RNA–Protein interactions for RNA: ENSMUST00000028288.4

Notch1-201, Transcript of Neurogenic locus notch homolog protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Notch1, Length 9,488 nt, Biotype protein coding, Subcellular localisation Axon .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Notch1-201ENSMUST00000028288 Krtap16-1A2A5X5 502 aa9.3□□□□□ -0.92
Notch1-201ENSMUST00000028288 MobpQ9D2P8 170 aa9.29□□□□□ -0.92
Notch1-201ENSMUST00000028288 Srsf12Q8C8K3 266 aa9.29□□□□□ -0.92
Notch1-201ENSMUST00000028288 Gm10770F7D043 238 aa9.27□□□□□ -0.92
Notch1-201ENSMUST00000028288 Gm44790A0A0N4SV91 103 aa9.27□□□□□ -0.93
Notch1-201ENSMUST00000028288 Rps28P62858 69 aaKnown RBP9.26□□□□□ -0.93
Notch1-201ENSMUST00000028288 Prr13Q9CQJ5 137 aa9.25□□□□□ -0.93
Notch1-201ENSMUST00000028288 Nsd1O88491 2588 aaKnown RBP9.25□□□□□ -0.93
Notch1-201ENSMUST00000028288 FlnbQ80X90 2602 aaKnown RBP9.24□□□□□ -0.93
Notch1-201ENSMUST00000028288 AI606181Q8C7B9 129 aa9.24□□□□□ -0.93
Notch1-201ENSMUST00000028288 Gm9903Q8C9Y8 129 aa9.24□□□□□ -0.93
Notch1-201ENSMUST00000028288 E130208F15RikQ3UPV3 143 aa9.24□□□□□ -0.93
Notch1-201ENSMUST00000028288 Gm10999F6Q4M4 69 aa9.23□□□□□ -0.93
Notch1-201ENSMUST00000028288 Snhg11Q4G0K9 87 aa9.22□□□□□ -0.93
Notch1-201ENSMUST00000028288 Gm16181B0V2H2 73 aa9.21□□□□□ -0.93
Notch1-201ENSMUST00000028288 Fn1P11276 2477 aaKnown RBP9.21□□□□□ -0.93
Notch1-201ENSMUST00000028288 Gm12216A0A1W2P827 62 aa9.21□□□□□ -0.94
Notch1-201ENSMUST00000028288 Gm17689B3GLJ4 109 aa9.2□□□□□ -0.94
Notch1-201ENSMUST00000028288 Gm10308Q9CVR5 141 aa9.2□□□□□ -0.94
Notch1-201ENSMUST00000028288 Znf414Q9DCK4 299 aa9.19□□□□□ -0.94
Notch1-201ENSMUST00000028288 Gm10772F7AIG4 85 aa9.19□□□□□ -0.94
Notch1-201ENSMUST00000028288 Notch1Q01705 2531 aa9.18□□□□□ -0.94
Notch1-201ENSMUST00000028288 A930002H24RikQ8C8Y3 163 aa9.18□□□□□ -0.94
Notch1-201ENSMUST00000028288 Krtap24-1G3X9A2 248 aa9.18□□□□□ -0.94
Notch1-201ENSMUST00000028288 Tnrc18Q80WC3 2878 aa9.18□□□□□ -0.94
Notch1-201ENSMUST00000028288 Defb50Q6TU36 73 aa9.17□□□□□ -0.94
Notch1-201ENSMUST00000028288 7530416G11RikJ3QJX6 159 aa9.16□□□□□ -0.94
Notch1-201ENSMUST00000028288 Rpl37aP61514 92 aa9.16□□□□□ -0.94
Notch1-201ENSMUST00000028288 Limd2Q8BGB5 128 aa9.16□□□□□ -0.94
Notch1-201ENSMUST00000028288 Fam168bQ80XQ8 194 aa9.15□□□□□ -0.94
