RNA–Protein interactions for RNA: ENSMUST00000199896.1

Smarcc1-207, Transcript of SWI/SNF complex subunit SMARCC1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Smarcc1, Length 5,773 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc1-207ENSMUST00000199896 Defb39Q70KL3 74 aa12.67□□□□□ -0.38
Smarcc1-207ENSMUST00000199896 Col27a1Q5QNQ9 1845 aa12.66□□□□□ -0.38
Smarcc1-207ENSMUST00000199896 Znf580Q9DB38 172 aa12.65□□□□□ -0.38
Smarcc1-207ENSMUST00000199896 Serp1Q9Z1W5 66 aa12.65□□□□□ -0.38
Smarcc1-207ENSMUST00000199896 NpwA0A1L1STR8 176 aa12.64□□□□□ -0.39
Smarcc1-207ENSMUST00000199896 Gm3250E9Q1M3 230 aa12.64□□□□□ -0.39
Smarcc1-207ENSMUST00000199896 Ntn5Q3UQ22 452 aa12.64□□□□□ -0.39
Smarcc1-207ENSMUST00000199896 Sox16Q62247 57 aa12.64□□□□□ -0.39
Smarcc1-207ENSMUST00000199896 A830031A19RikQ8BNT5 113 aa12.63□□□□□ -0.39
Smarcc1-207ENSMUST00000199896 Epg5Q80TA9 2572 aa12.63□□□□□ -0.39
Smarcc1-207ENSMUST00000199896 Q9DAA7 145 aa12.62□□□□□ -0.39
Smarcc1-207ENSMUST00000199896 Zfand2aQ9JII7 171 aa12.62□□□□□ -0.39
Smarcc1-207ENSMUST00000199896 Pou2af1Q64693 256 aa12.61□□□□□ -0.39
Smarcc1-207ENSMUST00000199896 Defb11Q8R2I7 77 aa12.6□□□□□ -0.39
Smarcc1-207ENSMUST00000199896 CenpwQ3URR0 86 aa12.59□□□□□ -0.39
Smarcc1-207ENSMUST00000199896 Igkv8-19A0A0G2JFN8 121 aa12.57□□□□□ -0.4
Smarcc1-207ENSMUST00000199896 Gm10549Q3URY4 149 aa12.57□□□□□ -0.4
Smarcc1-207ENSMUST00000199896 BC025920Q3US60 128 aa12.57□□□□□ -0.4
Smarcc1-207ENSMUST00000199896 Cd164Q9R0L9 197 aa12.57□□□□□ -0.4
Smarcc1-207ENSMUST00000199896 Abca12E9Q876 2595 aa12.56□□□□□ -0.4
Smarcc1-207ENSMUST00000199896 9230102O04RikA2ASX7 82 aa12.56□□□□□ -0.4
Smarcc1-207ENSMUST00000199896 Gm10135F6TEE5 83 aa12.56□□□□□ -0.4
Smarcc1-207ENSMUST00000199896 Gm28230A0A0A0MQ91 144 aa12.55□□□□□ -0.4
Smarcc1-207ENSMUST00000199896 Unc79Q0KK59 2596 aa12.55□□□□□ -0.4
Smarcc1-207ENSMUST00000199896 A730009L09RikA0A1B0GS82 72 aa12.55□□□□□ -0.4
Smarcc1-207ENSMUST00000199896 Gm16181B0V2H2 73 aa12.54□□□□□ -0.4
Smarcc1-207ENSMUST00000199896 Crip3Q6Q6R3 243 aa12.54□□□□□ -0.4
Smarcc1-207ENSMUST00000199896 Krtap24-1G3X9A2 248 aa12.53□□□□□ -0.4
Smarcc1-207ENSMUST00000199896 Usp9yF8VPU6 2556 aa12.5□□□□□ -0.41
Smarcc1-207ENSMUST00000199896 Spink13Q3UTS8 97 aa12.49□□□□□ -0.41
Smarcc1-207ENSMUST00000199896 3110070M22RikQ9DAQ7 118 aa12.49□□□□□ -0.41
Smarcc1-207ENSMUST00000199896 Defb37Q7TMD2 62 aa12.49□□□□□ -0.41
