RNA–Protein interactions for RNA: ENSMUST00000050078.12

Sdf4-201, Transcript of 45 kDa calcium-binding protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sdf4, Length 5,177 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sdf4-201ENSMUST00000050078 Rhox8Q6VSS7 320 aa22.38■■□□□ 1.17
Sdf4-201ENSMUST00000050078 Ehmt2Q9Z148 1263 aaKnown RBP20.46■□□□□ 0.87
Sdf4-201ENSMUST00000050078 Rpgrip1Q9EPQ2 1331 aa20.32■□□□□ 0.84
Sdf4-201ENSMUST00000050078 Ccdc136Q3TVA9 1136 aa20.08■□□□□ 0.8
Sdf4-201ENSMUST00000050078 NischQ80TM9 1593 aa19.82■□□□□ 0.76
Sdf4-201ENSMUST00000050078 Cngb1E1AZ71 1325 aa19.63■□□□□ 0.73
Sdf4-201ENSMUST00000050078 Gab3Q8BSM5 595 aa19.59■□□□□ 0.73
Sdf4-201ENSMUST00000050078 Esf1Q3V1V3 845 aaKnown RBP19.53■□□□□ 0.72
Sdf4-201ENSMUST00000050078 Trim41Q5NCC3 630 aa19.5■□□□□ 0.71
Sdf4-201ENSMUST00000050078 Zeb1Q64318 1117 aa19.49■□□□□ 0.71
Sdf4-201ENSMUST00000050078 Wdr66E9Q743 1299 aa19.46■□□□□ 0.71
Sdf4-201ENSMUST00000050078 Las1lA2BE28 776 aaKnown RBP19.31■□□□□ 0.68
Sdf4-201ENSMUST00000050078 Acin1Q9JIX8 1338 aaKnown RBP19.21■□□□□ 0.67
Sdf4-201ENSMUST00000050078 Myt1lP97500 1187 aa19.13■□□□□ 0.65
Sdf4-201ENSMUST00000050078 Npm2Q80W85 207 aa19.1■□□□□ 0.65
Sdf4-201ENSMUST00000050078 Ube2uB1AUC4 352 aa19.04■□□□□ 0.64
Sdf4-201ENSMUST00000050078 UbtfP25976 765 aaKnown RBP18.88■□□□□ 0.61
Sdf4-201ENSMUST00000050078 HrcG5E8J6 738 aa18.82■□□□□ 0.6
Sdf4-201ENSMUST00000050078 NefmP08553 848 aa18.79■□□□□ 0.6
Sdf4-201ENSMUST00000050078 Ccdc180J3QNE4 1664 aa18.74■□□□□ 0.59
Sdf4-201ENSMUST00000050078 Pcgf6Q99NA9 353 aa18.71■□□□□ 0.59
Sdf4-201ENSMUST00000050078 Pelp1Q9DBD5 1123 aaKnown RBP18.53■□□□□ 0.56
Sdf4-201ENSMUST00000050078 CenpbP27790 599 aa18.51■□□□□ 0.55
Sdf4-201ENSMUST00000050078 Abcc9P70170 1546 aa18.49■□□□□ 0.55
Sdf4-201ENSMUST00000050078 Il27Q8K3I6 234 aa18.45■□□□□ 0.54
Sdf4-201ENSMUST00000050078 Ppargc1bQ8VHJ7 1014 aa18.44■□□□□ 0.54
Sdf4-201ENSMUST00000050078 Slc24a1Q91WD8 1130 aa18.44■□□□□ 0.54
Sdf4-201ENSMUST00000050078 Supt5hO55201 1082 aaKnown RBP18.42■□□□□ 0.54
Sdf4-201ENSMUST00000050078 Zcchc6Q5BLK4 1491 aaKnown RBP18.41■□□□□ 0.54
Sdf4-201ENSMUST00000050078 Rtl1Q7M732 1744 aa18.39■□□□□ 0.53
Sdf4-201ENSMUST00000050078 Cdk11bP24788 784 aaKnown RBP18.37■□□□□ 0.53
