RNA–Protein interactions for RNA: ENSMUST00000201549.3

Scn8a-213, Transcript of Sodium channel protein type 8 subunit alpha, mousemouse

APPRIS P5 TSL 5 BASIC

Gene Scn8a, Length 7,120 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8a-213ENSMUST00000201549 Rpl28P41105 137 aaKnown RBP6.72□□□□□ -1.33
Scn8a-213ENSMUST00000201549 AplnQ9R0R4 77 aa6.71□□□□□ -1.34
Scn8a-213ENSMUST00000201549 BC067074F6RXI4 2391 aa6.71□□□□□ -1.34
Scn8a-213ENSMUST00000201549 Fgf23Q9EPC2 251 aa6.71□□□□□ -1.34
Scn8a-213ENSMUST00000201549 Eif4ebp1Q60876 117 aa6.7□□□□□ -1.34
Scn8a-213ENSMUST00000201549 A730009L09RikA0A1B0GS82 72 aa6.7□□□□□ -1.34
Scn8a-213ENSMUST00000201549 P06329 120 aa6.7□□□□□ -1.34
Scn8a-213ENSMUST00000201549 4930432M17RikQ3V0W9 174 aa6.69□□□□□ -1.34
Scn8a-213ENSMUST00000201549 Pla2g2cP48076 150 aa6.69□□□□□ -1.34
Scn8a-213ENSMUST00000201549 Defb2P82020 71 aa6.68□□□□□ -1.34
Scn8a-213ENSMUST00000201549 Fgfbp3Q1HCM0 245 aa6.68□□□□□ -1.34
Scn8a-213ENSMUST00000201549 Celsr3Q91ZI0 3301 aa6.68□□□□□ -1.34
Scn8a-213ENSMUST00000201549 Gm10197F6QEY5 67 aa6.68□□□□□ -1.34
Scn8a-213ENSMUST00000201549 Pla2g10Q9QXX3 151 aa6.67□□□□□ -1.34
Scn8a-213ENSMUST00000201549 4930556J24RikQ9D4U7 146 aa6.67□□□□□ -1.34
Scn8a-213ENSMUST00000201549 Cox8cA6H666 72 aa6.67□□□□□ -1.34
Scn8a-213ENSMUST00000201549 Gm10135F6TEE5 83 aa6.67□□□□□ -1.34
Scn8a-213ENSMUST00000201549 A530084C06RikQ3UTW2 186 aa6.67□□□□□ -1.34
Scn8a-213ENSMUST00000201549 Ankhd1E9PUR0 2548 aaKnown RBP6.66□□□□□ -1.34
Scn8a-213ENSMUST00000201549 Ighv2-5A0A0A6YY69 116 aa6.66□□□□□ -1.34
Scn8a-213ENSMUST00000201549 Rev3lQ61493 3122 aa6.66□□□□□ -1.34
Scn8a-213ENSMUST00000201549 Nav3Q80TN7 2359 aa6.66□□□□□ -1.34
Scn8a-213ENSMUST00000201549 1700011M02RikB1AX35 88 aa6.66□□□□□ -1.34
Scn8a-213ENSMUST00000201549 Gm10570F6VB42 170 aa6.66□□□□□ -1.34
Scn8a-213ENSMUST00000201549 B230217C12RikE9Q3Z1 139 aa6.66□□□□□ -1.34
Scn8a-213ENSMUST00000201549 Phxr5P08399 672 aa6.66□□□□□ -1.34
Scn8a-213ENSMUST00000201549 Bri3P28662 125 aa6.66□□□□□ -1.34
Scn8a-213ENSMUST00000201549 Gm10509O88255 85 aa6.66□□□□□ -1.34
Scn8a-213ENSMUST00000201549 Rnase13Q5GAM7 153 aa6.65□□□□□ -1.35
Scn8a-213ENSMUST00000201549 Abca2P41234 2434 aa6.65□□□□□ -1.35
Scn8a-213ENSMUST00000201549 Piezo1E2JF22 2547 aa6.65□□□□□ -1.35