Notch1-201ENSMUST00000028288 Krtap26-1Q9D7N2 215 aa9.15□□□□□ -0.94
Notch1-201ENSMUST00000028288 Gm20661K7N787 53 aa9.15□□□□□ -0.95
Notch1-201ENSMUST00000028288 Phf5aP83870 110 aaKnown RBP9.15□□□□□ -0.95
Notch1-201ENSMUST00000028288 Defb1P56386 69 aa9.14□□□□□ -0.95
Notch1-201ENSMUST00000028288 Prune2Q52KR3 3084 aa9.14□□□□□ -0.95
Notch1-201ENSMUST00000028288 Gm26661M0QWV4 156 aa9.14□□□□□ -0.95
Notch1-201ENSMUST00000028288 Prol1E9PYQ4 312 aa9.12□□□□□ -0.95
Notch1-201ENSMUST00000028288 Gpr15lA0A0B4J1N3 78 aa9.12□□□□□ -0.95
Notch1-201ENSMUST00000028288 Q8BT88 171 aa9.1□□□□□ -0.95
Notch1-201ENSMUST00000028288 Coa5Q99M07 74 aa9.1□□□□□ -0.95
Notch1-201ENSMUST00000028288 Psors1c2Q80ZC9 134 aa9.09□□□□□ -0.95
Notch1-201ENSMUST00000028288 Spaca4Q80ZQ0 127 aa9.09□□□□□ -0.95
Notch1-201ENSMUST00000028288 Krtap11-1E9Q2E9 183 aa9.09□□□□□ -0.95
Notch1-201ENSMUST00000028288 Bod1lE9Q6J5 3032 aa9.08□□□□□ -0.96
Notch1-201ENSMUST00000028288 Stab1Q8R4Y4 2571 aa9.08□□□□□ -0.96
Notch1-201ENSMUST00000028288 TrioQ0KL02 3102 aa9.07□□□□□ -0.96
Notch1-201ENSMUST00000028288 Gm27235Q3UW50 83 aa9.07□□□□□ -0.96
Notch1-201ENSMUST00000028288 Cdc42se1Q8BHL7 80 aa9.06□□□□□ -0.96
Notch1-201ENSMUST00000028288 Gm10837Q3UTT8 145 aa9.06□□□□□ -0.96
Notch1-201ENSMUST00000028288 4930507D05RikQ8C9C9 103 aa9.06□□□□□ -0.96
Notch1-201ENSMUST00000028288 Lama3Q61789 3330 aa9.06□□□□□ -0.96
Notch1-201ENSMUST00000028288 Defb11Q8R2I7 77 aa9.05□□□□□ -0.96
Notch1-201ENSMUST00000028288 Eif4ebp3Q80VV3 101 aa9.04□□□□□ -0.96
Notch1-201ENSMUST00000028288 Gm5617Q91VN2 117 aa9.03□□□□□ -0.96
Notch1-201ENSMUST00000028288 Hectd1Q69ZR2 2618 aaKnown RBP9.02□□□□□ -0.97
Notch1-201ENSMUST00000028288 Q8BGJ3 129 aa9.02□□□□□ -0.97
Notch1-201ENSMUST00000028288 AplnQ9R0R4 77 aa9.02□□□□□ -0.97
Notch1-201ENSMUST00000028288 Chd6A3KFM7 2711 aa9□□□□□ -0.97
Notch1-201ENSMUST00000028288 Itpr1P11881 2749 aa8.99□□□□□ -0.97
Notch1-201ENSMUST00000028288 Gm3250E9Q1M3 230 aa8.99□□□□□ -0.97
Notch1-201ENSMUST00000028288 RetnlbQ99P86 105 aa8.97□□□□□ -0.97
Notch1-201ENSMUST00000028288 AY074887Q8R5F9 132 aa8.96□□□□□ -0.97
Notch1-201ENSMUST00000028288 Sprr4Q8CGN8 76 aa8.96□□□□□ -0.98
Notch1-201ENSMUST00000028288 Ranbp2Q9ERU9 3053 aaKnown RBP8.96□□□□□ -0.98
Notch1-201ENSMUST00000028288 Lama2Q60675 3118 aaKnown RBP8.94□□□□□ -0.98
