RNA–Protein interactions for RNA: ENSMUST00000199896.1

Smarcc1-207, Transcript of SWI/SNF complex subunit SMARCC1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Smarcc1, Length 5,773 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc1-207ENSMUST00000199896 Defb39Q70KL3 74 aa12.67□□□□□ -0.38
Smarcc1-207ENSMUST00000199896 Col27a1Q5QNQ9 1845 aa12.66□□□□□ -0.38
Smarcc1-207ENSMUST00000199896 Znf580Q9DB38 172 aa12.65□□□□□ -0.38
Smarcc1-207ENSMUST00000199896 Serp1Q9Z1W5 66 aa12.65□□□□□ -0.38
Smarcc1-207ENSMUST00000199896 NpwA0A1L1STR8 176 aa12.64□□□□□ -0.39
Smarcc1-207ENSMUST00000199896 Gm3250E9Q1M3 230 aa12.64□□□□□ -0.39
Smarcc1-207ENSMUST00000199896 Ntn5Q3UQ22 452 aa12.64□□□□□ -0.39
Smarcc1-207ENSMUST00000199896 Sox16Q62247 57 aa12.64□□□□□ -0.39
Smarcc1-207ENSMUST00000199896 A830031A19RikQ8BNT5 113 aa12.63□□□□□ -0.39
Smarcc1-207ENSMUST00000199896 Epg5Q80TA9 2572 aa12.63□□□□□ -0.39
Smarcc1-207ENSMUST00000199896 Q9DAA7 145 aa12.62□□□□□ -0.39
Smarcc1-207ENSMUST00000199896 Zfand2aQ9JII7 171 aa12.62□□□□□ -0.39
Smarcc1-207ENSMUST00000199896 Pou2af1Q64693 256 aa12.61□□□□□ -0.39
Smarcc1-207ENSMUST00000199896 Defb11Q8R2I7 77 aa12.6□□□□□ -0.39
Smarcc1-207ENSMUST00000199896 CenpwQ3URR0 86 aa12.59□□□□□ -0.39
Smarcc1-207ENSMUST00000199896 Igkv8-19A0A0G2JFN8 121 aa12.57□□□□□ -0.4
Smarcc1-207ENSMUST00000199896 Gm10549Q3URY4 149 aa12.57□□□□□ -0.4
Smarcc1-207ENSMUST00000199896 BC025920Q3US60 128 aa12.57□□□□□ -0.4
Smarcc1-207ENSMUST00000199896 Cd164Q9R0L9 197 aa12.57□□□□□ -0.4
Smarcc1-207ENSMUST00000199896 Abca12E9Q876 2595 aa12.56□□□□□ -0.4
Smarcc1-207ENSMUST00000199896 9230102O04RikA2ASX7 82 aa12.56□□□□□ -0.4
Smarcc1-207ENSMUST00000199896 Gm10135F6TEE5 83 aa12.56□□□□□ -0.4
Smarcc1-207ENSMUST00000199896 Gm28230A0A0A0MQ91 144 aa12.55□□□□□ -0.4
Smarcc1-207ENSMUST00000199896 Unc79Q0KK59 2596 aa12.55□□□□□ -0.4
Smarcc1-207ENSMUST00000199896 A730009L09RikA0A1B0GS82 72 aa12.55□□□□□ -0.4
Smarcc1-207ENSMUST00000199896 Gm16181B0V2H2 73 aa12.54□□□□□ -0.4
Smarcc1-207ENSMUST00000199896 Crip3Q6Q6R3 243 aa12.54□□□□□ -0.4
Smarcc1-207ENSMUST00000199896 Krtap24-1G3X9A2 248 aa12.53□□□□□ -0.4
Smarcc1-207ENSMUST00000199896 Usp9yF8VPU6 2556 aa12.5□□□□□ -0.41
Smarcc1-207ENSMUST00000199896 Spink13Q3UTS8 97 aa12.49□□□□□ -0.41
Smarcc1-207ENSMUST00000199896 3110070M22RikQ9DAQ7 118 aa12.49□□□□□ -0.41
Smarcc1-207ENSMUST00000199896 Defb37Q7TMD2 62 aa12.49□□□□□ -0.41
