RNA–Protein interactions for RNA: ENSMUST00000035935.8

Ccdc40-201, Transcript of Coiled-coil domain-containing protein 40, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ccdc40, Length 4,979 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40-201ENSMUST00000035935 Cep192E9Q4Y4 2514 aaKnown RBP6.87□□□□□ -1.31
Ccdc40-201ENSMUST00000035935 Gm44790A0A0N4SV91 103 aa6.87□□□□□ -1.31
Ccdc40-201ENSMUST00000035935 Myo15bI7HPW8 3033 aa6.86□□□□□ -1.31
Ccdc40-201ENSMUST00000035935 Gm7276Q3TYW4 209 aa6.86□□□□□ -1.31
Ccdc40-201ENSMUST00000035935 Gm3250E9Q1M3 230 aa6.86□□□□□ -1.31
Ccdc40-201ENSMUST00000035935 Gm10642Q3TWM1 71 aa6.86□□□□□ -1.31
Ccdc40-201ENSMUST00000035935 1810062G17RikG3X8Y2 129 aa6.85□□□□□ -1.31
Ccdc40-201ENSMUST00000035935 AI606181Q8C7B9 129 aa6.84□□□□□ -1.31
Ccdc40-201ENSMUST00000035935 Phf5aP83870 110 aaKnown RBP6.84□□□□□ -1.32
Ccdc40-201ENSMUST00000035935 Gm27235Q3UW50 83 aa6.84□□□□□ -1.32
Ccdc40-201ENSMUST00000035935 Igkv3-7A0A0G2JE31 119 aa6.83□□□□□ -1.32
Ccdc40-201ENSMUST00000035935 Igkv8-19A0A0G2JFN8 121 aa6.83□□□□□ -1.32
Ccdc40-201ENSMUST00000035935 C530025M09RikF6RGA8 229 aa6.83□□□□□ -1.32
Ccdc40-201ENSMUST00000035935 Gm10160F6Y577 67 aa6.83□□□□□ -1.32
Ccdc40-201ENSMUST00000035935 7530416G11RikJ3QJX6 159 aa6.83□□□□□ -1.32
Ccdc40-201ENSMUST00000035935 A930002H24RikQ8C8Y3 163 aa6.83□□□□□ -1.32
Ccdc40-201ENSMUST00000035935 Ankrd17Q99NH0 2603 aaKnown RBP6.83□□□□□ -1.32
Ccdc40-201ENSMUST00000035935 Defb38Q7TNV7 63 aa6.83□□□□□ -1.32
Ccdc40-201ENSMUST00000035935 Gm10197F6QEY5 67 aa6.81□□□□□ -1.32
Ccdc40-201ENSMUST00000035935 Prr13Q9CQJ5 137 aa6.81□□□□□ -1.32
Ccdc40-201ENSMUST00000035935 Tnrc18Q80WC3 2878 aa6.81□□□□□ -1.32
Ccdc40-201ENSMUST00000035935 Wfdc3Q14AE4 130 aa6.81□□□□□ -1.32
Ccdc40-201ENSMUST00000035935 Lelp1Q9DAE3 120 aa6.8□□□□□ -1.32
Ccdc40-201ENSMUST00000035935 Spint4Q9D263 159 aa6.8□□□□□ -1.32
Ccdc40-201ENSMUST00000035935 Hectd1Q69ZR2 2618 aaKnown RBP6.8□□□□□ -1.32
Ccdc40-201ENSMUST00000035935 Gm17689B3GLJ4 109 aa6.79□□□□□ -1.32
Ccdc40-201ENSMUST00000035935 Wfdc17Q5SSJ1 76 aa6.79□□□□□ -1.32
Ccdc40-201ENSMUST00000035935 Q8BT88 171 aa6.79□□□□□ -1.32
Ccdc40-201ENSMUST00000035935 H2al1kJ3QP08 105 aa6.79□□□□□ -1.32
Ccdc40-201ENSMUST00000035935 Defb39Q70KL3 74 aa6.78□□□□□ -1.32
Ccdc40-201ENSMUST00000035935 Fam168bQ80XQ8 194 aa6.78□□□□□ -1.32
