RNA–Protein interactions for RNA: ENSMUST00000002412.8

Ncan-201, Transcript of Neurocan core protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ncan, Length 7,195 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ncan-201ENSMUST00000002412 Krtap11-1E9Q2E9 183 aa8.36□□□□□ -1.07
Ncan-201ENSMUST00000002412 Abca2P41234 2434 aa8.35□□□□□ -1.07
Ncan-201ENSMUST00000002412 Gm16181B0V2H2 73 aa8.33□□□□□ -1.08
Ncan-201ENSMUST00000002412 1810062G17RikG3X8Y2 129 aa8.33□□□□□ -1.08
Ncan-201ENSMUST00000002412 Gm3250E9Q1M3 230 aa8.32□□□□□ -1.08
Ncan-201ENSMUST00000002412 2310034C09RikQ9D746 214 aa8.32□□□□□ -1.08
Ncan-201ENSMUST00000002412 Hivep2Q3UHF7 2430 aa8.31□□□□□ -1.08
Ncan-201ENSMUST00000002412 Cypt15B1AXS0 87 aa8.3□□□□□ -1.08
Ncan-201ENSMUST00000002412 Gm9573F7C950 1606 aa8.29□□□□□ -1.08
Ncan-201ENSMUST00000002412 Gm10772F7AIG4 85 aa8.28□□□□□ -1.08
Ncan-201ENSMUST00000002412 Gm9955Q8CEJ8 102 aa8.25□□□□□ -1.09
Ncan-201ENSMUST00000002412 Defb11Q8R2I7 77 aa8.25□□□□□ -1.09
Ncan-201ENSMUST00000002412 Dmbt1Q60997 2085 aa8.24□□□□□ -1.09
Ncan-201ENSMUST00000002412 CnbpP53996 178 aaKnown RBP8.23□□□□□ -1.09
Ncan-201ENSMUST00000002412 Defb9Q8R2I6 67 aa8.22□□□□□ -1.09
Ncan-201ENSMUST00000002412 Col27a1Q5QNQ9 1845 aa8.22□□□□□ -1.09
Ncan-201ENSMUST00000002412 6030445D17RikE9Q8F9 148 aa8.18□□□□□ -1.1
Ncan-201ENSMUST00000002412 Notch2O35516 2470 aa8.18□□□□□ -1.1
Ncan-201ENSMUST00000002412 Krtap26-1Q9D7N2 215 aa8.18□□□□□ -1.1
Ncan-201ENSMUST00000002412 AY074887Q8R5F9 132 aa8.17□□□□□ -1.1
Ncan-201ENSMUST00000002412 Col5a1O88207 1838 aa8.17□□□□□ -1.1
Ncan-201ENSMUST00000002412 Sprr4Q8CGN8 76 aa8.16□□□□□ -1.1
Ncan-201ENSMUST00000002412 Camk2n1Q6QWF9 78 aa8.15□□□□□ -1.1
Ncan-201ENSMUST00000002412 Gm9821Q8K076 103 aa8.15□□□□□ -1.1
Ncan-201ENSMUST00000002412 Lypd5Q9D7Z7 256 aa8.14□□□□□ -1.11
Ncan-201ENSMUST00000002412 C530025M09RikF6RGA8 229 aa8.14□□□□□ -1.11
Ncan-201ENSMUST00000002412 Krtap24-1G3X9A2 248 aa8.12□□□□□ -1.11
Ncan-201ENSMUST00000002412 Gm26620Q9CY65 116 aa8.12□□□□□ -1.11
Ncan-201ENSMUST00000002412 Col4a4Q9QZR9 1682 aa8.12□□□□□ -1.11
Ncan-201ENSMUST00000002412 Plac8Q9JI48 112 aa8.12□□□□□ -1.11
Ncan-201ENSMUST00000002412 Ankhd1E9PUR0 2548 aaKnown RBP8.12□□□□□ -1.11
