RNA–Protein interactions for RNA: ENSMUST00000005749.5

Ctr9-201, Transcript of RNA polymerase-associated protein CTR9 homolog, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ctr9, Length 4,300 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctr9-201ENSMUST00000005749 Cd164Q9R0L9 197 aa8.23□□□□□ -1.09
Ctr9-201ENSMUST00000005749 4930519P11RikQ9CUJ8 166 aa8.22□□□□□ -1.09
Ctr9-201ENSMUST00000005749 Tenm3Q9WTS6 2715 aa8.22□□□□□ -1.09
Ctr9-201ENSMUST00000005749 Gm10772F7AIG4 85 aa8.22□□□□□ -1.09
Ctr9-201ENSMUST00000005749 Wdr38Q9D994 303 aa8.22□□□□□ -1.09
Ctr9-201ENSMUST00000005749 EnhoQ8K1D8 76 aa8.22□□□□□ -1.09
Ctr9-201ENSMUST00000005749 4930524J08RikQ9CUJ5 163 aa8.21□□□□□ -1.1
Ctr9-201ENSMUST00000005749 Vpreb3D3Z6J4 130 aa8.21□□□□□ -1.1
Ctr9-201ENSMUST00000005749 Gm43218A0A0G2JGT0 114 aa8.2□□□□□ -1.1
Ctr9-201ENSMUST00000005749 Defb39Q70KL3 74 aa8.2□□□□□ -1.1
Ctr9-201ENSMUST00000005749 Helz2E9QAM5 2947 aaKnown RBP8.2□□□□□ -1.1
Ctr9-201ENSMUST00000005749 Spink13Q3UTS8 97 aa8.2□□□□□ -1.1
Ctr9-201ENSMUST00000005749 Gm10135F6TEE5 83 aa8.2□□□□□ -1.1
Ctr9-201ENSMUST00000005749 AI854703Q8BIN3 203 aa8.2□□□□□ -1.1
Ctr9-201ENSMUST00000005749 Ighv1-56A0A0A6YXG2 117 aa8.19□□□□□ -1.1
Ctr9-201ENSMUST00000005749 Pde6gP09174 87 aa8.19□□□□□ -1.1
Ctr9-201ENSMUST00000005749 Gm10837Q3UTT8 145 aa8.19□□□□□ -1.1
Ctr9-201ENSMUST00000005749 Spink8Q09TK9 105 aa8.19□□□□□ -1.1
Ctr9-201ENSMUST00000005749 Gm5153P01627 120 aa8.18□□□□□ -1.1
Ctr9-201ENSMUST00000005749 Sostdc1Q9CQN4 206 aa8.18□□□□□ -1.1
Ctr9-201ENSMUST00000005749 Ifitm6A0A1B0GS75 124 aa8.17□□□□□ -1.1
Ctr9-201ENSMUST00000005749 Pet100P0DJE0 76 aa8.17□□□□□ -1.1
Ctr9-201ENSMUST00000005749 Igkv3-12A0A140T8P0 119 aa8.17□□□□□ -1.1
Ctr9-201ENSMUST00000005749 Gm10845Q3UNY9 185 aa8.17□□□□□ -1.1
Ctr9-201ENSMUST00000005749 Q8K1L6 76 aa8.17□□□□□ -1.1
Ctr9-201ENSMUST00000005749 Defb38Q7TNV7 63 aa8.16□□□□□ -1.1
Ctr9-201ENSMUST00000005749 Q9DAA7 145 aa8.16□□□□□ -1.1
Ctr9-201ENSMUST00000005749 AplnQ9R0R4 77 aa8.16□□□□□ -1.1
Ctr9-201ENSMUST00000005749 Gm10642Q3TWM1 71 aa8.16□□□□□ -1.1
Ctr9-201ENSMUST00000005749 Srrm2Q8BTI8 2703 aaKnown RBP8.15□□□□□ -1.1
Ctr9-201ENSMUST00000005749 Gm11565A2A4M7 156 aa8.15□□□□□ -1.1
