RNA–Protein interactions for RNA: ENSMUST00000030992.12

Rnf4-201, Transcript of E3 ubiquitin-protein ligase RNF4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rnf4, Length 2,895 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf4-201ENSMUST00000030992 Cystm1Q8K353 104 aa8.36□□□□□ -1.07
Rnf4-201ENSMUST00000030992 Ighv2-5A0A0A6YY69 116 aa8.35□□□□□ -1.07
Rnf4-201ENSMUST00000030992 Igkv1-88A0A140T8N1 120 aa8.35□□□□□ -1.07
Rnf4-201ENSMUST00000030992 9530003J23RikQ8BM26 151 aa8.35□□□□□ -1.07
Rnf4-201ENSMUST00000030992 Cd164Q9R0L9 197 aa8.34□□□□□ -1.07
Rnf4-201ENSMUST00000030992 Dnah7bL7N1Y0 4068 aa8.34□□□□□ -1.07
Rnf4-201ENSMUST00000030992 Gm7276Q3TYW4 209 aa8.34□□□□□ -1.07
Rnf4-201ENSMUST00000030992 BC048502Q80Y74 154 aa8.33□□□□□ -1.08
Rnf4-201ENSMUST00000030992 A730071L15RikQ8C4X0 137 aa8.33□□□□□ -1.08
Rnf4-201ENSMUST00000030992 7530416G11RikJ3QJX6 159 aa8.33□□□□□ -1.08
Rnf4-201ENSMUST00000030992 Gm7137J3QMW1 236 aa8.32□□□□□ -1.08
Rnf4-201ENSMUST00000030992 Lamtor3O88653 124 aa8.32□□□□□ -1.08
Rnf4-201ENSMUST00000030992 4930535I16RikQ9CUI2 172 aa8.32□□□□□ -1.08
Rnf4-201ENSMUST00000030992 Cdk2ap2Q9CPY4 127 aa8.32□□□□□ -1.08
Rnf4-201ENSMUST00000030992 PkigO70139 76 aa8.31□□□□□ -1.08
Rnf4-201ENSMUST00000030992 Defa25Q5G864 92 aa8.31□□□□□ -1.08
Rnf4-201ENSMUST00000030992 PtprqP0C5E4 2300 aa8.31□□□□□ -1.08
Rnf4-201ENSMUST00000030992 Defa16P50714 93 aa8.31□□□□□ -1.08
Rnf4-201ENSMUST00000030992 Sprr1aQ62266 144 aa8.3□□□□□ -1.08
Rnf4-201ENSMUST00000030992 Gm16485Q8C4B7 115 aa8.3□□□□□ -1.08
Rnf4-201ENSMUST00000030992 Smim29Q8R043 75 aa8.3□□□□□ -1.08
Rnf4-201ENSMUST00000030992 VwfQ8CIZ8 2813 aa8.3□□□□□ -1.08
Rnf4-201ENSMUST00000030992 Nsd1O88491 2588 aaKnown RBP8.29□□□□□ -1.08
Rnf4-201ENSMUST00000030992 Notch1Q01705 2531 aa8.29□□□□□ -1.08
Rnf4-201ENSMUST00000030992 Defb37Q7TMD2 62 aa8.28□□□□□ -1.08
Rnf4-201ENSMUST00000030992 Ubl5Q9EPV8 73 aa8.28□□□□□ -1.08
Rnf4-201ENSMUST00000030992 Rbm3O89086 153 aaKnown RBP8.28□□□□□ -1.08
Rnf4-201ENSMUST00000030992 Pde6gP09174 87 aa8.28□□□□□ -1.08
Rnf4-201ENSMUST00000030992 Pou2af1Q64693 256 aa8.27□□□□□ -1.09
Rnf4-201ENSMUST00000030992 Col6a5A6H584 2640 aa8.27□□□□□ -1.09
Rnf4-201ENSMUST00000030992 FlnbQ80X90 2602 aaKnown RBP8.26□□□□□ -1.09
