RNA–Protein interactions for RNA: ENSMUST00000180353.1

Sox1-201, Transcript of Transcription factor SOX-1, mousemouse

APPRIS P1 BASIC

Gene Sox1, Length 4,832 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1-201ENSMUST00000180353 Ptpn13Q64512 2453 aa15.1■□□□□ 0.01
Sox1-201ENSMUST00000180353 Lama3Q61789 3330 aa15.1■□□□□ 0.01
Sox1-201ENSMUST00000180353 Igkv8-21A0A140T8P7 120 aa15.1■□□□□ 0.01
Sox1-201ENSMUST00000180353 6430550D23RikE9Q1X6 194 aa15.1■□□□□ 0.01
Sox1-201ENSMUST00000180353 Lrrk2Q5S006 2527 aa15.1■□□□□ 0.01
Sox1-201ENSMUST00000180353 Gm10267M0QWD8 85 aa15.1■□□□□ 0.01
Sox1-201ENSMUST00000180353 Col4a2P08122 1707 aa15.09■□□□□ 0.01
Sox1-201ENSMUST00000180353 AI606181Q8C7B9 129 aa15.08■□□□□ 0
Sox1-201ENSMUST00000180353 Ttc28Q80XJ3 2450 aa15.07■□□□□ 0
Sox1-201ENSMUST00000180353 Prr9Q8BV84 116 aa15.07■□□□□ 0
Sox1-201ENSMUST00000180353 A930009A15RikG3UYI6 118 aa15.07■□□□□ 0
Sox1-201ENSMUST00000180353 Gm3285A0A1W2P7U0 201 aa15.06■□□□□ 0
Sox1-201ENSMUST00000180353 Gm9903Q8C9Y8 129 aa15.06■□□□□ 0
Sox1-201ENSMUST00000180353 Gpha2Q925Q5 128 aa15.06■□□□□ 0
Sox1-201ENSMUST00000180353 Pla2g1bQ9Z0Y2 146 aa15.05■□□□□ -0
Sox1-201ENSMUST00000180353 Hivep2Q3UHF7 2430 aa15.05■□□□□ -0
Sox1-201ENSMUST00000180353 Wfdc10Q3V2J9 124 aa15.04■□□□□ -0
Sox1-201ENSMUST00000180353 Obox2E9PXV9 151 aa15.03■□□□□ -0
Sox1-201ENSMUST00000180353 Defb38Q7TNV7 63 aa15.03■□□□□ -0
Sox1-201ENSMUST00000180353 Defb13Q8R2I4 64 aa15.01□□□□□ -0.01
Sox1-201ENSMUST00000180353 Ighv2-9A0A075B5Q5 116 aa15□□□□□ -0.01
Sox1-201ENSMUST00000180353 Gm8439G3UWA7 96 aa15□□□□□ -0.01
Sox1-201ENSMUST00000180353 Ly6c2P0CW03 131 aa15□□□□□ -0.01
Sox1-201ENSMUST00000180353 Gm28374F6SG70 93 aa14.99□□□□□ -0.01
Sox1-201ENSMUST00000180353 Hivep3A2A884 2348 aa14.99□□□□□ -0.01
Sox1-201ENSMUST00000180353 Gm17689B3GLJ4 109 aa14.99□□□□□ -0.01
Sox1-201ENSMUST00000180353 Msrb1Q9JLC3 116 aa14.96□□□□□ -0.01
Sox1-201ENSMUST00000180353 CrygaP04345 174 aa14.95□□□□□ -0.02
Sox1-201ENSMUST00000180353 Igkv3-10A0A0G2JGN0 119 aa14.94□□□□□ -0.02
Sox1-201ENSMUST00000180353 Mrpl34Q99N91 92 aa14.94□□□□□ -0.02
Sox1-201ENSMUST00000180353 Gm3443F7CCV5 94 aa14.93□□□□□ -0.02
Sox1-201ENSMUST00000180353 P84750 121 aa14.93□□□□□ -0.02