Ctr9-201ENSMUST00000005749 Krtap11-1E9Q2E9 183 aa8.14□□□□□ -1.11
Ctr9-201ENSMUST00000005749 CenpwQ3URR0 86 aa8.13□□□□□ -1.11
Ctr9-201ENSMUST00000005749 6430550D23RikE9Q1X6 194 aa8.13□□□□□ -1.11
Ctr9-201ENSMUST00000005749 Gm884A2A9H6 3643 aa8.13□□□□□ -1.11
Ctr9-201ENSMUST00000005749 RetnlbQ99P86 105 aa8.12□□□□□ -1.11
Ctr9-201ENSMUST00000005749 Phf5aP83870 110 aaKnown RBP8.12□□□□□ -1.11
Ctr9-201ENSMUST00000005749 Ntn5Q3UQ22 452 aa8.12□□□□□ -1.11
Ctr9-201ENSMUST00000005749 Gm10549Q3URY4 149 aa8.12□□□□□ -1.11
Ctr9-201ENSMUST00000005749 Plac8Q9JI48 112 aa8.11□□□□□ -1.11
Ctr9-201ENSMUST00000005749 Zfhx3Q61329 3726 aa8.1□□□□□ -1.11
Ctr9-201ENSMUST00000005749 Vpreb2P13373 142 aa8.1□□□□□ -1.11
Ctr9-201ENSMUST00000005749 GhrhP16043 103 aa8.1□□□□□ -1.11
Ctr9-201ENSMUST00000005749 Zfhx4Q9JJN2 3550 aa8.1□□□□□ -1.11
Ctr9-201ENSMUST00000005749 P84750 121 aa8.1□□□□□ -1.11
Ctr9-201ENSMUST00000005749 Znf706Q9D115 76 aaKnown RBP8.09□□□□□ -1.11
Ctr9-201ENSMUST00000005749 OtogO55225 2910 aa8.09□□□□□ -1.11
Ctr9-201ENSMUST00000005749 Fam168bQ80XQ8 194 aa8.09□□□□□ -1.11
Ctr9-201ENSMUST00000005749 Pcp4P63054 62 aa8.08□□□□□ -1.12
Ctr9-201ENSMUST00000005749 SpenQ62504 3644 aaKnown RBP8.08□□□□□ -1.12
Ctr9-201ENSMUST00000005749 Igkv8-30A0A140T8M3 121 aa8.07□□□□□ -1.12
Ctr9-201ENSMUST00000005749 C130032M10RikQ8C888 123 aa8.07□□□□□ -1.12
Ctr9-201ENSMUST00000005749 Znf414Q9DCK4 299 aa8.06□□□□□ -1.12
Ctr9-201ENSMUST00000005749 Vps13cQ8BX70 3748 aa8.06□□□□□ -1.12
Ctr9-201ENSMUST00000005749 Igkv3-7A0A0G2JE31 119 aa8.06□□□□□ -1.12
Ctr9-201ENSMUST00000005749 Gm10267M0QWD8 85 aa8.06□□□□□ -1.12
Ctr9-201ENSMUST00000005749 Msrb1Q9JLC3 116 aa8.05□□□□□ -1.12
Ctr9-201ENSMUST00000005749 Smg1Q8BKX6 3658 aaKnown RBP8.05□□□□□ -1.12
Ctr9-201ENSMUST00000005749 Wfdc6bF6ULY1 148 aa8.05□□□□□ -1.12
Ctr9-201ENSMUST00000005749 Gm9508A0A1W2P7W0 230 aa8.04□□□□□ -1.12
Ctr9-201ENSMUST00000005749 Gm11627A6PWP4 55 aa8.04□□□□□ -1.12
Ctr9-201ENSMUST00000005749 P01819 144 aa8.04□□□□□ -1.12
Ctr9-201ENSMUST00000005749 Brk1Q91VR8 75 aa8.04□□□□□ -1.12
Ctr9-201ENSMUST00000005749 Defb45Q3V490 66 aa8.04□□□□□ -1.12
Ctr9-201ENSMUST00000005749 Gm5617Q91VN2 117 aa8.04□□□□□ -1.12
Ctr9-201ENSMUST00000005749 Gm28230A0A0A0MQ91 144 aa8.03□□□□□ -1.12
