnown RBP23,01■■□□□ 1,27
Col17a1-202ENSMUST00000086923 NischQ80TM9 1593 aa22,99■■□□□ 1,27
Col17a1-202ENSMUST00000086923 Rtl1Q7M732 1744 aa22,99■■□□□ 1,27
Col17a1-202ENSMUST00000086923 Fam71e1A1L3C1 212 aa22,97■■□□□ 1,27
Col17a1-202ENSMUST00000086923 Anp32bQ9EST5 272 aaKnown RBP22,94■■□□□ 1,26
Col17a1-202ENSMUST00000086923 Mapk8ip2Q9ERE9 830 aa22,93■■□□□ 1,26
Col17a1-202ENSMUST00000086923 Hsp90aa1P07901 733 aaKnown RBP22,85■■□□□ 1,25
Col17a1-202ENSMUST00000086923 Ppp4r2Q0VGB7 417 aa22,76■■□□□ 1,23
Col17a1-202ENSMUST00000086923 Calr4Q3TQS0 420 aa22,75■■□□□ 1,23
Col17a1-202ENSMUST00000086923 Fam50aQ9WV03 339 aaKnown RBP22,68■■□□□ 1,22
Col17a1-202ENSMUST00000086923 Ap3b1Q9Z1T1 1105 aa22,62■■□□□ 1,21
Col17a1-202ENSMUST00000086923 Wdr43Q6ZQL4 677 aaKnown RBP22,59■■□□□ 1,21
Col17a1-202ENSMUST00000086923 Lmod3E9QA62 571 aa22,54■■□□□ 1,2
Col17a1-202ENSMUST00000086923 Irx3P81067 507 aa22,53■■□□□ 1,2
Col17a1-202ENSMUST00000086923 Dcaf1Q80TR8 1506 aa22,51■■□□□ 1,19
Col17a1-202ENSMUST00000086923 Ccdc27Q3V036 639 aa22,51■■□□□ 1,19
Col17a1-202ENSMUST00000086923 ArxO35085 564 aa22,5■■□□□ 1,19
Col17a1-202ENSMUST00000086923 CatipB9EKE5 520 aa22,4■■□□□ 1,18
Col17a1-202ENSMUST00000086923 PrkcshO08795 521 aa22,31■■□□□ 1,16
Col17a1-202ENSMUST00000086923 Upf2A2AT37 1269 aaKnown RBP22,27■■□□□ 1,16
Col17a1-202ENSMUST00000086923 Trim44Q9QXA7 346 aa22,24■■□□□ 1,15
Col17a1-202ENSMUST00000086923 Pknox2Q8BG99 474 aa22,23■■□□□ 1,15
Col17a1-202ENSMUST00000086923 SafbD3YXK2 937 aaKnown RBP22,19■■□□□ 1,14
Col17a1-202ENSMUST00000086923 CanxP35564 591 aaKnown RBP22,17■■□□□ 1,14
Col17a1-202ENSMUST00000086923 Eid3Q3V124 375 aa22,15■■□□□ 1,14
Col17a1-202ENSMUST00000086923 Hnrnpul2Q00PI9 745 aaKnown RBP22,11■■□□□ 1,13
Col17a1-202ENSMUST00000086923 Aebp2Q9Z248 504 aaKnown RBP22,09■■□□□ 1,13
Col17a1-202ENSMUST00000086923 Taok2Q6ZQ29 1240 aa22,06■■□□□ 1,12
Col17a1-202ENSMUST00000086923 Zbtb7cQ8VCZ7 619 aa22,04■■□□□ 1,12
Col17a1-202ENSMUST00000086923 Gtf3c3Q3TMP1 882 aa22,03■■□□□ 1,12
Col17a1-202ENSMUST00000086923 Plekhg3Q4VAC9 1341 aa22,03■■□□□ 1,12
Col17a1-202ENSMUST00000086923 Tnnt2P50752 301 aa22,03■■□□□ 1,12
Col17a1-202ENSMUST00000086923 DekQ7TNV0 380 aaKnown RBP22,03■■□□□ 1,12
Col17a1-202ENSMUST00000086923 AU015836B2RUM3 263 aa22,02■■□□□ 1,12
Col17a1-202ENSMUST00000086923 Os9Q8K2C7 672 aa22■■□□□ 1,11
Col17a1-202ENSMUST00000086923 Vsig10D3YX43 558 aa21,97■■□□□ 1,11
Col17a1-202ENSMUST00000086923 Hdac5Q9Z2V6 1113 aa21,96■■□□□ 1,11
Col17a1-202ENSMUST00000086923 Mrs2Q5NCE8 434 aa21,92■■□□□ 1,1
Col17a1-202ENSMUST00000086923 Il27Q8K3I6 234 aa21,9■■□□□ 1,1
Col17a1-202ENSMUST00000086923 Polr3glQ8R0C0 218 aa21,88■■□□□ 1,09
Col17a1-202ENSMUST00000086923 Htatsf1Q8BGC0 757 aa21,86■■□□□ 1,09
Col17a1-202ENSMUST00000086923 Hsp90ab1P11499 724 aaKnown RBP21,85■■□□□ 1,09
Col17a1-202ENSMUST00000086923 P3h3Q8CG70 732 aa21,78■■□□□ 1,08
Col17a1-202ENSMUST00000086923 Trim30dE9PWL0 497 aa21,76■■□□□ 1,07
Col17a1-202ENSMUST00000086923 Supt16hQ920B9 1047 aa21,76■■□□□ 1,07
Col17a1-202ENSMUST00000086923 PtmaP26350 111 aa21,74■■□□□ 1,07
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