RNA–Protein interactions for RNA: ENSMUST00000050078.12

Sdf4-201, Transcript of 45 kDa calcium-binding protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sdf4, Length 5,177 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sdf4-201ENSMUST00000050078 P01819 144 aa8.57□□□□□ -1.04
Sdf4-201ENSMUST00000050078 Unc80Q8BLN6 3261 aa8.57□□□□□ -1.04
Sdf4-201ENSMUST00000050078 Sec61gP60060 68 aa8.56□□□□□ -1.04
Sdf4-201ENSMUST00000050078 Defb10Q8R2I8 73 aa8.56□□□□□ -1.04
Sdf4-201ENSMUST00000050078 1600014C23RikQ9DAX4 101 aa8.56□□□□□ -1.04
Sdf4-201ENSMUST00000050078 Gm10570F6VB42 170 aa8.56□□□□□ -1.04
Sdf4-201ENSMUST00000050078 Gm28230A0A0A0MQ91 144 aa8.56□□□□□ -1.04
Sdf4-201ENSMUST00000050078 P84750 121 aa8.55□□□□□ -1.04
Sdf4-201ENSMUST00000050078 Adm2Q7TNK8 150 aa8.55□□□□□ -1.04
Sdf4-201ENSMUST00000050078 Cox6a2P43023 97 aa8.54□□□□□ -1.04
Sdf4-201ENSMUST00000050078 Znf706Q9D115 76 aaKnown RBP8.54□□□□□ -1.04
Sdf4-201ENSMUST00000050078 Ly6g6cQ9Z1Q4 126 aa8.54□□□□□ -1.04
Sdf4-201ENSMUST00000050078 6430550D23RikE9Q1X6 194 aa8.53□□□□□ -1.04
Sdf4-201ENSMUST00000050078 Ndufb1P0DN34 57 aa8.53□□□□□ -1.04
Sdf4-201ENSMUST00000050078 Coa6Q8BGD8 79 aa8.53□□□□□ -1.04
Sdf4-201ENSMUST00000050078 Dmbt1Q60997 2085 aa8.53□□□□□ -1.04
Sdf4-201ENSMUST00000050078 Gm26661M0QWV4 156 aa8.53□□□□□ -1.04
Sdf4-201ENSMUST00000050078 Mrpl34Q99N91 92 aa8.52□□□□□ -1.05
Sdf4-201ENSMUST00000050078 Gm9195A0A140LHT4 2805 aa8.52□□□□□ -1.05
Sdf4-201ENSMUST00000050078 Prr13Q9CQJ5 137 aa8.52□□□□□ -1.05
Sdf4-201ENSMUST00000050078 1700018G05RikA0A1B0GSI2 66 aa8.52□□□□□ -1.05
Sdf4-201ENSMUST00000050078 Ighv2-5A0A0A6YY69 116 aa8.5□□□□□ -1.05
Sdf4-201ENSMUST00000050078 2310034G01RikA0A286YDL3 209 aa8.5□□□□□ -1.05
Sdf4-201ENSMUST00000050078 Lrrc37aB1AWG4 3215 aa8.5□□□□□ -1.05
Sdf4-201ENSMUST00000050078 Csdc2Q91YQ3 154 aa8.5□□□□□ -1.05
Sdf4-201ENSMUST00000050078 Gm16181B0V2H2 73 aa8.5□□□□□ -1.05
Sdf4-201ENSMUST00000050078 Gm21886J3QJU9 214 aa8.49□□□□□ -1.05
Sdf4-201ENSMUST00000050078 E130208F15RikQ3UPV3 143 aa8.49□□□□□ -1.05
Sdf4-201ENSMUST00000050078 Snhg11Q4G0K9 87 aa8.49□□□□□ -1.05
Sdf4-201ENSMUST00000050078 Gm44790A0A0N4SV91 103 aa8.48□□□□□ -1.05
Sdf4-201ENSMUST00000050078 Gm9903Q8C9Y8 129 aa8.48□□□□□ -1.05