Ncan-201ENSMUST00000002412 Gm4491E0CX42 125 aa8.11□□□□□ -1.11
Ncan-201ENSMUST00000002412 UtrnE9Q6R7 3430 aa8.11□□□□□ -1.11
Ncan-201ENSMUST00000002412 Piezo2Q8CD54 2822 aa8.1□□□□□ -1.11
Ncan-201ENSMUST00000002412 Sprr1bQ62267 153 aa8.1□□□□□ -1.11
Ncan-201ENSMUST00000002412 PolqQ8CGS6 2544 aa8.1□□□□□ -1.11
Ncan-201ENSMUST00000002412 Golgb1E9PVZ8 3238 aa8.08□□□□□ -1.12
Ncan-201ENSMUST00000002412 AW011738F6S7Q2 159 aa8.04□□□□□ -1.12
Ncan-201ENSMUST00000002412 Zfyve26Q5DU37 2529 aa8.04□□□□□ -1.12
Ncan-201ENSMUST00000002412 Gm3646F6S692 53 aa8.04□□□□□ -1.12
Ncan-201ENSMUST00000002412 Smim29Q8R043 75 aa8.03□□□□□ -1.12
Ncan-201ENSMUST00000002412 Psors1c2Q80ZC9 134 aa8.02□□□□□ -1.13
Ncan-201ENSMUST00000002412 Gm3285A0A1W2P7U0 201 aa8.01□□□□□ -1.13
Ncan-201ENSMUST00000002412 Zcchc13Q9D548 170 aa7.99□□□□□ -1.13
Ncan-201ENSMUST00000002412 Ttc28Q80XJ3 2450 aa7.98□□□□□ -1.13
Ncan-201ENSMUST00000002412 Lrrk2Q5S006 2527 aa7.97□□□□□ -1.13
Ncan-201ENSMUST00000002412 Krtap15-1Q9QZU5 150 aa7.95□□□□□ -1.14
Ncan-201ENSMUST00000002412 Tln1P26039 2541 aaKnown RBP7.95□□□□□ -1.14
Ncan-201ENSMUST00000002412 Gm42715A0A087WP63 3095 aaKnown RBP7.94□□□□□ -1.14
Ncan-201ENSMUST00000002412 Romo1P60603 79 aa7.93□□□□□ -1.14
Ncan-201ENSMUST00000002412 Col4a2P08122 1707 aa7.91□□□□□ -1.14
Ncan-201ENSMUST00000002412 Ep400Q8CHI8 3072 aaKnown RBP7.9□□□□□ -1.14
Ncan-201ENSMUST00000002412 Gm3233E9Q2H5 230 aa7.9□□□□□ -1.15
Ncan-201ENSMUST00000002412 Fam104aA2A6P4 185 aa7.89□□□□□ -1.15
Ncan-201ENSMUST00000002412 Cystm1Q8K353 104 aa7.88□□□□□ -1.15
Ncan-201ENSMUST00000002412 Cep192E9Q4Y4 2514 aaKnown RBP7.87□□□□□ -1.15
Ncan-201ENSMUST00000002412 Jbts17Q8CE72 3214 aa7.86□□□□□ -1.15
Ncan-201ENSMUST00000002412 Odf3bQ5M8M2 238 aa7.86□□□□□ -1.15
Ncan-201ENSMUST00000002412 Gm9508A0A1W2P7W0 230 aa7.85□□□□□ -1.15
Ncan-201ENSMUST00000002412 Gm10382Q3V0T5 144 aa7.84□□□□□ -1.15
Ncan-201ENSMUST00000002412 Cypt14J3QPF7 87 aa7.83□□□□□ -1.16
Ncan-201ENSMUST00000002412 Zfp462B1AWL2 2495 aaKnown RBP7.83□□□□□ -1.16
Ncan-201ENSMUST00000002412 Lama3Q61789 3330 aa7.82□□□□□ -1.16
Ncan-201ENSMUST00000002412 Fam229aB2KGE5 128 aa7.81□□□□□ -1.16
Ncan-201ENSMUST00000002412 Rpl37Q9D823 97 aa7.8□□□□□ -1.16
Ncan-201ENSMUST00000002412 Gm37013Q8K491 104 aa7.79□□□□□ -1.16