Sdf4-201ENSMUST00000050078 Ap3b1Q9Z1T1 1105 aa18.25■□□□□ 0.51
Sdf4-201ENSMUST00000050078 Nop58Q6DFW4 536 aaKnown RBP18.23■□□□□ 0.51
Sdf4-201ENSMUST00000050078 Stra8P70278 393 aa18.22■□□□□ 0.51
Sdf4-201ENSMUST00000050078 Fam50aQ9WV03 339 aaKnown RBP18.19■□□□□ 0.5
Sdf4-201ENSMUST00000050078 Mier1Q5UAK0 511 aa18.17■□□□□ 0.5
Sdf4-201ENSMUST00000050078 Gm35339A0A140LHH9 1649 aa18.17■□□□□ 0.5
Sdf4-201ENSMUST00000050078 Abcc8B2RUS7 1588 aa18.09■□□□□ 0.49
Sdf4-201ENSMUST00000050078 NclP09405 707 aaKnown RBP18.08■□□□□ 0.48
Sdf4-201ENSMUST00000050078 Neurod1Q60867 357 aa18.06■□□□□ 0.48
Sdf4-201ENSMUST00000050078 TonslQ6NZL6 1363 aa18.01■□□□□ 0.47
Sdf4-201ENSMUST00000050078 Amer1Q7TS75 1132 aa17.96■□□□□ 0.47
Sdf4-201ENSMUST00000050078 Plekhg3Q4VAC9 1341 aa17.9■□□□□ 0.46
Sdf4-201ENSMUST00000050078 Eif5bQ05D44 1216 aaKnown RBP17.89■□□□□ 0.45
Sdf4-201ENSMUST00000050078 NrdcQ8BHG1 1161 aa17.88■□□□□ 0.45
Sdf4-201ENSMUST00000050078 Tnnt3Q9QZ47 272 aa17.87■□□□□ 0.45
Sdf4-201ENSMUST00000050078 Ttbk1Q6PCN3 1308 aa17.84■□□□□ 0.45
Sdf4-201ENSMUST00000050078 Chic1Q8CBW7 227 aa17.81■□□□□ 0.44
Sdf4-201ENSMUST00000050078 Lmod2Q3UHZ5 550 aa17.79■□□□□ 0.44
Sdf4-201ENSMUST00000050078 Sall2Q9QX96 1004 aa17.76■□□□□ 0.43
Sdf4-201ENSMUST00000050078 ClspnQ80YR7 1315 aa17.73■□□□□ 0.43
Sdf4-201ENSMUST00000050078 Eid3Q3V124 375 aa17.72■□□□□ 0.43
Sdf4-201ENSMUST00000050078 Mapk8ip2Q9ERE9 830 aa17.71■□□□□ 0.43
Sdf4-201ENSMUST00000050078 Anp32bQ9EST5 272 aaKnown RBP17.68■□□□□ 0.42
Sdf4-201ENSMUST00000050078 Dcaf1Q80TR8 1506 aa17.65■□□□□ 0.42
Sdf4-201ENSMUST00000050078 Myt1Q8CFC2 1127 aa17.65■□□□□ 0.42
Sdf4-201ENSMUST00000050078 Gm38655A0A286YDK6 273 aa17.62■□□□□ 0.41
Sdf4-201ENSMUST00000050078 Cep164Q5DU05 1446 aa17.6■□□□□ 0.41
Sdf4-201ENSMUST00000050078 NeflP08551 543 aa17.58■□□□□ 0.4
Sdf4-201ENSMUST00000050078 Os9Q8K2C7 672 aa17.57■□□□□ 0.4
Sdf4-201ENSMUST00000050078 Npm1Q61937 292 aaKnown RBP17.56■□□□□ 0.4
Sdf4-201ENSMUST00000050078 Zbtb7cQ8VCZ7 619 aa17.56■□□□□ 0.4
Sdf4-201ENSMUST00000050078 4933416C03RikQ3V063 378 aa17.54■□□□□ 0.4
Sdf4-201ENSMUST00000050078 Csrnp3P59055 597 aa17.53■□□□□ 0.4
Sdf4-201ENSMUST00000050078 Clip1Q922J3 1391 aa17.49■□□□□ 0.39
Sdf4-201ENSMUST00000050078 Brd4Q9ESU6 1400 aaKnown RBP17.49■□□□□ 0.39