Notch1-201ENSMUST00000028288 Phxr5P08399 672 aa8.94□□□□□ -0.98
Notch1-201ENSMUST00000028288 Mp68P56379 58 aa8.94□□□□□ -0.98
Notch1-201ENSMUST00000028288 Mast4Q811L6 2618 aa8.93□□□□□ -0.98
Notch1-201ENSMUST00000028288 Phxr4P15974 95 aa8.93□□□□□ -0.98
Notch1-201ENSMUST00000028288 A330070K13RikQ8CA53 115 aa8.92□□□□□ -0.98
Notch1-201ENSMUST00000028288 Gm7276Q3TYW4 209 aa8.91□□□□□ -0.98
Notch1-201ENSMUST00000028288 1810062G17RikG3X8Y2 129 aa8.91□□□□□ -0.98
Notch1-201ENSMUST00000028288 Ash1lQ99MY8 2958 aa8.91□□□□□ -0.98
Notch1-201ENSMUST00000028288 Uqcr11Q9CPX8 56 aa8.9□□□□□ -0.98
Notch1-201ENSMUST00000028288 Chd7A2AJK6 2986 aaKnown RBP8.9□□□□□ -0.98
Notch1-201ENSMUST00000028288 Itpr3P70227 2670 aa8.9□□□□□ -0.99
Notch1-201ENSMUST00000028288 Sprr1bQ62267 153 aa8.89□□□□□ -0.99
Notch1-201ENSMUST00000028288 Spata3Q9D9T6 193 aa8.88□□□□□ -0.99
Notch1-201ENSMUST00000028288 C530025M09RikF6RGA8 229 aa8.87□□□□□ -0.99
Notch1-201ENSMUST00000028288 NipblQ6KCD5 2798 aaKnown RBP8.86□□□□□ -0.99
Notch1-201ENSMUST00000028288 Lypd5Q9D7Z7 256 aa8.85□□□□□ -0.99
Notch1-201ENSMUST00000028288 Mki67E9PVX6 3177 aaKnown RBP8.85□□□□□ -0.99
Notch1-201ENSMUST00000028288 Fbn2Q61555 2907 aa8.84□□□□□ -0.99
Notch1-201ENSMUST00000028288 Dmxl1Q6PNC0 3013 aa8.84□□□□□ -0.99
Notch1-201ENSMUST00000028288 Tep1P97499 2629 aa8.82□□□□□ -1
Notch1-201ENSMUST00000028288 Gm10643Q3URG9 111 aa8.81□□□□□ -1
Notch1-201ENSMUST00000028288 Usp34Q6ZQ93 3582 aa8.8□□□□□ -1
Notch1-201ENSMUST00000028288 Fam229bQ8CF36 80 aa8.8□□□□□ -1
Notch1-201ENSMUST00000028288 Gm7173A0A0G2JEB6 3132 aa8.8□□□□□ -1
Notch1-201ENSMUST00000028288 Col6a5A6H584 2640 aa8.79□□□□□ -1
Notch1-201ENSMUST00000028288 Cypt15B1AXS0 87 aa8.78□□□□□ -1
Notch1-201ENSMUST00000028288 MgaA2AWL7 3003 aaKnown RBP8.77□□□□□ -1.01
Notch1-201ENSMUST00000028288 Defb9Q8R2I6 67 aa8.77□□□□□ -1.01
Notch1-201ENSMUST00000028288 Chtf8P0CG14 533 aa8.76□□□□□ -1.01
Notch1-201ENSMUST00000028288 KalrnA2CG49 2964 aa8.75□□□□□ -1.01
Notch1-201ENSMUST00000028288 Rev3lQ61493 3122 aa8.75□□□□□ -1.01
Notch1-201ENSMUST00000028288 AW011738F6S7Q2 159 aa8.75□□□□□ -1.01
Notch1-201ENSMUST00000028288 Nbeal2Q6ZQA0 2742 aa8.75□□□□□ -1.01
Notch1-201ENSMUST00000028288 Rnase13Q5GAM7 153 aa8.75□□□□□ -1.01
Notch1-201ENSMUST00000028288 Anapc11Q9CPX9 84 aa8.74□□□□□ -1.01
Retrieved 100 of 22,080 RNA–protein pairs in 56.6 ms