RNA–Protein interactions for RNA: ENSMUST00000027127.13

Sf3b1-201, Transcript of Splicing factor 3B subunit 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sf3b1, Length 6,195 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b1-201ENSMUST00000027127 Sprr2jO70561 109 aa5.77□□□□□ -1.49
Sf3b1-201ENSMUST00000027127 Ash1lQ99MY8 2958 aa5.77□□□□□ -1.49
Sf3b1-201ENSMUST00000027127 Snhg11Q4G0K9 87 aa5.76□□□□□ -1.49
Sf3b1-201ENSMUST00000027127 Eif4ebp3Q80VV3 101 aa5.76□□□□□ -1.49
Sf3b1-201ENSMUST00000027127 Trank1Q8BV79 2999 aa5.76□□□□□ -1.49
Sf3b1-201ENSMUST00000027127 Dmxl2Q8BPN8 3032 aa5.76□□□□□ -1.49
Sf3b1-201ENSMUST00000027127 Gm10267M0QWD8 85 aa5.76□□□□□ -1.49
Sf3b1-201ENSMUST00000027127 Ifitm6A0A1B0GS75 124 aa5.75□□□□□ -1.49
Sf3b1-201ENSMUST00000027127 1600014C23RikQ9DAX4 101 aa5.75□□□□□ -1.49
Sf3b1-201ENSMUST00000027127 Spata3Q9D9T6 193 aa5.75□□□□□ -1.49
Sf3b1-201ENSMUST00000027127 Wfdc17Q5SSJ1 76 aa5.75□□□□□ -1.49
Sf3b1-201ENSMUST00000027127 Zzef1Q5SSH7 2924 aa5.74□□□□□ -1.49
Sf3b1-201ENSMUST00000027127 Setd2E9Q5F9 2537 aa5.74□□□□□ -1.49
Sf3b1-201ENSMUST00000027127 Gm16485Q8C4B7 115 aa5.74□□□□□ -1.49
Sf3b1-201ENSMUST00000027127 VcanQ62059 3357 aa5.74□□□□□ -1.49
Sf3b1-201ENSMUST00000027127 DspE9Q557 2883 aaKnown RBP5.73□□□□□ -1.49
Sf3b1-201ENSMUST00000027127 Ighv2-5A0A0A6YY69 116 aa5.73□□□□□ -1.49
Sf3b1-201ENSMUST00000027127 Myo18bE9PV66 2605 aa5.73□□□□□ -1.49
Sf3b1-201ENSMUST00000027127 Kmt2bO08550 2713 aa5.73□□□□□ -1.49
Sf3b1-201ENSMUST00000027127 A730009L09RikA0A1B0GS82 72 aa5.73□□□□□ -1.49
Sf3b1-201ENSMUST00000027127 Col6a3E9PWQ3 3284 aa5.72□□□□□ -1.49
Sf3b1-201ENSMUST00000027127 NbeaQ9EPN1 2936 aa5.72□□□□□ -1.49
Sf3b1-201ENSMUST00000027127 Gm17606F6ZL36 78 aa5.72□□□□□ -1.49
Sf3b1-201ENSMUST00000027127 AW011738F6S7Q2 159 aa5.72□□□□□ -1.49
Sf3b1-201ENSMUST00000027127 Krtap11-1E9Q2E9 183 aa5.71□□□□□ -1.49
Sf3b1-201ENSMUST00000027127 Myo15aQ9QZZ4 3511 aa5.71□□□□□ -1.49
Sf3b1-201ENSMUST00000027127 Gm11627A6PWP4 55 aa5.71□□□□□ -1.5
Sf3b1-201ENSMUST00000027127 Gm10337F7DEP7 55 aa5.71□□□□□ -1.5
Sf3b1-201ENSMUST00000027127 Usp9yF8VPU6 2556 aa5.71□□□□□ -1.5
Sf3b1-201ENSMUST00000027127 Ntn5Q3UQ22 452 aa5.7□□□□□ -1.5
Sf3b1-201ENSMUST00000027127 Defb38Q7TNV7 63 aa5.7□□□□□ -1.5