Sdf4-201ENSMUST00000050078 Anks4bQ8K3X6 423 aa17.46■□□□□ 0.39
Sdf4-201ENSMUST00000050078 Zbtb4Q5F293 982 aa17.42■□□□□ 0.38
Sdf4-201ENSMUST00000050078 Rb1cc1Q9ESK9 1588 aa17.42■□□□□ 0.38
Sdf4-201ENSMUST00000050078 Hnrnpul2Q00PI9 745 aaKnown RBP17.35■□□□□ 0.37
Sdf4-201ENSMUST00000050078 Anp32aO35381 247 aa17.34■□□□□ 0.37
Sdf4-201ENSMUST00000050078 Aebp2Q9Z248 504 aaKnown RBP17.25■□□□□ 0.35
Sdf4-201ENSMUST00000050078 Rtl5Q5DTT4 599 aa17.24■□□□□ 0.35
Sdf4-201ENSMUST00000050078 Aplp2Q06335 707 aa17.21■□□□□ 0.35
Sdf4-201ENSMUST00000050078 Ifnlr1Q8CGK5 535 aa17.2■□□□□ 0.34
Sdf4-201ENSMUST00000050078 Fkbp15Q6P9Q6 1216 aaKnown RBP17.18■□□□□ 0.34
Sdf4-201ENSMUST00000050078 Prdm10Q3UTQ7 1184 aa17.18■□□□□ 0.34
Sdf4-201ENSMUST00000050078 Chic2Q9D9G3 165 aa17.18■□□□□ 0.34
Sdf4-201ENSMUST00000050078 Erich6D3Z6S9 713 aa17.14■□□□□ 0.33
Sdf4-201ENSMUST00000050078 DaxxO35613 739 aa17.12■□□□□ 0.33
Sdf4-201ENSMUST00000050078 BlmO88700 1416 aa17.11■□□□□ 0.33
Sdf4-201ENSMUST00000050078 Calr4Q3TQS0 420 aa17.11■□□□□ 0.33
Sdf4-201ENSMUST00000050078 Ccer2J3QPU5 274 aa17.1■□□□□ 0.33
Sdf4-201ENSMUST00000050078 1700123L14RikQ3V2K7 440 aa17.08■□□□□ 0.32
Sdf4-201ENSMUST00000050078 Ppp4r2Q0VGB7 417 aa17.07■□□□□ 0.32
Sdf4-201ENSMUST00000050078 Mrs2Q5NCE8 434 aa17.06■□□□□ 0.32
Sdf4-201ENSMUST00000050078 DiexfQ8BTT6 772 aaKnown RBP17.05■□□□□ 0.32
Sdf4-201ENSMUST00000050078 Ubl4bQ9CQ84 188 aa17.04■□□□□ 0.32
Sdf4-201ENSMUST00000050078 Setd5Q5XJV7 1441 aa17.02■□□□□ 0.32
Sdf4-201ENSMUST00000050078 Rsf1E9PWW9 1441 aaKnown RBP17.01■□□□□ 0.31
Sdf4-201ENSMUST00000050078 Nlrp6Q91WS2 869 aa17.01■□□□□ 0.31
Sdf4-201ENSMUST00000050078 Golga3P55937 1487 aa17.01■□□□□ 0.31
Sdf4-201ENSMUST00000050078 Polr3glQ8R0C0 218 aa17■□□□□ 0.31
Sdf4-201ENSMUST00000050078 Baz1aO88379 1555 aa17■□□□□ 0.31
Sdf4-201ENSMUST00000050078 NacadQ5SWP3 1504 aa16.99■□□□□ 0.31
Sdf4-201ENSMUST00000050078 ArxO35085 564 aa16.98■□□□□ 0.31
Sdf4-201ENSMUST00000050078 Rad21Q61550 635 aaKnown RBP16.94■□□□□ 0.3
Sdf4-201ENSMUST00000050078 Atp1b4Q99ME6 356 aa16.94■□□□□ 0.3
Sdf4-201ENSMUST00000050078 4930567H17RikQ3V0K5 233 aa16.93■□□□□ 0.3
Sdf4-201ENSMUST00000050078 Wdr43Q6ZQL4 677 aaKnown RBP16.91■□□□□ 0.3
Retrieved 100 of 22,080 RNA–protein pairs in 210.7 ms