RNA–Protein interactions for RNA: ENSMUST00000213114.1

Ldlr-202, Transcript of Low-density lipoprotein receptor, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ldlr, Length 4,318 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldlr-202ENSMUST00000213114 Igkv8-18A0A0B4J1J3 123 aa6.72□□□□□ -1.33
Ldlr-202ENSMUST00000213114 9230102O04RikA2ASX7 82 aa6.72□□□□□ -1.33
Ldlr-202ENSMUST00000213114 Trbv13-2A0A140T8N6 113 aa6.72□□□□□ -1.33
Ldlr-202ENSMUST00000213114 A830031A19RikQ8BNT5 113 aa6.72□□□□□ -1.33
Ldlr-202ENSMUST00000213114 CdsnQ7TPC1 561 aa6.72□□□□□ -1.33
Ldlr-202ENSMUST00000213114 Defb10Q8R2I8 73 aa6.72□□□□□ -1.33
Ldlr-202ENSMUST00000213114 Ube2d4D3YUH6 135 aa6.71□□□□□ -1.33
Ldlr-202ENSMUST00000213114 PscaP57096 123 aa6.71□□□□□ -1.33
Ldlr-202ENSMUST00000213114 P06329 120 aa6.71□□□□□ -1.34
Ldlr-202ENSMUST00000213114 Rnf152Q8BG47 203 aa6.7□□□□□ -1.34
Ldlr-202ENSMUST00000213114 Chd6A3KFM7 2711 aa6.7□□□□□ -1.34
Ldlr-202ENSMUST00000213114 B9d2Q3UK10 175 aa6.7□□□□□ -1.34
Ldlr-202ENSMUST00000213114 Plac8l1Q08EJ0 177 aa6.7□□□□□ -1.34
Ldlr-202ENSMUST00000213114 Smr3aQ61900 147 aa6.7□□□□□ -1.34
Ldlr-202ENSMUST00000213114 Prr15lQ8JZM2 100 aa6.7□□□□□ -1.34
Ldlr-202ENSMUST00000213114 Klk9Q32M27 251 aa6.69□□□□□ -1.34
Ldlr-202ENSMUST00000213114 Fam19a5Q91WE9 132 aa6.69□□□□□ -1.34
Ldlr-202ENSMUST00000213114 Nsd1O88491 2588 aaKnown RBP6.69□□□□□ -1.34
Ldlr-202ENSMUST00000213114 Sox16Q62247 57 aa6.69□□□□□ -1.34
Ldlr-202ENSMUST00000213114 NpwA0A1L1STR8 176 aa6.68□□□□□ -1.34
Ldlr-202ENSMUST00000213114 Gm9805F6YK59 57 aa6.68□□□□□ -1.34
Ldlr-202ENSMUST00000213114 NbeaQ9EPN1 2936 aa6.68□□□□□ -1.34
Ldlr-202ENSMUST00000213114 Defb45Q3V490 66 aa6.68□□□□□ -1.34
Ldlr-202ENSMUST00000213114 Lelp1Q9DAE3 120 aa6.68□□□□□ -1.34
Ldlr-202ENSMUST00000213114 Trav14-1A0A0G2JF94 121 aa6.68□□□□□ -1.34
Ldlr-202ENSMUST00000213114 Krtap26-1Q9D7N2 215 aa6.68□□□□□ -1.34
Ldlr-202ENSMUST00000213114 Gm4707V9GXN5 68 aa6.68□□□□□ -1.34
Ldlr-202ENSMUST00000213114 9430015G10RikA2ASP7 199 aa6.67□□□□□ -1.34
Ldlr-202ENSMUST00000213114 Tfpi2O35536 230 aa6.67□□□□□ -1.34
Ldlr-202ENSMUST00000213114 Fgf23Q9EPC2 251 aa6.67□□□□□ -1.34
Ldlr-202ENSMUST00000213114 Gpha2Q925Q5 128 aa6.67□□□□□ -1.34