Ctr9-201ENSMUST00000005749 Lama5Q61001 3718 aa8.03□□□□□ -1.12
Ctr9-201ENSMUST00000005749 1700018G05RikA0A1B0GSI2 66 aa8.02□□□□□ -1.13
Ctr9-201ENSMUST00000005749 Igkv8-28A0A0G2JE47 121 aa8.01□□□□□ -1.13
Ctr9-201ENSMUST00000005749 Sprr2jO70561 109 aa8□□□□□ -1.13
Ctr9-201ENSMUST00000005749 AI606181Q8C7B9 129 aa8□□□□□ -1.13
Ctr9-201ENSMUST00000005749 Reg3aO09037 175 aa8□□□□□ -1.13
Ctr9-201ENSMUST00000005749 Sprr4Q8CGN8 76 aa7.99□□□□□ -1.13
Ctr9-201ENSMUST00000005749 Phxr5P08399 672 aa7.99□□□□□ -1.13
Ctr9-201ENSMUST00000005749 2310034G01RikA0A286YDL3 209 aa7.99□□□□□ -1.13
Ctr9-201ENSMUST00000005749 Eif4ebp3Q80VV3 101 aa7.99□□□□□ -1.13
Ctr9-201ENSMUST00000005749 Mrpl52Q9D0Y8 121 aa7.99□□□□□ -1.13
Ctr9-201ENSMUST00000005749 Dmac1Q9CQ00 111 aa7.98□□□□□ -1.13
Ctr9-201ENSMUST00000005749 Gm17349F7BGH6 99 aa7.97□□□□□ -1.13
Ctr9-201ENSMUST00000005749 Spaca4Q80ZQ0 127 aa7.97□□□□□ -1.13
Ctr9-201ENSMUST00000005749 Tenm1Q9WTS4 2731 aa7.97□□□□□ -1.13
Ctr9-201ENSMUST00000005749 A0A286YE49 62 aa7.96□□□□□ -1.14
Ctr9-201ENSMUST00000005749 Atp5eP56382 52 aa7.95□□□□□ -1.14
Ctr9-201ENSMUST00000005749 ApcQ61315 2845 aa7.95□□□□□ -1.14
Ctr9-201ENSMUST00000005749 Mrpl55Q9CZ83 127 aa7.95□□□□□ -1.14
Ctr9-201ENSMUST00000005749 Gpr15lA0A0B4J1N3 78 aa7.94□□□□□ -1.14
Ctr9-201ENSMUST00000005749 Gm9903Q8C9Y8 129 aa7.94□□□□□ -1.14
Ctr9-201ENSMUST00000005749 Cox6a2P43023 97 aa7.94□□□□□ -1.14
Ctr9-201ENSMUST00000005749 Gm20604F8WIA3 75 aa7.93□□□□□ -1.14
Ctr9-201ENSMUST00000005749 Defb50Q6TU36 73 aa7.93□□□□□ -1.14
Ctr9-201ENSMUST00000005749 1700074P13RikQ9D9G7 251 aa7.93□□□□□ -1.14
Ctr9-201ENSMUST00000005749 Csmd1Q923L3 3564 aa7.92□□□□□ -1.14
Ctr9-201ENSMUST00000005749 Psors1c2Q80ZC9 134 aa7.92□□□□□ -1.14
Ctr9-201ENSMUST00000005749 Gm21886J3QJU9 214 aa7.91□□□□□ -1.14
Ctr9-201ENSMUST00000005749 Gm44790A0A0N4SV91 103 aa7.9□□□□□ -1.14
Ctr9-201ENSMUST00000005749 C530025M09RikF6RGA8 229 aa7.9□□□□□ -1.14
Ctr9-201ENSMUST00000005749 Elof1P60003 83 aa7.9□□□□□ -1.14
Ctr9-201ENSMUST00000005749 Pou2af1Q64693 256 aa7.9□□□□□ -1.14
Ctr9-201ENSMUST00000005749 Anapc11Q9CPX9 84 aa7.9□□□□□ -1.15
Ctr9-201ENSMUST00000005749 Apoc4Q61268 124 aa7.89□□□□□ -1.15
Retrieved 100 of 22,080 RNA–protein pairs in 36.7 ms