RNA–Protein interactions for RNA: ENSMUST00000005600.5

Rfx1-201, Transcript of MHC class II regulatory factor RFX1, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Rfx1, Length 4,172 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1-201ENSMUST00000005600 Pet100P0DJE0 76 aa8.13□□□□□ -1.11
Rfx1-201ENSMUST00000005600 Fam19a3Q7TPG6 132 aa8.13□□□□□ -1.11
Rfx1-201ENSMUST00000005600 Dph3Q8K0W9 82 aa8.13□□□□□ -1.11
Rfx1-201ENSMUST00000005600 PtprqP0C5E4 2300 aa8.12□□□□□ -1.11
Rfx1-201ENSMUST00000005600 Gm17689B3GLJ4 109 aa8.12□□□□□ -1.11
Rfx1-201ENSMUST00000005600 PolqQ8CGS6 2544 aa8.12□□□□□ -1.11
Rfx1-201ENSMUST00000005600 Igkv8-34A0A0G2JDU0 121 aa8.12□□□□□ -1.11
Rfx1-201ENSMUST00000005600 AY074887Q8R5F9 132 aa8.11□□□□□ -1.11
Rfx1-201ENSMUST00000005600 Gm10770F7D043 238 aa8.11□□□□□ -1.11
Rfx1-201ENSMUST00000005600 Serp1Q9Z1W5 66 aa8.11□□□□□ -1.11
Rfx1-201ENSMUST00000005600 2310034G01RikA0A286YDL3 209 aa8.1□□□□□ -1.11
Rfx1-201ENSMUST00000005600 Gm17509Q9CZ61 145 aa8.1□□□□□ -1.11
Rfx1-201ENSMUST00000005600 Igkv1-110A0A0B4J1I0 119 aa8.1□□□□□ -1.11
Rfx1-201ENSMUST00000005600 A830005F24RikQ8BRT5 167 aa8.1□□□□□ -1.11
Rfx1-201ENSMUST00000005600 Igkv1-122A0A140T8M9 119 aa8.1□□□□□ -1.11
Rfx1-201ENSMUST00000005600 Gm11213A0A1B0GR83 88 aa8.09□□□□□ -1.11
Rfx1-201ENSMUST00000005600 Sfta2E9PXB6 77 aa8.08□□□□□ -1.12
Rfx1-201ENSMUST00000005600 Camk2n2Q78WH7 79 aa8.08□□□□□ -1.12
Rfx1-201ENSMUST00000005600 Ighv2-2A0A075B5P8 116 aa8.08□□□□□ -1.12
Rfx1-201ENSMUST00000005600 P01821 116 aa8.08□□□□□ -1.12
Rfx1-201ENSMUST00000005600 Defb37Q7TMD2 62 aa8.08□□□□□ -1.12
Rfx1-201ENSMUST00000005600 Akap13E9Q394 2776 aa8.08□□□□□ -1.12
Rfx1-201ENSMUST00000005600 Ighv8-13A0A075B5Y0 101 aa8.08□□□□□ -1.12
Rfx1-201ENSMUST00000005600 Sec61gP60060 68 aa8.07□□□□□ -1.12
Rfx1-201ENSMUST00000005600 Cd164Q9R0L9 197 aa8.07□□□□□ -1.12
Rfx1-201ENSMUST00000005600 H2al1bA0A087WP11 105 aa8.07□□□□□ -1.12
Rfx1-201ENSMUST00000005600 H2al1kJ3QP08 105 aa8.07□□□□□ -1.12
Rfx1-201ENSMUST00000005600 A530084C06RikQ3UTW2 186 aa8.07□□□□□ -1.12
Rfx1-201ENSMUST00000005600 H2al1eQ810S6 105 aa8.07□□□□□ -1.12
Rfx1-201ENSMUST00000005600 H2al1mQ9DAD9 105 aa8.07□□□□□ -1.12
Rfx1-201ENSMUST00000005600 Igkv4-92A0A0B4J1I2 117 aa8.07□□□□□ -1.12