Scn8a-213ENSMUST00000201549 Prr9Q8BV84 116 aa6.64□□□□□ -1.35
Scn8a-213ENSMUST00000201549 Rif1Q6PR54 2419 aaKnown RBP6.64□□□□□ -1.35
Scn8a-213ENSMUST00000201549 A930009A15RikG3UYI6 118 aa6.64□□□□□ -1.35
Scn8a-213ENSMUST00000201549 Frem2Q6NVD0 3160 aa6.63□□□□□ -1.35
Scn8a-213ENSMUST00000201549 Defb42Q8BVB5 75 aa6.62□□□□□ -1.35
Scn8a-213ENSMUST00000201549 SetxA2AKX3 2646 aa6.62□□□□□ -1.35
Scn8a-213ENSMUST00000201549 Cdc42se2Q8BGH7 84 aa6.62□□□□□ -1.35
Scn8a-213ENSMUST00000201549 Chd7A2AJK6 2986 aaKnown RBP6.62□□□□□ -1.35
Scn8a-213ENSMUST00000201549 Gm10322F7D7I4 111 aa6.62□□□□□ -1.35
Scn8a-213ENSMUST00000201549 Q9DAB9 146 aa6.62□□□□□ -1.35
Scn8a-213ENSMUST00000201549 1810062G17RikG3X8Y2 129 aa6.61□□□□□ -1.35
Scn8a-213ENSMUST00000201549 Tnrc18Q80WC3 2878 aa6.61□□□□□ -1.35
Scn8a-213ENSMUST00000201549 Pde6gP09174 87 aa6.61□□□□□ -1.35
Scn8a-213ENSMUST00000201549 Crip3Q6Q6R3 243 aa6.61□□□□□ -1.35
Scn8a-213ENSMUST00000201549 Gm10999F6Q4M4 69 aa6.6□□□□□ -1.35
Scn8a-213ENSMUST00000201549 Ighv1-59A0A0A6YXE0 117 aa6.6□□□□□ -1.35
Scn8a-213ENSMUST00000201549 Hivep3A2A884 2348 aa6.6□□□□□ -1.35
Scn8a-213ENSMUST00000201549 Gm20538F6Z9R1 75 aa6.6□□□□□ -1.35
Scn8a-213ENSMUST00000201549 Defb50Q6TU36 73 aa6.6□□□□□ -1.35
Scn8a-213ENSMUST00000201549 Cdip1Q9DB75 208 aa6.6□□□□□ -1.35
Scn8a-213ENSMUST00000201549 Gm10577Q3UDV9 132 aa6.59□□□□□ -1.35
Scn8a-213ENSMUST00000201549 Igkv8-27A0A0G2JF28 120 aa6.59□□□□□ -1.35
Scn8a-213ENSMUST00000201549 Gm9767G3X930 207 aa6.59□□□□□ -1.35
Scn8a-213ENSMUST00000201549 AtmQ62388 3066 aa6.59□□□□□ -1.36
Scn8a-213ENSMUST00000201549 Krtap27-1E9PX37 202 aa6.58□□□□□ -1.36
Scn8a-213ENSMUST00000201549 Gm20661K7N787 53 aa6.58□□□□□ -1.36
Scn8a-213ENSMUST00000201549 BC025920Q3US60 128 aa6.57□□□□□ -1.36
Scn8a-213ENSMUST00000201549 Gm3443F7CCV5 94 aa6.57□□□□□ -1.36
Scn8a-213ENSMUST00000201549 Chchd10Q7TNL9 138 aa6.57□□□□□ -1.36
Scn8a-213ENSMUST00000201549 Gm10642Q3TWM1 71 aa6.57□□□□□ -1.36
Scn8a-213ENSMUST00000201549 Gm9922Q8C3P1 144 aa6.56□□□□□ -1.36
Scn8a-213ENSMUST00000201549 Prr13Q9CQJ5 137 aa6.56□□□□□ -1.36
Scn8a-213ENSMUST00000201549 4930524J08RikQ9CUJ5 163 aa6.56□□□□□ -1.36
Scn8a-213ENSMUST00000201549 Ttc28Q80XJ3 2450 aa6.56□□□□□ -1.36
Scn8a-213ENSMUST00000201549 Chchd7Q8K2Q5 85 aa6.55□□□□□ -1.36