Smarcc1-207ENSMUST00000199896 Myo18bE9PV66 2605 aa12.48□□□□□ -0.41
Smarcc1-207ENSMUST00000199896 UqcrqQ9CQ69 82 aa12.48□□□□□ -0.41
Smarcc1-207ENSMUST00000199896 Gm43218A0A0G2JGT0 114 aa12.48□□□□□ -0.41
Smarcc1-207ENSMUST00000199896 Gm10642Q3TWM1 71 aa12.48□□□□□ -0.41
Smarcc1-207ENSMUST00000199896 CicQ924A2 2510 aa12.46□□□□□ -0.42
Smarcc1-207ENSMUST00000199896 Reg3aO09037 175 aa12.46□□□□□ -0.42
Smarcc1-207ENSMUST00000199896 4930519P11RikQ9CUJ8 166 aa12.45□□□□□ -0.42
Smarcc1-207ENSMUST00000199896 Ighv1-56A0A0A6YXG2 117 aa12.43□□□□□ -0.42
Smarcc1-207ENSMUST00000199896 H2al1kJ3QP08 105 aa12.43□□□□□ -0.42
Smarcc1-207ENSMUST00000199896 Col5a1O88207 1838 aa12.42□□□□□ -0.42
Smarcc1-207ENSMUST00000199896 CrygaP04345 174 aa12.42□□□□□ -0.42
Smarcc1-207ENSMUST00000199896 E130208F15RikQ3UPV3 143 aa12.41□□□□□ -0.42
Smarcc1-207ENSMUST00000199896 Golgb1E9PVZ8 3238 aa12.4□□□□□ -0.42
Smarcc1-207ENSMUST00000199896 Spata3Q9D9T6 193 aa12.39□□□□□ -0.43
Smarcc1-207ENSMUST00000199896 MobpQ9D2P8 170 aa12.38□□□□□ -0.43
Smarcc1-207ENSMUST00000199896 1700018G05RikA0A1B0GSI2 66 aa12.38□□□□□ -0.43
Smarcc1-207ENSMUST00000199896 Gm10570F6VB42 170 aa12.38□□□□□ -0.43
Smarcc1-207ENSMUST00000199896 Gm19935A0A1B0GSF9 52 aa12.37□□□□□ -0.43
Smarcc1-207ENSMUST00000199896 Cox6a2P43023 97 aa12.37□□□□□ -0.43
Smarcc1-207ENSMUST00000199896 Gm11627A6PWP4 55 aa12.36□□□□□ -0.43
Smarcc1-207ENSMUST00000199896 Snhg11Q4G0K9 87 aa12.35□□□□□ -0.43
Smarcc1-207ENSMUST00000199896 Fam19a3Q7TPG6 132 aa12.35□□□□□ -0.43
Smarcc1-207ENSMUST00000199896 AI606181Q8C7B9 129 aa12.35□□□□□ -0.43
Smarcc1-207ENSMUST00000199896 Mrpl34Q99N91 92 aa12.34□□□□□ -0.43
Smarcc1-207ENSMUST00000199896 Msrb1Q9JLC3 116 aa12.33□□□□□ -0.44
Smarcc1-207ENSMUST00000199896 2310034G01RikA0A286YDL3 209 aa12.32□□□□□ -0.44
Smarcc1-207ENSMUST00000199896 Chchd10Q7TNL9 138 aa12.32□□□□□ -0.44
Smarcc1-207ENSMUST00000199896 Znf414Q9DCK4 299 aa12.32□□□□□ -0.44
Smarcc1-207ENSMUST00000199896 SnurfQ9WU12 71 aa12.31□□□□□ -0.44
Smarcc1-207ENSMUST00000199896 Phf5aP83870 110 aaKnown RBP12.3□□□□□ -0.44
Smarcc1-207ENSMUST00000199896 FlnbQ80X90 2602 aaKnown RBP12.3□□□□□ -0.44
Smarcc1-207ENSMUST00000199896 Dmac1Q9CQ00 111 aa12.29□□□□□ -0.44
Smarcc1-207ENSMUST00000199896 Ankrd11E9Q4F7 2643 aa12.29□□□□□ -0.44
Smarcc1-207ENSMUST00000199896 Gm9903Q8C9Y8 129 aa12.29□□□□□ -0.44