Sdf4-201ENSMUST00000050078 Gm10197F6QEY5 67 aa8.48□□□□□ -1.05
Sdf4-201ENSMUST00000050078 Wfdc17Q5SSJ1 76 aa8.47□□□□□ -1.05
Sdf4-201ENSMUST00000050078 Krtap16-1A2A5X5 502 aa8.47□□□□□ -1.05
Sdf4-201ENSMUST00000050078 Elof1P60003 83 aa8.47□□□□□ -1.05
Sdf4-201ENSMUST00000050078 Defb39Q70KL3 74 aa8.47□□□□□ -1.05
Sdf4-201ENSMUST00000050078 Gm10770F7D043 238 aa8.47□□□□□ -1.05
Sdf4-201ENSMUST00000050078 Szt2A2A9C3 3431 aa8.47□□□□□ -1.05
Sdf4-201ENSMUST00000050078 Lypd5Q9D7Z7 256 aa8.46□□□□□ -1.06
Sdf4-201ENSMUST00000050078 7530416G11RikJ3QJX6 159 aa8.46□□□□□ -1.06
Sdf4-201ENSMUST00000050078 Gm17689B3GLJ4 109 aa8.45□□□□□ -1.06
Sdf4-201ENSMUST00000050078 Igkv3-7A0A0G2JE31 119 aa8.45□□□□□ -1.06
Sdf4-201ENSMUST00000050078 Gm11627A6PWP4 55 aa8.44□□□□□ -1.06
Sdf4-201ENSMUST00000050078 Wfdc6bF6ULY1 148 aa8.44□□□□□ -1.06
Sdf4-201ENSMUST00000050078 BptfA2A654 3036 aaKnown RBP8.44□□□□□ -1.06
Sdf4-201ENSMUST00000050078 Dmac1Q9CQ00 111 aa8.43□□□□□ -1.06
Sdf4-201ENSMUST00000050078 Ighv2-2A0A075B5P8 116 aa8.43□□□□□ -1.06
Sdf4-201ENSMUST00000050078 P01821 116 aa8.43□□□□□ -1.06
Sdf4-201ENSMUST00000050078 Defb50Q6TU36 73 aa8.43□□□□□ -1.06
Sdf4-201ENSMUST00000050078 Lelp1Q9DAE3 120 aa8.43□□□□□ -1.06
Sdf4-201ENSMUST00000050078 Gm3233E9Q2H5 230 aa8.42□□□□□ -1.06
Sdf4-201ENSMUST00000050078 Spint4Q9D263 159 aa8.42□□□□□ -1.06
Sdf4-201ENSMUST00000050078 Gm10642Q3TWM1 71 aa8.41□□□□□ -1.06
Sdf4-201ENSMUST00000050078 Itpr3P70227 2670 aa8.41□□□□□ -1.06
Sdf4-201ENSMUST00000050078 Celsr1O35161 3034 aa8.41□□□□□ -1.06
Sdf4-201ENSMUST00000050078 Krtap11-1E9Q2E9 183 aa8.41□□□□□ -1.06
Sdf4-201ENSMUST00000050078 A530084C06RikQ3UTW2 186 aa8.41□□□□□ -1.06
Sdf4-201ENSMUST00000050078 Celsr3Q91ZI0 3301 aa8.4□□□□□ -1.06
Sdf4-201ENSMUST00000050078 Igkv8-28A0A0G2JE47 121 aa8.39□□□□□ -1.07
Sdf4-201ENSMUST00000050078 Gm10308Q9CVR5 141 aa8.39□□□□□ -1.07
Sdf4-201ENSMUST00000050078 Psors1c2Q80ZC9 134 aa8.38□□□□□ -1.07
Sdf4-201ENSMUST00000050078 Bean1Q9EQG5 255 aa8.38□□□□□ -1.07
Sdf4-201ENSMUST00000050078 Muc2Q80Z19 2680 aa8.38□□□□□ -1.07
Sdf4-201ENSMUST00000050078 Rps28P62858 69 aaKnown RBP8.38□□□□□ -1.07
Sdf4-201ENSMUST00000050078 H2al1kJ3QP08 105 aa8.37□□□□□ -1.07
Sdf4-201ENSMUST00000050078 FryE9Q8I9 3020 aa8.37□□□□□ -1.07