Rfx1-201ENSMUST00000005600 Elof1P60003 83 aa8.06□□□□□ -1.12
Rfx1-201ENSMUST00000005600 Bean1Q9EQG5 255 aa8.06□□□□□ -1.12
Rfx1-201ENSMUST00000005600 A730009L09RikA0A1B0GS82 72 aa8.05□□□□□ -1.12
Rfx1-201ENSMUST00000005600 Gm3250E9Q1M3 230 aa8.05□□□□□ -1.12
Rfx1-201ENSMUST00000005600 Reg3bP35230 175 aa8.04□□□□□ -1.12
Rfx1-201ENSMUST00000005600 A730071L15RikQ8C4X0 137 aa8.04□□□□□ -1.12
Rfx1-201ENSMUST00000005600 Igkv8-28A0A0G2JE47 121 aa8.03□□□□□ -1.12
Rfx1-201ENSMUST00000005600 A0A286YE02 88 aa8.03□□□□□ -1.12
Rfx1-201ENSMUST00000005600 P06320 134 aa8.03□□□□□ -1.12
Rfx1-201ENSMUST00000005600 Trav14-1A0A0G2JF94 121 aa8.03□□□□□ -1.12
Rfx1-201ENSMUST00000005600 Gm11011D3Z3L9 86 aa8.01□□□□□ -1.13
Rfx1-201ENSMUST00000005600 Pou2af1Q64693 256 aa8.01□□□□□ -1.13
Rfx1-201ENSMUST00000005600 Prr15lQ8JZM2 100 aa8.01□□□□□ -1.13
Rfx1-201ENSMUST00000005600 Spink8Q09TK9 105 aa8□□□□□ -1.13
Rfx1-201ENSMUST00000005600 Snhg11Q4G0K9 87 aa8□□□□□ -1.13
Rfx1-201ENSMUST00000005600 Vpreb2P13373 142 aa8□□□□□ -1.13
Rfx1-201ENSMUST00000005600 Sprr2jO70561 109 aa7.99□□□□□ -1.13
Rfx1-201ENSMUST00000005600 UqcrqQ9CQ69 82 aa7.99□□□□□ -1.13
Rfx1-201ENSMUST00000005600 A330070K13RikQ8CA53 115 aa7.97□□□□□ -1.13
Rfx1-201ENSMUST00000005600 Gm3233E9Q2H5 230 aa7.96□□□□□ -1.13
Rfx1-201ENSMUST00000005600 Mast4Q811L6 2618 aa7.96□□□□□ -1.14
Rfx1-201ENSMUST00000005600 Gm10570F6VB42 170 aa7.95□□□□□ -1.14
Rfx1-201ENSMUST00000005600 Gm7276Q3TYW4 209 aa7.95□□□□□ -1.14
Rfx1-201ENSMUST00000005600 Sprr4Q8CGN8 76 aa7.95□□□□□ -1.14
Rfx1-201ENSMUST00000005600 AtrQ9JKK8 2635 aa7.95□□□□□ -1.14
Rfx1-201ENSMUST00000005600 Gm10401E9Q3K6 71 aa7.94□□□□□ -1.14
Rfx1-201ENSMUST00000005600 CicQ924A2 2510 aa7.94□□□□□ -1.14
Rfx1-201ENSMUST00000005600 Igkv3-2A0A075B5P0 119 aa7.94□□□□□ -1.14
Rfx1-201ENSMUST00000005600 Tex15F8VPN2 2785 aa7.94□□□□□ -1.14
Rfx1-201ENSMUST00000005600 Xirp2Q4U4S6 3784 aa7.93□□□□□ -1.14
Rfx1-201ENSMUST00000005600 Cox6a2P43023 97 aa7.92□□□□□ -1.14
Rfx1-201ENSMUST00000005600 Ank2Q8C8R3 3898 aa7.92□□□□□ -1.14
Rfx1-201ENSMUST00000005600 Smim29Q8R043 75 aa7.92□□□□□ -1.14
Rfx1-201ENSMUST00000005600 Spint4Q9D263 159 aa7.9□□□□□ -1.14
Rfx1-201ENSMUST00000005600 Q8BT88 171 aa7.9□□□□□ -1.15