Rnf4-201ENSMUST00000030992 Gm11627A6PWP4 55 aa8.26□□□□□ -1.09
Rnf4-201ENSMUST00000030992 Fam19a1Q7TPG8 133 aa8.26□□□□□ -1.09
Rnf4-201ENSMUST00000030992 Vpreb2P13373 142 aa8.25□□□□□ -1.09
Rnf4-201ENSMUST00000030992 Csmd3Q80T79 3707 aa8.25□□□□□ -1.09
Rnf4-201ENSMUST00000030992 Igkv8-28A0A0G2JE47 121 aa8.24□□□□□ -1.09
Rnf4-201ENSMUST00000030992 Ighv2-2A0A075B5P8 116 aa8.24□□□□□ -1.09
Rnf4-201ENSMUST00000030992 Smim20D3Z7Q2 69 aa8.24□□□□□ -1.09
Rnf4-201ENSMUST00000030992 P01821 116 aa8.24□□□□□ -1.09
Rnf4-201ENSMUST00000030992 P84750 121 aa8.24□□□□□ -1.09
Rnf4-201ENSMUST00000030992 Sslp1Q3UN54 99 aa8.24□□□□□ -1.09
Rnf4-201ENSMUST00000030992 ScxQ64124 207 aa8.24□□□□□ -1.09
Rnf4-201ENSMUST00000030992 Serp2Q6TAW2 65 aa8.23□□□□□ -1.09
Rnf4-201ENSMUST00000030992 Dmac1Q9CQ00 111 aa8.23□□□□□ -1.09
Rnf4-201ENSMUST00000030992 Spata3Q9D9T6 193 aa8.23□□□□□ -1.09
Rnf4-201ENSMUST00000030992 MplkipQ9D011 178 aa8.23□□□□□ -1.09
Rnf4-201ENSMUST00000030992 Dync2h1Q45VK7 4306 aa8.22□□□□□ -1.09
Rnf4-201ENSMUST00000030992 Wfdc6bF6ULY1 148 aa8.21□□□□□ -1.09
Rnf4-201ENSMUST00000030992 4930518I15RikQ3V2W7 57 aa8.21□□□□□ -1.09
Rnf4-201ENSMUST00000030992 Igkv1-110A0A0B4J1I0 119 aa8.2□□□□□ -1.1
Rnf4-201ENSMUST00000030992 Fam168bQ80XQ8 194 aa8.2□□□□□ -1.1
Rnf4-201ENSMUST00000030992 Gm17689B3GLJ4 109 aa8.2□□□□□ -1.1
Rnf4-201ENSMUST00000030992 D130052B06RikQ3UW13 202 aa8.2□□□□□ -1.1
Rnf4-201ENSMUST00000030992 Defb10Q8R2I8 73 aa8.2□□□□□ -1.1
Rnf4-201ENSMUST00000030992 Igkv1-122A0A140T8M9 119 aa8.19□□□□□ -1.1
Rnf4-201ENSMUST00000030992 Prol1E9PYQ4 312 aa8.19□□□□□ -1.1
Rnf4-201ENSMUST00000030992 AW011738F6S7Q2 159 aa8.19□□□□□ -1.1
Rnf4-201ENSMUST00000030992 A830005F24RikQ8BRT5 167 aa8.19□□□□□ -1.1
Rnf4-201ENSMUST00000030992 Fam229bQ8CF36 80 aa8.19□□□□□ -1.1
Rnf4-201ENSMUST00000030992 Igkv3-12A0A140T8P0 119 aa8.18□□□□□ -1.1
Rnf4-201ENSMUST00000030992 Gm3618D3Z4P5 127 aa8.18□□□□□ -1.1
Rnf4-201ENSMUST00000030992 Gm2916Q9D9B9 127 aa8.18□□□□□ -1.1
Rnf4-201ENSMUST00000030992 Naa38Q9D2U5 125 aa8.18□□□□□ -1.1
Rnf4-201ENSMUST00000030992 Tmem243B2RVB9 118 aa8.17□□□□□ -1.1
Rnf4-201ENSMUST00000030992 Defa4P28311 92 aa8.17□□□□□ -1.1
Rnf4-201ENSMUST00000030992 A930002H24RikQ8C8Y3 163 aa8.16□□□□□ -1.1