Smarcc1-207ENSMUST00000199896 Myo18bE9PV66 2605 aa12.48□□□□□ -0.41
Smarcc1-207ENSMUST00000199896 UqcrqQ9CQ69 82 aa12.48□□□□□ -0.41
Smarcc1-207ENSMUST00000199896 Gm43218A0A0G2JGT0 114 aa12.48□□□□□ -0.41
Smarcc1-207ENSMUST00000199896 Gm10642Q3TWM1 71 aa12.48□□□□□ -0.41
Smarcc1-207ENSMUST00000199896 CicQ924A2 2510 aa12.46□□□□□ -0.42
Smarcc1-207ENSMUST00000199896 Reg3aO09037 175 aa12.46□□□□□ -0.42
Smarcc1-207ENSMUST00000199896 4930519P11RikQ9CUJ8 166 aa12.45□□□□□ -0.42
Smarcc1-207ENSMUST00000199896 Ighv1-56A0A0A6YXG2 117 aa12.43□□□□□ -0.42
Smarcc1-207ENSMUST00000199896 H2al1kJ3QP08 105 aa12.43□□□□□ -0.42
Smarcc1-207ENSMUST00000199896 Col5a1O88207 1838 aa12.42□□□□□ -0.42
Smarcc1-207ENSMUST00000199896 CrygaP04345 174 aa12.42□□□□□ -0.42
Smarcc1-207ENSMUST00000199896 E130208F15RikQ3UPV3 143 aa12.41□□□□□ -0.42
Smarcc1-207ENSMUST00000199896 Golgb1E9PVZ8 3238 aa12.4□□□□□ -0.42
Smarcc1-207ENSMUST00000199896 Spata3Q9D9T6 193 aa12.39□□□□□ -0.43
Smarcc1-207ENSMUST00000199896 MobpQ9D2P8 170 aa12.38□□□□□ -0.43
Smarcc1-207ENSMUST00000199896 1700018G05RikA0A1B0GSI2 66 aa12.38□□□□□ -0.43
Smarcc1-207ENSMUST00000199896 Gm10570F6VB42 170 aa12.38□□□□□ -0.43
Smarcc1-207ENSMUST00000199896 Gm19935A0A1B0GSF9 52 aa12.37□□□□□ -0.43
Smarcc1-207ENSMUST00000199896 Cox6a2P43023 97 aa12.37□□□□□ -0.43
Smarcc1-207ENSMUST00000199896 Gm11627A6PWP4 55 aa12.36□□□□□ -0.43
Smarcc1-207ENSMUST00000199896 Snhg11Q4G0K9 87 aa12.35□□□□□ -0.43
Smarcc1-207ENSMUST00000199896 Fam19a3Q7TPG6 132 aa12.35□□□□□ -0.43
Smarcc1-207ENSMUST00000199896 AI606181Q8C7B9 129 aa12.35□□□□□ -0.43
Smarcc1-207ENSMUST00000199896 Mrpl34Q99N91 92 aa12.34□□□□□ -0.43
Smarcc1-207ENSMUST00000199896 Msrb1Q9JLC3 116 aa12.33□□□□□ -0.44
Smarcc1-207ENSMUST00000199896 2310034G01RikA0A286YDL3 209 aa12.32□□□□□ -0.44
Smarcc1-207ENSMUST00000199896 Chchd10Q7TNL9 138 aa12.32□□□□□ -0.44
Smarcc1-207ENSMUST00000199896 Znf414Q9DCK4 299 aa12.32□□□□□ -0.44
Smarcc1-207ENSMUST00000199896 SnurfQ9WU12 71 aa12.31□□□□□ -0.44
Smarcc1-207ENSMUST00000199896 Phf5aP83870 110 aaKnown RBP12.3□□□□□ -0.44
Smarcc1-207ENSMUST00000199896 FlnbQ80X90 2602 aaKnown RBP12.3□□□□□ -0.44
Smarcc1-207ENSMUST00000199896 Dmac1Q9CQ00 111 aa12.29□□□□□ -0.44
Smarcc1-207ENSMUST00000199896 Ankrd11E9Q4F7 2643 aa12.29□□□□□ -0.44
Smarcc1-207ENSMUST00000199896 Gm9903Q8C9Y8 129 aa12.29□□□□□ -0.44