Sox1-201ENSMUST00000180353 MobpQ9D2P8 170 aa14.92□□□□□ -0.02
Sox1-201ENSMUST00000180353 1810062G17RikG3X8Y2 129 aa14.92□□□□□ -0.02
Sox1-201ENSMUST00000180353 Bahcc1Q3UHR0 2643 aa14.91□□□□□ -0.02
Sox1-201ENSMUST00000180353 Gm17509Q9CZ61 145 aa14.91□□□□□ -0.02
Sox1-201ENSMUST00000180353 Defb37Q7TMD2 62 aa14.91□□□□□ -0.02
Sox1-201ENSMUST00000180353 Gm10643Q3URG9 111 aa14.9□□□□□ -0.02
Sox1-201ENSMUST00000180353 Cox6a2P43023 97 aa14.9□□□□□ -0.02
Sox1-201ENSMUST00000180353 Wfdc13Q5DQQ6 81 aa14.9□□□□□ -0.02
Sox1-201ENSMUST00000180353 Mki67E9PVX6 3177 aaKnown RBP14.89□□□□□ -0.03
Sox1-201ENSMUST00000180353 Igkv3-4A0A140T8Q4 119 aa14.88□□□□□ -0.03
Sox1-201ENSMUST00000180353 Coa5Q99M07 74 aa14.87□□□□□ -0.03
Sox1-201ENSMUST00000180353 CrygfQ9CXV3 174 aa14.86□□□□□ -0.03
Sox1-201ENSMUST00000180353 Gm10160F6Y577 67 aa14.85□□□□□ -0.03
Sox1-201ENSMUST00000180353 Wfdc15aQ8BH89 80 aa14.84□□□□□ -0.03
Sox1-201ENSMUST00000180353 Reg3aO09037 175 aa14.84□□□□□ -0.03
Sox1-201ENSMUST00000180353 CnbpP53996 178 aaKnown RBP14.84□□□□□ -0.03
Sox1-201ENSMUST00000180353 Setd2E9Q5F9 2537 aa14.83□□□□□ -0.04
Sox1-201ENSMUST00000180353 Igkv3-3A0A140T8Q0 119 aa14.83□□□□□ -0.04
Sox1-201ENSMUST00000180353 MtorQ9JLN9 2549 aa14.82□□□□□ -0.04
Sox1-201ENSMUST00000180353 Lama2Q60675 3118 aaKnown RBP14.82□□□□□ -0.04
Sox1-201ENSMUST00000180353 Gm43218A0A0G2JGT0 114 aa14.82□□□□□ -0.04
Sox1-201ENSMUST00000180353 Phxr4P15974 95 aa14.82□□□□□ -0.04
Sox1-201ENSMUST00000180353 FshbQ60687 130 aa14.82□□□□□ -0.04
Sox1-201ENSMUST00000180353 1700012A03RikQ9DAF1 130 aa14.81□□□□□ -0.04
Sox1-201ENSMUST00000180353 Gm5617Q91VN2 117 aa14.8□□□□□ -0.04
Sox1-201ENSMUST00000180353 Jbts17Q8CE72 3214 aa14.78□□□□□ -0.04
Sox1-201ENSMUST00000180353 C130032M10RikQ8C888 123 aa14.78□□□□□ -0.04
Sox1-201ENSMUST00000180353 Elof1P60003 83 aa14.77□□□□□ -0.04
Sox1-201ENSMUST00000180353 Limd2Q8BGB5 128 aa14.77□□□□□ -0.04
Sox1-201ENSMUST00000180353 Gm10770F7D043 238 aa14.77□□□□□ -0.05
Sox1-201ENSMUST00000180353 SmcpP15265 143 aa14.77□□□□□ -0.05
Sox1-201ENSMUST00000180353 Bri3P28662 125 aa14.77□□□□□ -0.05
Sox1-201ENSMUST00000180353 Zfp292Q9Z2U2 2698 aa14.77□□□□□ -0.05
Sox1-201ENSMUST00000180353 Krtap26-1Q9D7N2 215 aa14.76□□□□□ -0.05
Sox1-201ENSMUST00000180353 Cfap54Q8C6S9 3106 aa14.76□□□□□ -0.05