Ldlr-202ENSMUST00000213114 Myo15aQ9QZZ4 3511 aa6.66□□□□□ -1.34
Ldlr-202ENSMUST00000213114 Tcl1b3P56842 122 aa6.66□□□□□ -1.34
Ldlr-202ENSMUST00000213114 Fam19a1Q7TPG8 133 aa6.66□□□□□ -1.34
Ldlr-202ENSMUST00000213114 Itpr3P70227 2670 aa6.66□□□□□ -1.34
Ldlr-202ENSMUST00000213114 Apoc4Q61268 124 aa6.66□□□□□ -1.34
Ldlr-202ENSMUST00000213114 Ube2aQ9Z255 152 aa6.66□□□□□ -1.34
Ldlr-202ENSMUST00000213114 Gm37389A0A0A6YW05 95 aa6.65□□□□□ -1.34
Ldlr-202ENSMUST00000213114 Igkv3-10A0A0G2JGN0 119 aa6.65□□□□□ -1.34
Ldlr-202ENSMUST00000213114 Csdc2Q91YQ3 154 aa6.65□□□□□ -1.35
Ldlr-202ENSMUST00000213114 4930524J08RikQ9CUJ5 163 aa6.65□□□□□ -1.35
Ldlr-202ENSMUST00000213114 Vpreb3D3Z6J4 130 aa6.64□□□□□ -1.35
Ldlr-202ENSMUST00000213114 ScxQ64124 207 aa6.64□□□□□ -1.35
Ldlr-202ENSMUST00000213114 TeppQ6IMH0 216 aa6.64□□□□□ -1.35
Ldlr-202ENSMUST00000213114 SptssbQ925E8 76 aa6.64□□□□□ -1.35
Ldlr-202ENSMUST00000213114 P06320 134 aa6.64□□□□□ -1.35
Ldlr-202ENSMUST00000213114 Krtap24-1G3X9A2 248 aa6.64□□□□□ -1.35
Ldlr-202ENSMUST00000213114 Gm884A2A9H6 3643 aa6.64□□□□□ -1.35
Ldlr-202ENSMUST00000213114 Rpl28P41105 137 aaKnown RBP6.64□□□□□ -1.35
Ldlr-202ENSMUST00000213114 Serp1Q9Z1W5 66 aa6.63□□□□□ -1.35
Ldlr-202ENSMUST00000213114 Gm5142Q8C5X9 133 aa6.63□□□□□ -1.35
Ldlr-202ENSMUST00000213114 Zfand2aQ9JII7 171 aa6.63□□□□□ -1.35
Ldlr-202ENSMUST00000213114 Ighv2-9-1A0A075B697 116 aa6.63□□□□□ -1.35
Ldlr-202ENSMUST00000213114 Ighv10-1A0A0B4J1J6 119 aa6.62□□□□□ -1.35
Ldlr-202ENSMUST00000213114 Gm9887F6RFI0 207 aa6.62□□□□□ -1.35
Ldlr-202ENSMUST00000213114 Igkv3-5A0A140T8M6 119 aa6.62□□□□□ -1.35
Ldlr-202ENSMUST00000213114 DspE9Q557 2883 aaKnown RBP6.62□□□□□ -1.35
Ldlr-202ENSMUST00000213114 CrygaP04345 174 aa6.62□□□□□ -1.35
Ldlr-202ENSMUST00000213114 Odf3l2Q3TZ65 277 aa6.62□□□□□ -1.35
Ldlr-202ENSMUST00000213114 Nupr2Q497P3 102 aa6.62□□□□□ -1.35
Ldlr-202ENSMUST00000213114 SnurfQ9WU12 71 aa6.62□□□□□ -1.35
Ldlr-202ENSMUST00000213114 Gm12353A2AGJ4 60 aa6.61□□□□□ -1.35
Ldlr-202ENSMUST00000213114 Col6a5A6H584 2640 aa6.61□□□□□ -1.35
Ldlr-202ENSMUST00000213114 Igkv4-92A0A0B4J1I2 117 aa6.61□□□□□ -1.35
Ldlr-202ENSMUST00000213114 Gm10549Q3URY4 149 aa6.61□□□□□ -1.35
Ldlr-202ENSMUST00000213114 RelnQ60841 3461 aa6.61□□□□□ -1.35
