RNA–Protein interactions for RNA: ENSMUST00000041639.6

Syne1-201, Transcript of Nesprin-1, mousemouse

TSL 1 (best) BASIC

Gene Syne1, Length 6,990 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Syne1-201ENSMUST00000041639 TrioQ0KL02 3102 aa6.7□□□□□ -1.34
Syne1-201ENSMUST00000041639 Rps28P62858 69 aaKnown RBP6.69□□□□□ -1.34
Syne1-201ENSMUST00000041639 FasnP19096 2504 aaKnown RBP6.69□□□□□ -1.34
Syne1-201ENSMUST00000041639 Rpl37aP61514 92 aa6.68□□□□□ -1.34
Syne1-201ENSMUST00000041639 Ankrd17Q99NH0 2603 aaKnown RBP6.68□□□□□ -1.34
Syne1-201ENSMUST00000041639 Gm10772F7AIG4 85 aa6.68□□□□□ -1.34
Syne1-201ENSMUST00000041639 Gm26661M0QWV4 156 aa6.68□□□□□ -1.34
Syne1-201ENSMUST00000041639 Prune2Q52KR3 3084 aa6.68□□□□□ -1.34
Syne1-201ENSMUST00000041639 Gm17689B3GLJ4 109 aa6.67□□□□□ -1.34
Syne1-201ENSMUST00000041639 A930002H24RikQ8C8Y3 163 aa6.67□□□□□ -1.34
Syne1-201ENSMUST00000041639 Gm9903Q8C9Y8 129 aa6.66□□□□□ -1.34
Syne1-201ENSMUST00000041639 Prr13Q9CQJ5 137 aa6.66□□□□□ -1.34
Syne1-201ENSMUST00000041639 CenpfE9Q3P4 2997 aaKnown RBP6.66□□□□□ -1.34
Syne1-201ENSMUST00000041639 7530416G11RikJ3QJX6 159 aa6.65□□□□□ -1.34
Syne1-201ENSMUST00000041639 Gm12216A0A1W2P827 62 aa6.65□□□□□ -1.34
Syne1-201ENSMUST00000041639 Znf414Q9DCK4 299 aa6.65□□□□□ -1.35
Syne1-201ENSMUST00000041639 Gm10308Q9CVR5 141 aa6.64□□□□□ -1.35
Syne1-201ENSMUST00000041639 Eif4ebp3Q80VV3 101 aa6.64□□□□□ -1.35
Syne1-201ENSMUST00000041639 Spaca4Q80ZQ0 127 aa6.64□□□□□ -1.35
Syne1-201ENSMUST00000041639 Krtap26-1Q9D7N2 215 aa6.64□□□□□ -1.35
Syne1-201ENSMUST00000041639 Defb1P56386 69 aa6.64□□□□□ -1.35
Syne1-201ENSMUST00000041639 Gpr15lA0A0B4J1N3 78 aa6.63□□□□□ -1.35
Syne1-201ENSMUST00000041639 Q8BT88 171 aa6.63□□□□□ -1.35
Syne1-201ENSMUST00000041639 Gm20661K7N787 53 aa6.63□□□□□ -1.35
Syne1-201ENSMUST00000041639 Gm10837Q3UTT8 145 aa6.62□□□□□ -1.35
Syne1-201ENSMUST00000041639 UtrnE9Q6R7 3430 aa6.62□□□□□ -1.35
Syne1-201ENSMUST00000041639 Fam168bQ80XQ8 194 aa6.62□□□□□ -1.35
Syne1-201ENSMUST00000041639 Limd2Q8BGB5 128 aa6.62□□□□□ -1.35
Syne1-201ENSMUST00000041639 Dmbt1Q60997 2085 aa6.62□□□□□ -1.35
Syne1-201ENSMUST00000041639 FlnbQ80X90 2602 aaKnown RBP6.61□□□□□ -1.35
Syne1-201ENSMUST00000041639 Gm5617Q91VN2 117 aa6.6□□□□□ -1.35