Scn8a-213ENSMUST00000201549 Srsf12Q8C8K3 266 aa6.55□□□□□ -1.36
Scn8a-213ENSMUST00000201549 4930518I15RikQ3V2W7 57 aa6.55□□□□□ -1.36
Scn8a-213ENSMUST00000201549 6430550D23RikE9Q1X6 194 aa6.54□□□□□ -1.36
Scn8a-213ENSMUST00000201549 Gm5142Q8C5X9 133 aa6.54□□□□□ -1.36
Scn8a-213ENSMUST00000201549 D730001G18RikA0A087WQU7 115 aa6.54□□□□□ -1.36
Scn8a-213ENSMUST00000201549 Gm10300Q8C8P7 189 aa6.54□□□□□ -1.36
Scn8a-213ENSMUST00000201549 Usp9xP70398 2559 aaKnown RBP6.54□□□□□ -1.36
Scn8a-213ENSMUST00000201549 Cd164l2Q9D6W7 172 aa6.54□□□□□ -1.36
Scn8a-213ENSMUST00000201549 Lrrk2Q5S006 2527 aa6.53□□□□□ -1.36
Scn8a-213ENSMUST00000201549 Prrc2cQ3TLH4 2846 aaKnown RBP6.53□□□□□ -1.36
Scn8a-213ENSMUST00000201549 CrygaP04345 174 aa6.53□□□□□ -1.36
Scn8a-213ENSMUST00000201549 Hivep2Q3UHF7 2430 aa6.52□□□□□ -1.37
Scn8a-213ENSMUST00000201549 FrylF8VQ05 3007 aa6.52□□□□□ -1.37
Scn8a-213ENSMUST00000201549 Znf580Q9DB38 172 aa6.51□□□□□ -1.37
Scn8a-213ENSMUST00000201549 7530416G11RikJ3QJX6 159 aa6.51□□□□□ -1.37
Scn8a-213ENSMUST00000201549 Gm16485Q8C4B7 115 aa6.51□□□□□ -1.37
Scn8a-213ENSMUST00000201549 UqcrqQ9CQ69 82 aa6.51□□□□□ -1.37
Scn8a-213ENSMUST00000201549 Smr3aQ61900 147 aa6.5□□□□□ -1.37
Scn8a-213ENSMUST00000201549 Zfp292Q9Z2U2 2698 aa6.49□□□□□ -1.37
Scn8a-213ENSMUST00000201549 3110070M22RikQ9DAQ7 118 aa6.49□□□□□ -1.37
Scn8a-213ENSMUST00000201549 Brca2P97929 3329 aa6.49□□□□□ -1.37
Scn8a-213ENSMUST00000201549 Spaca4Q80ZQ0 127 aa6.49□□□□□ -1.37
Scn8a-213ENSMUST00000201549 Gm5464Q3UY29 175 aa6.49□□□□□ -1.37
Scn8a-213ENSMUST00000201549 MgaA2AWL7 3003 aaKnown RBP6.48□□□□□ -1.37
Scn8a-213ENSMUST00000201549 Gm28230A0A0A0MQ91 144 aa6.47□□□□□ -1.37
Scn8a-213ENSMUST00000201549 A930002H24RikQ8C8Y3 163 aa6.47□□□□□ -1.37
Scn8a-213ENSMUST00000201549 Gm9903Q8C9Y8 129 aa6.47□□□□□ -1.37
Scn8a-213ENSMUST00000201549 AI606181Q8C7B9 129 aa6.47□□□□□ -1.37
Scn8a-213ENSMUST00000201549 Col6a3E9PWQ3 3284 aa6.46□□□□□ -1.38
Scn8a-213ENSMUST00000201549 Gm10845Q3UNY9 185 aa6.46□□□□□ -1.38
Scn8a-213ENSMUST00000201549 Ptpn13Q64512 2453 aa6.46□□□□□ -1.38
Scn8a-213ENSMUST00000201549 Gm10549Q3URY4 149 aa6.46□□□□□ -1.38
Scn8a-213ENSMUST00000201549 1700018G05RikA0A1B0GSI2 66 aa6.45□□□□□ -1.38
Scn8a-213ENSMUST00000201549 Gm3250E9Q1M3 230 aa6.45□□□□□ -1.38
Retrieved 100 of 22,080 RNA–protein pairs in 50.8 ms