Ccdc40-201ENSMUST00000035935 Prune2Q52KR3 3084 aa6.78□□□□□ -1.32
Ccdc40-201ENSMUST00000035935 Itpr1P11881 2749 aa6.77□□□□□ -1.33
Ccdc40-201ENSMUST00000035935 CnbpP53996 178 aaKnown RBP6.77□□□□□ -1.33
Ccdc40-201ENSMUST00000035935 Nbeal1E9PYP2 2688 aa6.76□□□□□ -1.33
Ccdc40-201ENSMUST00000035935 Gm11213A0A1B0GR83 88 aa6.76□□□□□ -1.33
Ccdc40-201ENSMUST00000035935 CicQ924A2 2510 aa6.75□□□□□ -1.33
Ccdc40-201ENSMUST00000035935 Gm7173A0A0G2JEB6 3132 aa6.74□□□□□ -1.33
Ccdc40-201ENSMUST00000035935 A530084C06RikQ3UTW2 186 aa6.74□□□□□ -1.33
Ccdc40-201ENSMUST00000035935 Limd2Q8BGB5 128 aa6.74□□□□□ -1.33
Ccdc40-201ENSMUST00000035935 Lama3Q61789 3330 aa6.73□□□□□ -1.33
Ccdc40-201ENSMUST00000035935 H2al1mQ9DAD9 105 aa6.73□□□□□ -1.33
Ccdc40-201ENSMUST00000035935 HttP42859 3119 aa6.73□□□□□ -1.33
Ccdc40-201ENSMUST00000035935 Rpl37aP61514 92 aa6.72□□□□□ -1.33
Ccdc40-201ENSMUST00000035935 Cdc42se1Q8BHL7 80 aa6.71□□□□□ -1.33
Ccdc40-201ENSMUST00000035935 Fam104aA2A6P4 185 aa6.7□□□□□ -1.34
Ccdc40-201ENSMUST00000035935 Bean1Q9EQG5 255 aa6.7□□□□□ -1.34
Ccdc40-201ENSMUST00000035935 AtrQ9JKK8 2635 aa6.69□□□□□ -1.34
Ccdc40-201ENSMUST00000035935 Gpr15lA0A0B4J1N3 78 aa6.68□□□□□ -1.34
Ccdc40-201ENSMUST00000035935 Coa5Q99M07 74 aa6.68□□□□□ -1.34
Ccdc40-201ENSMUST00000035935 Chd7A2AJK6 2986 aaKnown RBP6.67□□□□□ -1.34
Ccdc40-201ENSMUST00000035935 Zcchc13Q9D548 170 aa6.67□□□□□ -1.34
Ccdc40-201ENSMUST00000035935 A330070K13RikQ8CA53 115 aa6.67□□□□□ -1.34
Ccdc40-201ENSMUST00000035935 Usp9yF8VPU6 2556 aa6.67□□□□□ -1.34
Ccdc40-201ENSMUST00000035935 Usp34Q6ZQ93 3582 aa6.67□□□□□ -1.34
Ccdc40-201ENSMUST00000035935 Phxr5P08399 672 aa6.67□□□□□ -1.34
Ccdc40-201ENSMUST00000035935 Gm5617Q91VN2 117 aa6.67□□□□□ -1.34
Ccdc40-201ENSMUST00000035935 FasnP19096 2504 aaKnown RBP6.65□□□□□ -1.34
Ccdc40-201ENSMUST00000035935 4930507D05RikQ8C9C9 103 aa6.65□□□□□ -1.35
Ccdc40-201ENSMUST00000035935 Gm9195A0A140LHT4 2805 aa6.64□□□□□ -1.35
Ccdc40-201ENSMUST00000035935 Gm3233E9Q2H5 230 aa6.64□□□□□ -1.35
Ccdc40-201ENSMUST00000035935 Gm10999F6Q4M4 69 aa6.64□□□□□ -1.35
Ccdc40-201ENSMUST00000035935 FlnaQ8BTM8 2647 aaKnown RBP6.63□□□□□ -1.35
Ccdc40-201ENSMUST00000035935 Spaca4Q80ZQ0 127 aa6.63□□□□□ -1.35
Ccdc40-201ENSMUST00000035935 Defb9Q8R2I6 67 aa6.63□□□□□ -1.35