Syne1-201ENSMUST00000041639 Prol1E9PYQ4 312 aa6.6□□□□□ -1.35
Syne1-201ENSMUST00000041639 Krtap11-1E9Q2E9 183 aa6.6□□□□□ -1.35
Syne1-201ENSMUST00000041639 Psors1c2Q80ZC9 134 aa6.6□□□□□ -1.35
Syne1-201ENSMUST00000041639 Fn1P11276 2477 aaKnown RBP6.59□□□□□ -1.35
Syne1-201ENSMUST00000041639 HrnrQ8VHD8 2496 aa6.59□□□□□ -1.35
Syne1-201ENSMUST00000041639 Defb11Q8R2I7 77 aa6.58□□□□□ -1.36
Syne1-201ENSMUST00000041639 Coa5Q99M07 74 aa6.57□□□□□ -1.36
Syne1-201ENSMUST00000041639 4930507D05RikQ8C9C9 103 aa6.57□□□□□ -1.36
Syne1-201ENSMUST00000041639 Prrc2cQ3TLH4 2846 aaKnown RBP6.57□□□□□ -1.36
Syne1-201ENSMUST00000041639 Kmt2bO08550 2713 aa6.57□□□□□ -1.36
Syne1-201ENSMUST00000041639 AplnQ9R0R4 77 aa6.57□□□□□ -1.36
Syne1-201ENSMUST00000041639 Q8BGJ3 129 aa6.57□□□□□ -1.36
Syne1-201ENSMUST00000041639 Gm27235Q3UW50 83 aa6.56□□□□□ -1.36
Syne1-201ENSMUST00000041639 AtrQ9JKK8 2635 aa6.56□□□□□ -1.36
Syne1-201ENSMUST00000041639 Sprr4Q8CGN8 76 aa6.55□□□□□ -1.36
Syne1-201ENSMUST00000041639 RetnlbQ99P86 105 aa6.55□□□□□ -1.36
Syne1-201ENSMUST00000041639 Cdc42se1Q8BHL7 80 aa6.54□□□□□ -1.36
Syne1-201ENSMUST00000041639 AY074887Q8R5F9 132 aa6.54□□□□□ -1.36
Syne1-201ENSMUST00000041639 Nsd1O88491 2588 aaKnown RBP6.53□□□□□ -1.36
Syne1-201ENSMUST00000041639 Gcn1E9PVA8 2671 aaKnown RBP6.53□□□□□ -1.36
Syne1-201ENSMUST00000041639 Lama3Q61789 3330 aa6.52□□□□□ -1.37
Syne1-201ENSMUST00000041639 1810062G17RikG3X8Y2 129 aa6.51□□□□□ -1.37
Syne1-201ENSMUST00000041639 Phxr5P08399 672 aa6.5□□□□□ -1.37
Syne1-201ENSMUST00000041639 A330070K13RikQ8CA53 115 aa6.5□□□□□ -1.37
Syne1-201ENSMUST00000041639 Akap13E9Q394 2776 aa6.5□□□□□ -1.37
Syne1-201ENSMUST00000041639 Lypd5Q9D7Z7 256 aa6.49□□□□□ -1.37
Syne1-201ENSMUST00000041639 Spata3Q9D9T6 193 aa6.49□□□□□ -1.37
Syne1-201ENSMUST00000041639 C530025M09RikF6RGA8 229 aa6.48□□□□□ -1.37
Syne1-201ENSMUST00000041639 Notch1Q01705 2531 aa6.47□□□□□ -1.37
Syne1-201ENSMUST00000041639 Phxr4P15974 95 aa6.47□□□□□ -1.37
Syne1-201ENSMUST00000041639 Lama2Q60675 3118 aaKnown RBP6.46□□□□□ -1.37
Syne1-201ENSMUST00000041639 Sprr1bQ62267 153 aa6.46□□□□□ -1.37
Syne1-201ENSMUST00000041639 Mp68P56379 58 aa6.46□□□□□ -1.38
Syne1-201ENSMUST00000041639 FlnaQ8BTM8 2647 aaKnown RBP6.46□□□□□ -1.38
Syne1-201ENSMUST00000041639 Gm3233E9Q2H5 230 aa6.45□□□□□ -1.38