Rfx1-201ENSMUST00000005600 C130032M10RikQ8C888 123 aa7.9□□□□□ -1.15
Rfx1-201ENSMUST00000005600 Defb40Q70KL2 73 aa7.89□□□□□ -1.15
Rfx1-201ENSMUST00000005600 CubnQ9JLB4 3623 aa7.89□□□□□ -1.15
Rfx1-201ENSMUST00000005600 9230102O04RikA2ASX7 82 aa7.88□□□□□ -1.15
Rfx1-201ENSMUST00000005600 Gm17521F6QAC8 156 aa7.88□□□□□ -1.15
Rfx1-201ENSMUST00000005600 BsnO88737 3942 aa7.88□□□□□ -1.15
Rfx1-201ENSMUST00000005600 Mrpl34Q99N91 92 aa7.88□□□□□ -1.15
Rfx1-201ENSMUST00000005600 Nbeal2Q6ZQA0 2742 aa7.88□□□□□ -1.15
Rfx1-201ENSMUST00000005600 Gm5617Q91VN2 117 aa7.87□□□□□ -1.15
Rfx1-201ENSMUST00000005600 6430550D23RikE9Q1X6 194 aa7.87□□□□□ -1.15
Rfx1-201ENSMUST00000005600 Defb12Q8K4N3 78 aa7.87□□□□□ -1.15
Rfx1-201ENSMUST00000005600 Ube2bP63147 152 aa7.86□□□□□ -1.15
Rfx1-201ENSMUST00000005600 Dmac1Q9CQ00 111 aa7.86□□□□□ -1.15
Rfx1-201ENSMUST00000005600 Coa6Q8BGD8 79 aa7.85□□□□□ -1.15
Rfx1-201ENSMUST00000005600 Gm12353A2AGJ4 60 aa7.85□□□□□ -1.15
Rfx1-201ENSMUST00000005600 Obox2E9PXV9 151 aa7.85□□□□□ -1.15
Rfx1-201ENSMUST00000005600 Gm44790A0A0N4SV91 103 aa7.84□□□□□ -1.15
Rfx1-201ENSMUST00000005600 Igkv3-4A0A140T8Q4 119 aa7.83□□□□□ -1.16
Rfx1-201ENSMUST00000005600 Vpreb3D3Z6J4 130 aa7.83□□□□□ -1.16
Rfx1-201ENSMUST00000005600 PscaP57096 123 aa7.83□□□□□ -1.16
Rfx1-201ENSMUST00000005600 Gm16485Q8C4B7 115 aa7.83□□□□□ -1.16
Rfx1-201ENSMUST00000005600 Igkv8-19A0A0G2JFN8 121 aa7.82□□□□□ -1.16
Rfx1-201ENSMUST00000005600 AplnQ9R0R4 77 aa7.82□□□□□ -1.16
Rfx1-201ENSMUST00000005600 Notch1Q01705 2531 aa7.82□□□□□ -1.16
Rfx1-201ENSMUST00000005600 Gm11627A6PWP4 55 aa7.82□□□□□ -1.16
Rfx1-201ENSMUST00000005600 P84750 121 aa7.81□□□□□ -1.16
Rfx1-201ENSMUST00000005600 Fam168bQ80XQ8 194 aa7.81□□□□□ -1.16
Rfx1-201ENSMUST00000005600 ApcQ61315 2845 aa7.81□□□□□ -1.16
Rfx1-201ENSMUST00000005600 A930002H24RikQ8C8Y3 163 aa7.81□□□□□ -1.16
Rfx1-201ENSMUST00000005600 Col7a1Q63870 2944 aa7.81□□□□□ -1.16
Rfx1-201ENSMUST00000005600 FasnP19096 2504 aaKnown RBP7.81□□□□□ -1.16
Rfx1-201ENSMUST00000005600 Gm10197F6QEY5 67 aa7.81□□□□□ -1.16
Rfx1-201ENSMUST00000005600 Wfdc6bF6ULY1 148 aa7.81□□□□□ -1.16
Rfx1-201ENSMUST00000005600 Igkv3-12A0A140T8P0 119 aa7.78□□□□□ -1.16
Retrieved 100 of 22,080 RNA–protein pairs in 63 ms