Sf3b1-201ENSMUST00000027127 Elof1P60003 83 aa5.7□□□□□ -1.5
Sf3b1-201ENSMUST00000027127 AplnQ9R0R4 77 aa5.7□□□□□ -1.5
Sf3b1-201ENSMUST00000027127 C530025M09RikF6RGA8 229 aa5.69□□□□□ -1.5
Sf3b1-201ENSMUST00000027127 Gm19935A0A1B0GSF9 52 aa5.69□□□□□ -1.5
Sf3b1-201ENSMUST00000027127 Muc2Q80Z19 2680 aa5.69□□□□□ -1.5
Sf3b1-201ENSMUST00000027127 Mast4Q811L6 2618 aa5.68□□□□□ -1.5
Sf3b1-201ENSMUST00000027127 Gm11213A0A1B0GR83 88 aa5.68□□□□□ -1.5
Sf3b1-201ENSMUST00000027127 Cd164Q9R0L9 197 aa5.68□□□□□ -1.5
Sf3b1-201ENSMUST00000027127 Msrb1Q9JLC3 116 aa5.68□□□□□ -1.5
Sf3b1-201ENSMUST00000027127 RelnQ60841 3461 aa5.68□□□□□ -1.5
Sf3b1-201ENSMUST00000027127 6430550D23RikE9Q1X6 194 aa5.68□□□□□ -1.5
Sf3b1-201ENSMUST00000027127 AY074887Q8R5F9 132 aa5.68□□□□□ -1.5
Sf3b1-201ENSMUST00000027127 Ighv2-2A0A075B5P8 116 aa5.67□□□□□ -1.5
Sf3b1-201ENSMUST00000027127 P01821 116 aa5.67□□□□□ -1.5
Sf3b1-201ENSMUST00000027127 Q9DAA7 145 aa5.67□□□□□ -1.5
Sf3b1-201ENSMUST00000027127 2310034G01RikA0A286YDL3 209 aa5.67□□□□□ -1.5
Sf3b1-201ENSMUST00000027127 Gm3233E9Q2H5 230 aa5.67□□□□□ -1.5
Sf3b1-201ENSMUST00000027127 Sprr4Q8CGN8 76 aa5.67□□□□□ -1.5
Sf3b1-201ENSMUST00000027127 Tep1P97499 2629 aa5.67□□□□□ -1.5
Sf3b1-201ENSMUST00000027127 Phxr5P08399 672 aa5.67□□□□□ -1.5
Sf3b1-201ENSMUST00000027127 Adgrg4B7ZCC9 3073 aa5.67□□□□□ -1.5
Sf3b1-201ENSMUST00000027127 Zfhx4Q9JJN2 3550 aa5.67□□□□□ -1.5
Sf3b1-201ENSMUST00000027127 CnbpP53996 178 aaKnown RBP5.66□□□□□ -1.5
Sf3b1-201ENSMUST00000027127 Defb39Q70KL3 74 aa5.66□□□□□ -1.5
Sf3b1-201ENSMUST00000027127 Hivep3A2A884 2348 aa5.66□□□□□ -1.5
Sf3b1-201ENSMUST00000027127 1810062G17RikG3X8Y2 129 aa5.66□□□□□ -1.5
Sf3b1-201ENSMUST00000027127 Dmac1Q9CQ00 111 aa5.66□□□□□ -1.5
Sf3b1-201ENSMUST00000027127 Gm884A2A9H6 3643 aa5.65□□□□□ -1.51
Sf3b1-201ENSMUST00000027127 Igkv8-27A0A0G2JF28 120 aa5.65□□□□□ -1.51
Sf3b1-201ENSMUST00000027127 Prol1E9PYQ4 312 aa5.65□□□□□ -1.51
Sf3b1-201ENSMUST00000027127 Gm10770F7D043 238 aa5.65□□□□□ -1.51
Sf3b1-201ENSMUST00000027127 Gm10308Q9CVR5 141 aa5.65□□□□□ -1.51
Sf3b1-201ENSMUST00000027127 SpegQ62407 3262 aa5.64□□□□□ -1.51
Sf3b1-201ENSMUST00000027127 4930519P11RikQ9CUJ8 166 aa5.64□□□□□ -1.51
Sf3b1-201ENSMUST00000027127 NipblQ6KCD5 2798 aaKnown RBP5.64□□□□□ -1.51