Sox1-201ENSMUST00000180353 Prune2Q52KR3 3084 aa14.76□□□□□ -0.05
Sox1-201ENSMUST00000180353 Fam229bQ8CF36 80 aa14.75□□□□□ -0.05
Sox1-201ENSMUST00000180353 Notch2O35516 2470 aa14.75□□□□□ -0.05
Sox1-201ENSMUST00000180353 Igkv8-19A0A0G2JFN8 121 aa14.74□□□□□ -0.05
Sox1-201ENSMUST00000180353 Usp34Q6ZQ93 3582 aa14.74□□□□□ -0.05
Sox1-201ENSMUST00000180353 Gm44790A0A0N4SV91 103 aa14.73□□□□□ -0.05
Sox1-201ENSMUST00000180353 Gm21886J3QJU9 214 aa14.72□□□□□ -0.05
Sox1-201ENSMUST00000180353 Gm28230A0A0A0MQ91 144 aa14.72□□□□□ -0.05
Sox1-201ENSMUST00000180353 TrrapQ80YV3 2565 aaKnown RBP14.71□□□□□ -0.05
Sox1-201ENSMUST00000180353 Q8K1L6 76 aa14.7□□□□□ -0.06
Sox1-201ENSMUST00000180353 PolqQ8CGS6 2544 aa14.68□□□□□ -0.06
Sox1-201ENSMUST00000180353 Abca12E9Q876 2595 aa14.68□□□□□ -0.06
Sox1-201ENSMUST00000180353 Defb50Q6TU36 73 aa14.67□□□□□ -0.06
Sox1-201ENSMUST00000180353 Zfp462B1AWL2 2495 aaKnown RBP14.67□□□□□ -0.06
Sox1-201ENSMUST00000180353 Tnrc18Q80WC3 2878 aa14.67□□□□□ -0.06
Sox1-201ENSMUST00000180353 Gm9767G3X930 207 aa14.66□□□□□ -0.06
Sox1-201ENSMUST00000180353 Igkv8-28A0A0G2JE47 121 aa14.66□□□□□ -0.06
Sox1-201ENSMUST00000180353 Gm20661K7N787 53 aa14.66□□□□□ -0.06
Sox1-201ENSMUST00000180353 SycnQ8VCK7 134 aa14.63□□□□□ -0.07
Sox1-201ENSMUST00000180353 1700018G05RikA0A1B0GSI2 66 aa14.62□□□□□ -0.07
Sox1-201ENSMUST00000180353 Znf414Q9DCK4 299 aa14.61□□□□□ -0.07
Sox1-201ENSMUST00000180353 Gm10772F7AIG4 85 aa14.59□□□□□ -0.07
Sox1-201ENSMUST00000180353 Defb2P82020 71 aa14.59□□□□□ -0.07
Sox1-201ENSMUST00000180353 D730001G18RikA0A087WQU7 115 aa14.58□□□□□ -0.07
Sox1-201ENSMUST00000180353 A730009L09RikA0A1B0GS82 72 aa14.58□□□□□ -0.08
Sox1-201ENSMUST00000180353 Ighv8-13A0A075B5Y0 101 aa14.58□□□□□ -0.08
Sox1-201ENSMUST00000180353 Cystm1Q8K353 104 aa14.58□□□□□ -0.08
Sox1-201ENSMUST00000180353 Chchd10Q7TNL9 138 aa14.57□□□□□ -0.08
Sox1-201ENSMUST00000180353 Q8BT88 171 aa14.55□□□□□ -0.08
Sox1-201ENSMUST00000180353 Myo18bE9PV66 2605 aa14.54□□□□□ -0.08
Sox1-201ENSMUST00000180353 Dmbt1Q60997 2085 aa14.54□□□□□ -0.08
Sox1-201ENSMUST00000180353 A930002H24RikQ8C8Y3 163 aa14.53□□□□□ -0.08
Sox1-201ENSMUST00000180353 Psors1c2Q80ZC9 134 aa14.52□□□□□ -0.08
Retrieved 100 of 22,080 RNA–protein pairs in 50.7 ms