Smarcc1-207ENSMUST00000199896 Gm26661M0QWV4 156 aa12.28□□□□□ -0.44
Smarcc1-207ENSMUST00000199896 Sostdc1Q9CQN4 206 aa12.28□□□□□ -0.44
Smarcc1-207ENSMUST00000199896 Hcfc1Q61191 2045 aaKnown RBP12.28□□□□□ -0.44
Smarcc1-207ENSMUST00000199896 Gm21886J3QJU9 214 aa12.27□□□□□ -0.45
Smarcc1-207ENSMUST00000199896 Bean1Q9EQG5 255 aa12.27□□□□□ -0.45
Smarcc1-207ENSMUST00000199896 RetnlbQ99P86 105 aa12.26□□□□□ -0.45
Smarcc1-207ENSMUST00000199896 Gm17606F6ZL36 78 aa12.26□□□□□ -0.45
Smarcc1-207ENSMUST00000199896 1810062G17RikG3X8Y2 129 aa12.26□□□□□ -0.45
Smarcc1-207ENSMUST00000199896 Gm10837Q3UTT8 145 aa12.26□□□□□ -0.45
Smarcc1-207ENSMUST00000199896 Smr3aQ61900 147 aa12.25□□□□□ -0.45
Smarcc1-207ENSMUST00000199896 Gpr15lA0A0B4J1N3 78 aa12.25□□□□□ -0.45
Smarcc1-207ENSMUST00000199896 Zfp292Q9Z2U2 2698 aa12.24□□□□□ -0.45
Smarcc1-207ENSMUST00000199896 P01819 144 aa12.24□□□□□ -0.45
Smarcc1-207ENSMUST00000199896 Defb45Q3V490 66 aa12.23□□□□□ -0.45
Smarcc1-207ENSMUST00000199896 Coa6Q8BGD8 79 aa12.22□□□□□ -0.45
Smarcc1-207ENSMUST00000199896 Gm10337F7DEP7 55 aa12.22□□□□□ -0.45
Smarcc1-207ENSMUST00000199896 Defb50Q6TU36 73 aa12.22□□□□□ -0.45
Smarcc1-207ENSMUST00000199896 6430550D23RikE9Q1X6 194 aa12.22□□□□□ -0.45
Smarcc1-207ENSMUST00000199896 Elof1P60003 83 aa12.21□□□□□ -0.45
Smarcc1-207ENSMUST00000199896 Spaca4Q80ZQ0 127 aa12.21□□□□□ -0.46
Smarcc1-207ENSMUST00000199896 Gm44790A0A0N4SV91 103 aa12.2□□□□□ -0.46
Smarcc1-207ENSMUST00000199896 Csdc2Q91YQ3 154 aa12.2□□□□□ -0.46
Smarcc1-207ENSMUST00000199896 Krtap26-1Q9D7N2 215 aa12.18□□□□□ -0.46
Smarcc1-207ENSMUST00000199896 Cdip1Q9DB75 208 aa12.18□□□□□ -0.46
Smarcc1-207ENSMUST00000199896 Gm10772F7AIG4 85 aa12.18□□□□□ -0.46
Smarcc1-207ENSMUST00000199896 Cep192E9Q4Y4 2514 aaKnown RBP12.17□□□□□ -0.46
Smarcc1-207ENSMUST00000199896 Gm10160F6Y577 67 aa12.17□□□□□ -0.46
Smarcc1-207ENSMUST00000199896 Igkv8-27A0A0G2JF28 120 aa12.16□□□□□ -0.46
Smarcc1-207ENSMUST00000199896 Gm10999F6Q4M4 69 aa12.16□□□□□ -0.46
Smarcc1-207ENSMUST00000199896 FasnP19096 2504 aaKnown RBP12.16□□□□□ -0.46
Smarcc1-207ENSMUST00000199896 Ighv2-5A0A0A6YY69 116 aa12.16□□□□□ -0.46
Smarcc1-207ENSMUST00000199896 Gm5617Q91VN2 117 aa12.16□□□□□ -0.46
Smarcc1-207ENSMUST00000199896 Ankrd17Q99NH0 2603 aaKnown RBP12.14□□□□□ -0.47
Smarcc1-207ENSMUST00000199896 4930518I15RikQ3V2W7 57 aa12.12□□□□□ -0.47
Retrieved 100 of 22,080 RNA–protein pairs in 66.1 ms