Ccdc40-201ENSMUST00000035935 Gm20661K7N787 53 aa6.62□□□□□ -1.35
Ccdc40-201ENSMUST00000035935 Col12a1Q60847 3120 aa6.62□□□□□ -1.35
Ccdc40-201ENSMUST00000035935 Mki67E9PVX6 3177 aaKnown RBP6.61□□□□□ -1.35
Ccdc40-201ENSMUST00000035935 Phxr4P15974 95 aa6.6□□□□□ -1.35
Ccdc40-201ENSMUST00000035935 Gm17606F6ZL36 78 aa6.6□□□□□ -1.35
Ccdc40-201ENSMUST00000035935 Usp24B1AY13 2617 aaKnown RBP6.58□□□□□ -1.36
Ccdc40-201ENSMUST00000035935 Rev3lQ61493 3122 aa6.57□□□□□ -1.36
Ccdc40-201ENSMUST00000035935 Cypt15B1AXS0 87 aa6.56□□□□□ -1.36
Ccdc40-201ENSMUST00000035935 Gcn1E9PVA8 2671 aaKnown RBP6.55□□□□□ -1.36
Ccdc40-201ENSMUST00000035935 Gm10065F6TJM2 114 aa6.55□□□□□ -1.36
Ccdc40-201ENSMUST00000035935 Gm10320E9PW43 113 aa6.54□□□□□ -1.36
Ccdc40-201ENSMUST00000035935 Q8BGJ3 129 aa6.53□□□□□ -1.36
Ccdc40-201ENSMUST00000035935 Uqcr11Q9CPX8 56 aa6.53□□□□□ -1.36
Ccdc40-201ENSMUST00000035935 Cypt14J3QPF7 87 aa6.53□□□□□ -1.36
Ccdc40-201ENSMUST00000035935 Fam229bQ8CF36 80 aa6.52□□□□□ -1.37
Ccdc40-201ENSMUST00000035935 OxtP35454 125 aa6.52□□□□□ -1.37
Ccdc40-201ENSMUST00000035935 Dmbt1Q60997 2085 aa6.52□□□□□ -1.37
Ccdc40-201ENSMUST00000035935 Smim29Q8R043 75 aa6.52□□□□□ -1.37
Ccdc40-201ENSMUST00000035935 Jbts17Q8CE72 3214 aa6.51□□□□□ -1.37
Ccdc40-201ENSMUST00000035935 Plac8Q9JI48 112 aa6.51□□□□□ -1.37
Ccdc40-201ENSMUST00000035935 Map1aQ9QYR6 2776 aa6.51□□□□□ -1.37
Ccdc40-201ENSMUST00000035935 Sprr1aQ62266 144 aa6.5□□□□□ -1.37
Ccdc40-201ENSMUST00000035935 NbdyA0A0N4SUI7 68 aa6.5□□□□□ -1.37
Ccdc40-201ENSMUST00000035935 Akap13E9Q394 2776 aa6.49□□□□□ -1.37
Ccdc40-201ENSMUST00000035935 Gm10643Q3URG9 111 aa6.49□□□□□ -1.37
Ccdc40-201ENSMUST00000035935 MgaA2AWL7 3003 aaKnown RBP6.49□□□□□ -1.37
Ccdc40-201ENSMUST00000035935 KalrnA2CG49 2964 aa6.48□□□□□ -1.37
Ccdc40-201ENSMUST00000035935 Chtf8P0CG14 533 aa6.48□□□□□ -1.37
Ccdc40-201ENSMUST00000035935 Gm7138L7N2C3 230 aa6.48□□□□□ -1.37
Ccdc40-201ENSMUST00000035935 Gm3238W4VSP7 230 aa6.48□□□□□ -1.37
Ccdc40-201ENSMUST00000035935 Fbn2Q61555 2907 aa6.48□□□□□ -1.37
Ccdc40-201ENSMUST00000035935 RetnlbQ99P86 105 aa6.47□□□□□ -1.37
Ccdc40-201ENSMUST00000035935 Dmxl1Q6PNC0 3013 aa6.47□□□□□ -1.37
Ccdc40-201ENSMUST00000035935 Gm10139O88245 57 aa6.46□□□□□ -1.38
Ccdc40-201ENSMUST00000035935 Gm12216A0A1W2P827 62 aa6.44□□□□□ -1.38
Retrieved 100 of 22,080 RNA–protein pairs in 14.9 ms