Rnf4-201ENSMUST00000030992 Defa7P50705 93 aa8.16□□□□□ -1.1
Rnf4-201ENSMUST00000030992 2310061N02RikQ9D6S9 174 aa8.16□□□□□ -1.1
Rnf4-201ENSMUST00000030992 TnxbO35452 4006 aa8.16□□□□□ -1.1
Rnf4-201ENSMUST00000030992 Obox2E9PXV9 151 aa8.16□□□□□ -1.1
Rnf4-201ENSMUST00000030992 Gm20726G3UX18 150 aa8.15□□□□□ -1.1
Rnf4-201ENSMUST00000030992 Sprr2jO70561 109 aa8.15□□□□□ -1.11
Rnf4-201ENSMUST00000030992 Cox6a2P43023 97 aa8.14□□□□□ -1.11
Rnf4-201ENSMUST00000030992 A0A286YE02 88 aa8.13□□□□□ -1.11
Rnf4-201ENSMUST00000030992 Scgb1b2O35176 93 aa8.13□□□□□ -1.11
Rnf4-201ENSMUST00000030992 A330070K13RikQ8CA53 115 aa8.13□□□□□ -1.11
Rnf4-201ENSMUST00000030992 Ndufc1Q9CQY9 76 aa8.13□□□□□ -1.11
Rnf4-201ENSMUST00000030992 Sfta2E9PXB6 77 aa8.12□□□□□ -1.11
Rnf4-201ENSMUST00000030992 BaalcQ8VHV1 145 aa8.12□□□□□ -1.11
Rnf4-201ENSMUST00000030992 Igkv3-2A0A075B5P0 119 aa8.11□□□□□ -1.11
Rnf4-201ENSMUST00000030992 Gm11011D3Z3L9 86 aa8.11□□□□□ -1.11
Rnf4-201ENSMUST00000030992 P06320 134 aa8.11□□□□□ -1.11
Rnf4-201ENSMUST00000030992 Fam19a3Q7TPG6 132 aa8.11□□□□□ -1.11
Rnf4-201ENSMUST00000030992 Vpreb1P13372 142 aa8.11□□□□□ -1.11
Rnf4-201ENSMUST00000030992 Defa21Q8C1P2 93 aa8.11□□□□□ -1.11
Rnf4-201ENSMUST00000030992 Fam19a5Q91WE9 132 aa8.11□□□□□ -1.11
Rnf4-201ENSMUST00000030992 Fam104aA2A6P4 185 aa8.09□□□□□ -1.11
Rnf4-201ENSMUST00000030992 U90926O08546 118 aa8.09□□□□□ -1.11
Rnf4-201ENSMUST00000030992 GhrhP16043 103 aa8.09□□□□□ -1.11
Rnf4-201ENSMUST00000030992 Huwe1Q7TMY8 4377 aaKnown RBP8.09□□□□□ -1.11
Rnf4-201ENSMUST00000030992 Vpreb3D3Z6J4 130 aa8.08□□□□□ -1.12
Rnf4-201ENSMUST00000030992 PscaP57096 123 aa8.08□□□□□ -1.12
Rnf4-201ENSMUST00000030992 Gm37389A0A0A6YW05 95 aa8.07□□□□□ -1.12
Rnf4-201ENSMUST00000030992 Tmem258P61166 79 aa8.07□□□□□ -1.12
Rnf4-201ENSMUST00000030992 SvipQ3UZP4 77 aa8.07□□□□□ -1.12
Rnf4-201ENSMUST00000030992 Defb40Q70KL2 73 aa8.07□□□□□ -1.12
Rnf4-201ENSMUST00000030992 Gm9508A0A1W2P7W0 230 aa8.06□□□□□ -1.12
Rnf4-201ENSMUST00000030992 Defa23Q5G866 93 aa8.06□□□□□ -1.12
Rnf4-201ENSMUST00000030992 B9d2Q3UK10 175 aa8.06□□□□□ -1.12
Rnf4-201ENSMUST00000030992 Megf8P60882 2789 aa8.05□□□□□ -1.12
Retrieved 100 of 22,080 RNA–protein pairs in 78.1 ms