Smarcc1-207ENSMUST00000199896 Gm26661M0QWV4 156 aa12.28□□□□□ -0.44
Smarcc1-207ENSMUST00000199896 Sostdc1Q9CQN4 206 aa12.28□□□□□ -0.44
Smarcc1-207ENSMUST00000199896 Hcfc1Q61191 2045 aaKnown RBP12.28□□□□□ -0.44
Smarcc1-207ENSMUST00000199896 Gm21886J3QJU9 214 aa12.27□□□□□ -0.45
Smarcc1-207ENSMUST00000199896 Bean1Q9EQG5 255 aa12.27□□□□□ -0.45
Smarcc1-207ENSMUST00000199896 RetnlbQ99P86 105 aa12.26□□□□□ -0.45
Smarcc1-207ENSMUST00000199896 Gm17606F6ZL36 78 aa12.26□□□□□ -0.45
Smarcc1-207ENSMUST00000199896 1810062G17RikG3X8Y2 129 aa12.26□□□□□ -0.45
Smarcc1-207ENSMUST00000199896 Gm10837Q3UTT8 145 aa12.26□□□□□ -0.45
Smarcc1-207ENSMUST00000199896 Smr3aQ61900 147 aa12.25□□□□□ -0.45
Smarcc1-207ENSMUST00000199896 Gpr15lA0A0B4J1N3 78 aa12.25□□□□□ -0.45
Smarcc1-207ENSMUST00000199896 Zfp292Q9Z2U2 2698 aa12.24□□□□□ -0.45
Smarcc1-207ENSMUST00000199896 P01819 144 aa12.24□□□□□ -0.45
Smarcc1-207ENSMUST00000199896 Defb45Q3V490 66 aa12.23□□□□□ -0.45
Smarcc1-207ENSMUST00000199896 Coa6Q8BGD8 79 aa12.22□□□□□ -0.45
Smarcc1-207ENSMUST00000199896 Gm10337F7DEP7 55 aa12.22□□□□□ -0.45
Smarcc1-207ENSMUST00000199896 Defb50Q6TU36 73 aa12.22□□□□□ -0.45
Smarcc1-207ENSMUST00000199896 6430550D23RikE9Q1X6 194 aa12.22□□□□□ -0.45
Smarcc1-207ENSMUST00000199896 Elof1P60003 83 aa12.21□□□□□ -0.45
Smarcc1-207ENSMUST00000199896 Spaca4Q80ZQ0 127 aa12.21□□□□□ -0.46
Smarcc1-207ENSMUST00000199896 Gm44790A0A0N4SV91 103 aa12.2□□□□□ -0.46
Smarcc1-207ENSMUST00000199896 Csdc2Q91YQ3 154 aa12.2□□□□□ -0.46
Smarcc1-207ENSMUST00000199896 Krtap26-1Q9D7N2 215 aa12.18□□□□□ -0.46
Smarcc1-207ENSMUST00000199896 Cdip1Q9DB75 208 aa12.18□□□□□ -0.46
Smarcc1-207ENSMUST00000199896 Gm10772F7AIG4 85 aa12.18□□□□□ -0.46
Smarcc1-207ENSMUST00000199896 Cep192E9Q4Y4 2514 aaKnown RBP12.17□□□□□ -0.46
Smarcc1-207ENSMUST00000199896 Gm10160F6Y577 67 aa12.17□□□□□ -0.46
Smarcc1-207ENSMUST00000199896 Igkv8-27A0A0G2JF28 120 aa12.16□□□□□ -0.46
Smarcc1-207ENSMUST00000199896 Gm10999F6Q4M4 69 aa12.16□□□□□ -0.46
Smarcc1-207ENSMUST00000199896 FasnP19096 2504 aaKnown RBP12.16□□□□□ -0.46
Smarcc1-207ENSMUST00000199896 Ighv2-5A0A0A6YY69 116 aa12.16□□□□□ -0.46
Smarcc1-207ENSMUST00000199896 Gm5617Q91VN2 117 aa12.16□□□□□ -0.46
Smarcc1-207ENSMUST00000199896 Ankrd17Q99NH0 2603 aaKnown RBP12.14□□□□□ -0.47
Smarcc1-207ENSMUST00000199896 4930518I15RikQ3V2W7 57 aa12.12□□□□□ -0.47
Retrieved 100 of 22,080 RNA–protein pairs in 47.5 ms