Ncan-201ENSMUST00000002412 Gm10320E9PW43 113 aa7.79□□□□□ -1.16
Ncan-201ENSMUST00000002412 Ndufaf8A2AMZ4 74 aa7.78□□□□□ -1.16
Ncan-201ENSMUST00000002412 Gm7138L7N2C3 230 aa7.77□□□□□ -1.16
Ncan-201ENSMUST00000002412 Gm3238W4VSP7 230 aa7.77□□□□□ -1.16
Ncan-201ENSMUST00000002412 Epg5Q80TA9 2572 aa7.77□□□□□ -1.17
Ncan-201ENSMUST00000002412 Setd2E9Q5F9 2537 aa7.77□□□□□ -1.17
Ncan-201ENSMUST00000002412 Sptbn4E9PX29 2561 aa7.76□□□□□ -1.17
Ncan-201ENSMUST00000002412 Usp9xP70398 2559 aaKnown RBP7.75□□□□□ -1.17
Ncan-201ENSMUST00000002412 1700042G07RikB1AUF7 90 aa7.75□□□□□ -1.17
Ncan-201ENSMUST00000002412 Ptpn13Q64512 2453 aa7.71□□□□□ -1.18
Ncan-201ENSMUST00000002412 NbdyA0A0N4SUI7 68 aa7.7□□□□□ -1.18
Ncan-201ENSMUST00000002412 Gm7137J3QMW1 236 aa7.7□□□□□ -1.18
Ncan-201ENSMUST00000002412 Piezo1E2JF22 2547 aa7.7□□□□□ -1.18
Ncan-201ENSMUST00000002412 Gm19426M0QWC7 77 aa7.67□□□□□ -1.18
Ncan-201ENSMUST00000002412 OxtP35454 125 aa7.66□□□□□ -1.18
Ncan-201ENSMUST00000002412 Nbeal1E9PYP2 2688 aa7.65□□□□□ -1.19
Ncan-201ENSMUST00000002412 Dnah12Q3V0Q1 3086 aa7.63□□□□□ -1.19
Ncan-201ENSMUST00000002412 4933415A04RikQ9D443 101 aa7.62□□□□□ -1.19
Ncan-201ENSMUST00000002412 Gm9112A2AI92 75 aa7.61□□□□□ -1.19
Ncan-201ENSMUST00000002412 TrioQ0KL02 3102 aa7.61□□□□□ -1.19
Ncan-201ENSMUST00000002412 HrnrQ8VHD8 2496 aa7.6□□□□□ -1.19
Ncan-201ENSMUST00000002412 2310050C09RikG5E8Z3 280 aa7.58□□□□□ -1.2
Ncan-201ENSMUST00000002412 Usp34Q6ZQ93 3582 aa7.57□□□□□ -1.2
Ncan-201ENSMUST00000002412 Cep350E9Q309 3095 aa7.55□□□□□ -1.2
Ncan-201ENSMUST00000002412 Gm10065F6TJM2 114 aa7.54□□□□□ -1.2
Ncan-201ENSMUST00000002412 Gm10139O88245 57 aa7.54□□□□□ -1.2
Ncan-201ENSMUST00000002412 BC029722A0A0N4SW31 51 aa7.53□□□□□ -1.2
Ncan-201ENSMUST00000002412 A730071L15RikQ8C4X0 137 aa7.53□□□□□ -1.2
Ncan-201ENSMUST00000002412 MtorQ9JLN9 2549 aa7.52□□□□□ -1.21
Ncan-201ENSMUST00000002412 Chd8Q09XV5 2582 aaKnown RBP7.51□□□□□ -1.21
Ncan-201ENSMUST00000002412 Gm17349F7BGH6 99 aa7.5□□□□□ -1.21
Ncan-201ENSMUST00000002412 SmcpP15265 143 aa7.49□□□□□ -1.21
Ncan-201ENSMUST00000002412 SetxA2AKX3 2646 aa7.48□□□□□ -1.21
Ncan-201ENSMUST00000002412 Prune2Q52KR3 3084 aa7.45□□□□□ -1.22
Retrieved 100 of 22,080 RNA–protein pairs in 11.4 ms