Sdf4-201ENSMUST00000050078 Tep1P97499 2629 aa8.37□□□□□ -1.07
Sdf4-201ENSMUST00000050078 FrylF8VQ05 3007 aa8.37□□□□□ -1.07
Sdf4-201ENSMUST00000050078 Phf5aP83870 110 aaKnown RBP8.37□□□□□ -1.07
Sdf4-201ENSMUST00000050078 Fam168bQ80XQ8 194 aa8.36□□□□□ -1.07
Sdf4-201ENSMUST00000050078 Gm10160F6Y577 67 aa8.36□□□□□ -1.07
Sdf4-201ENSMUST00000050078 1810062G17RikG3X8Y2 129 aa8.36□□□□□ -1.07
Sdf4-201ENSMUST00000050078 Chchd10Q7TNL9 138 aa8.36□□□□□ -1.07
Sdf4-201ENSMUST00000050078 AY074887Q8R5F9 132 aa8.35□□□□□ -1.07
Sdf4-201ENSMUST00000050078 H2al1mQ9DAD9 105 aa8.35□□□□□ -1.07
Sdf4-201ENSMUST00000050078 Igkv8-19A0A0G2JFN8 121 aa8.34□□□□□ -1.07
Sdf4-201ENSMUST00000050078 Rpl37aP61514 92 aa8.34□□□□□ -1.07
Sdf4-201ENSMUST00000050078 Gm5617Q91VN2 117 aa8.34□□□□□ -1.07
Sdf4-201ENSMUST00000050078 Gm10837Q3UTT8 145 aa8.34□□□□□ -1.07
Sdf4-201ENSMUST00000050078 Sprr4Q8CGN8 76 aa8.33□□□□□ -1.08
Sdf4-201ENSMUST00000050078 Q8BT88 171 aa8.32□□□□□ -1.08
Sdf4-201ENSMUST00000050078 Col6a5A6H584 2640 aa8.31□□□□□ -1.08
Sdf4-201ENSMUST00000050078 C530025M09RikF6RGA8 229 aa8.31□□□□□ -1.08
Sdf4-201ENSMUST00000050078 Nbeal2Q6ZQA0 2742 aa8.31□□□□□ -1.08
Sdf4-201ENSMUST00000050078 Pkd1l1Q8R526 2615 aa8.3□□□□□ -1.08
Sdf4-201ENSMUST00000050078 Lama1P19137 3084 aa8.3□□□□□ -1.08
Sdf4-201ENSMUST00000050078 Tex15F8VPN2 2785 aa8.3□□□□□ -1.08
Sdf4-201ENSMUST00000050078 Prol1E9PYQ4 312 aa8.29□□□□□ -1.08
Sdf4-201ENSMUST00000050078 Sprr1bQ62267 153 aa8.29□□□□□ -1.08
Sdf4-201ENSMUST00000050078 AI606181Q8C7B9 129 aa8.28□□□□□ -1.08
Sdf4-201ENSMUST00000050078 AplnQ9R0R4 77 aa8.28□□□□□ -1.08
Sdf4-201ENSMUST00000050078 Gm28374F6SG70 93 aa8.26□□□□□ -1.09
Sdf4-201ENSMUST00000050078 A330070K13RikQ8CA53 115 aa8.26□□□□□ -1.09
Sdf4-201ENSMUST00000050078 Dmxl2Q8BPN8 3032 aa8.26□□□□□ -1.09
Sdf4-201ENSMUST00000050078 Igsf10Q3V1M1 2594 aa8.26□□□□□ -1.09
Sdf4-201ENSMUST00000050078 Col6a3E9PWQ3 3284 aa8.26□□□□□ -1.09
Sdf4-201ENSMUST00000050078 Znf414Q9DCK4 299 aa8.26□□□□□ -1.09
Sdf4-201ENSMUST00000050078 Brca2P97929 3329 aa8.23□□□□□ -1.09
Sdf4-201ENSMUST00000050078 Spaca4Q80ZQ0 127 aa8.22□□□□□ -1.09
Sdf4-201ENSMUST00000050078 Gm10999F6Q4M4 69 aa8.22□□□□□ -1.09
Retrieved 100 of 22,080 RNA–protein pairs in 60.4 ms