Ldlr-202ENSMUST00000213114 Ndufs5Q99LY9 106 aa6.61□□□□□ -1.35
Ldlr-202ENSMUST00000213114 Prr13Q9CQJ5 137 aa6.61□□□□□ -1.35
Ldlr-202ENSMUST00000213114 Igkv1-117A0A140T8M0 119 aa6.6□□□□□ -1.35
Ldlr-202ENSMUST00000213114 Gm10401E9Q3K6 71 aa6.6□□□□□ -1.35
Ldlr-202ENSMUST00000213114 Gm17521F6QAC8 156 aa6.6□□□□□ -1.35
Ldlr-202ENSMUST00000213114 Sostdc1Q9CQN4 206 aa6.6□□□□□ -1.35
Ldlr-202ENSMUST00000213114 Obox2E9PXV9 151 aa6.59□□□□□ -1.35
Ldlr-202ENSMUST00000213114 9530003J23RikQ8BM26 151 aa6.59□□□□□ -1.35
Ldlr-202ENSMUST00000213114 Gm10845Q3UNY9 185 aa6.59□□□□□ -1.35
Ldlr-202ENSMUST00000213114 Atox1O08997 68 aaKnown RBP6.59□□□□□ -1.35
Ldlr-202ENSMUST00000213114 4930556J24RikQ9D4U7 146 aa6.59□□□□□ -1.35
Ldlr-202ENSMUST00000213114 Dmbt1Q60997 2085 aa6.59□□□□□ -1.35
Ldlr-202ENSMUST00000213114 Igsf10Q3V1M1 2594 aa6.59□□□□□ -1.36
Ldlr-202ENSMUST00000213114 MobpQ9D2P8 170 aa6.58□□□□□ -1.36
Ldlr-202ENSMUST00000213114 H2al1bA0A087WP11 105 aa6.57□□□□□ -1.36
Ldlr-202ENSMUST00000213114 Gm3233E9Q2H5 230 aa6.57□□□□□ -1.36
Ldlr-202ENSMUST00000213114 SycnQ8VCK7 134 aa6.57□□□□□ -1.36
Ldlr-202ENSMUST00000213114 SpenQ62504 3644 aaKnown RBP6.57□□□□□ -1.36
Ldlr-202ENSMUST00000213114 Gm11011D3Z3L9 86 aa6.57□□□□□ -1.36
Ldlr-202ENSMUST00000213114 Cox7bP56393 80 aa6.57□□□□□ -1.36
Ldlr-202ENSMUST00000213114 4930518I15RikQ3V2W7 57 aa6.56□□□□□ -1.36
Ldlr-202ENSMUST00000213114 Nbeal2Q6ZQA0 2742 aa6.56□□□□□ -1.36
Ldlr-202ENSMUST00000213114 AI854703Q8BIN3 203 aa6.56□□□□□ -1.36
Ldlr-202ENSMUST00000213114 A830005F24RikQ8BRT5 167 aa6.56□□□□□ -1.36
Ldlr-202ENSMUST00000213114 Zzef1Q5SSH7 2924 aa6.55□□□□□ -1.36
Ldlr-202ENSMUST00000213114 FlncQ8VHX6 2726 aaKnown RBP6.55□□□□□ -1.36
Ldlr-202ENSMUST00000213114 Ighv8-13A0A075B5Y0 101 aa6.55□□□□□ -1.36
Ldlr-202ENSMUST00000213114 Zfhx3Q61329 3726 aa6.55□□□□□ -1.36
Ldlr-202ENSMUST00000213114 UqcrqQ9CQ69 82 aa6.54□□□□□ -1.36
Ldlr-202ENSMUST00000213114 Ly6g6cQ9Z1Q4 126 aa6.54□□□□□ -1.36
Ldlr-202ENSMUST00000213114 Hivep1Q03172 2688 aa6.54□□□□□ -1.36
Ldlr-202ENSMUST00000213114 Tcl1b5P56845 121 aa6.54□□□□□ -1.36
Ldlr-202ENSMUST00000213114 Gm16485Q8C4B7 115 aa6.54□□□□□ -1.36
Ldlr-202ENSMUST00000213114 BaalcQ8VHV1 145 aa6.54□□□□□ -1.36
Retrieved 100 of 22,080 RNA–protein pairs in 37.1 ms