Syne1-201ENSMUST00000041639 Mki67E9PVX6 3177 aaKnown RBP6.43□□□□□ -1.38
Syne1-201ENSMUST00000041639 Gm7276Q3TYW4 209 aa6.42□□□□□ -1.38
Syne1-201ENSMUST00000041639 Anapc11Q9CPX9 84 aa6.42□□□□□ -1.38
Syne1-201ENSMUST00000041639 Defb9Q8R2I6 67 aa6.42□□□□□ -1.38
Syne1-201ENSMUST00000041639 Bod1lE9Q6J5 3032 aa6.41□□□□□ -1.38
Syne1-201ENSMUST00000041639 Fam229bQ8CF36 80 aa6.4□□□□□ -1.38
Syne1-201ENSMUST00000041639 Cypt15B1AXS0 87 aa6.4□□□□□ -1.39
Syne1-201ENSMUST00000041639 Gm7173A0A0G2JEB6 3132 aa6.4□□□□□ -1.39
Syne1-201ENSMUST00000041639 Uqcr11Q9CPX8 56 aa6.39□□□□□ -1.39
Syne1-201ENSMUST00000041639 Chtf8P0CG14 533 aa6.38□□□□□ -1.39
Syne1-201ENSMUST00000041639 Plac8Q9JI48 112 aa6.37□□□□□ -1.39
Syne1-201ENSMUST00000041639 Usp34Q6ZQ93 3582 aa6.37□□□□□ -1.39
Syne1-201ENSMUST00000041639 Rnase13Q5GAM7 153 aa6.36□□□□□ -1.39
Syne1-201ENSMUST00000041639 Map1aQ9QYR6 2776 aa6.35□□□□□ -1.39
Syne1-201ENSMUST00000041639 Gm9195A0A140LHT4 2805 aa6.33□□□□□ -1.4
Syne1-201ENSMUST00000041639 Ranbp2Q9ERU9 3053 aaKnown RBP6.33□□□□□ -1.4
Syne1-201ENSMUST00000041639 Gm11213A0A1B0GR83 88 aa6.32□□□□□ -1.4
Syne1-201ENSMUST00000041639 Smim29Q8R043 75 aa6.32□□□□□ -1.4
Syne1-201ENSMUST00000041639 CnbpP53996 178 aaKnown RBP6.31□□□□□ -1.4
Syne1-201ENSMUST00000041639 Ash1lQ99MY8 2958 aa6.31□□□□□ -1.4
Syne1-201ENSMUST00000041639 Col12a1Q60847 3120 aa6.31□□□□□ -1.4
Syne1-201ENSMUST00000041639 Gm10643Q3URG9 111 aa6.3□□□□□ -1.4
Syne1-201ENSMUST00000041639 Fam104aA2A6P4 185 aa6.29□□□□□ -1.4
Syne1-201ENSMUST00000041639 Mast4Q811L6 2618 aa6.29□□□□□ -1.4
Syne1-201ENSMUST00000041639 AW011738F6S7Q2 159 aa6.29□□□□□ -1.4
Syne1-201ENSMUST00000041639 Lelp1Q9DAE3 120 aa6.29□□□□□ -1.4
Syne1-201ENSMUST00000041639 Hectd1Q69ZR2 2618 aaKnown RBP6.29□□□□□ -1.4
Syne1-201ENSMUST00000041639 Gm7138L7N2C3 230 aa6.28□□□□□ -1.4
Syne1-201ENSMUST00000041639 Gm3238W4VSP7 230 aa6.28□□□□□ -1.4
Syne1-201ENSMUST00000041639 2310034C09RikQ9D746 214 aa6.28□□□□□ -1.4
Syne1-201ENSMUST00000041639 Stab1Q8R4Y4 2571 aa6.27□□□□□ -1.41
Syne1-201ENSMUST00000041639 Cfap54Q8C6S9 3106 aa6.26□□□□□ -1.41
Syne1-201ENSMUST00000041639 NipblQ6KCD5 2798 aaKnown RBP6.26□□□□□ -1.41
Syne1-201ENSMUST00000041639 Zcchc13Q9D548 170 aa6.25□□□□□ -1.41
Retrieved 100 of 22,080 RNA–protein pairs in 83.5 ms