Sf3b1-201ENSMUST00000027127 UqcrqQ9CQ69 82 aa5.64□□□□□ -1.51
Sf3b1-201ENSMUST00000027127 Gm28230A0A0A0MQ91 144 aa5.64□□□□□ -1.51
Sf3b1-201ENSMUST00000027127 Gm12216A0A1W2P827 62 aa5.64□□□□□ -1.51
Sf3b1-201ENSMUST00000027127 Fam19a3Q7TPG6 132 aa5.63□□□□□ -1.51
Sf3b1-201ENSMUST00000027127 CicQ924A2 2510 aa5.63□□□□□ -1.51
Sf3b1-201ENSMUST00000027127 Utp20Q5XG71 2788 aaKnown RBP5.63□□□□□ -1.51
Sf3b1-201ENSMUST00000027127 Gm10570F6VB42 170 aa5.63□□□□□ -1.51
Sf3b1-201ENSMUST00000027127 Gm7276Q3TYW4 209 aa5.62□□□□□ -1.51
Sf3b1-201ENSMUST00000027127 Znf414Q9DCK4 299 aa5.62□□□□□ -1.51
Sf3b1-201ENSMUST00000027127 Dchs1E9PVD3 3291 aa5.62□□□□□ -1.51
Sf3b1-201ENSMUST00000027127 Bean1Q9EQG5 255 aa5.61□□□□□ -1.51
Sf3b1-201ENSMUST00000027127 Chchd10Q7TNL9 138 aa5.61□□□□□ -1.51
Sf3b1-201ENSMUST00000027127 Defb11Q8R2I7 77 aa5.61□□□□□ -1.51
Sf3b1-201ENSMUST00000027127 Chd6A3KFM7 2711 aa5.6□□□□□ -1.51
Sf3b1-201ENSMUST00000027127 FlncQ8VHX6 2726 aaKnown RBP5.6□□□□□ -1.51
Sf3b1-201ENSMUST00000027127 Gm5617Q91VN2 117 aa5.6□□□□□ -1.51
Sf3b1-201ENSMUST00000027127 Cox6a2P43023 97 aa5.6□□□□□ -1.51
Sf3b1-201ENSMUST00000027127 Dmbt1Q60997 2085 aa5.58□□□□□ -1.52
Sf3b1-201ENSMUST00000027127 Akap9Q70FJ1 3797 aa5.58□□□□□ -1.52
Sf3b1-201ENSMUST00000027127 Defb37Q7TMD2 62 aa5.57□□□□□ -1.52
Sf3b1-201ENSMUST00000027127 Krtap16-1A2A5X5 502 aa5.57□□□□□ -1.52
Sf3b1-201ENSMUST00000027127 4930518I15RikQ3V2W7 57 aa5.57□□□□□ -1.52
Sf3b1-201ENSMUST00000027127 Reg3aO09037 175 aa5.55□□□□□ -1.52
Sf3b1-201ENSMUST00000027127 A930002H24RikQ8C8Y3 163 aa5.55□□□□□ -1.52
Sf3b1-201ENSMUST00000027127 Prr13Q9CQJ5 137 aa5.55□□□□□ -1.52
Sf3b1-201ENSMUST00000027127 Gm10160F6Y577 67 aa5.54□□□□□ -1.52
Sf3b1-201ENSMUST00000027127 Gm10642Q3TWM1 71 aa5.54□□□□□ -1.52
Sf3b1-201ENSMUST00000027127 Gm20538F6Z9R1 75 aa5.54□□□□□ -1.52
Sf3b1-201ENSMUST00000027127 Coa6Q8BGD8 79 aa5.54□□□□□ -1.52
Sf3b1-201ENSMUST00000027127 Notch2O35516 2470 aa5.54□□□□□ -1.52
Sf3b1-201ENSMUST00000027127 Gm10837Q3UTT8 145 aa5.54□□□□□ -1.52
Sf3b1-201ENSMUST00000027127 Mrpl34Q99N91 92 aa5.53□□□□□ -1.52
Sf3b1-201ENSMUST00000027127 AI606181Q8C7B9 129 aa5.52□□□□□ -1.53
Sf3b1-201ENSMUST00000027127 7530416G11RikJ3QJX6 159 aa5.52□□□□□ -1.53
Retrieved 100 of 22,080 RNA–protein pairs in 44.6 ms