RNA–Protein interactions for RNA: ENSMUST00000169486.8

Ebf3-204, Transcript of Transcription factor COE3, mousemouse

APPRIS ALT1 TSL 5 BASIC

Gene Ebf3, Length 4,994 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3-204ENSMUST00000169486 Abca12E9Q876 2595 aa12.26□□□□□ -0.45
Ebf3-204ENSMUST00000169486 P84750 121 aa12.25□□□□□ -0.45
Ebf3-204ENSMUST00000169486 Nupr2Q497P3 102 aa12.25□□□□□ -0.45
Ebf3-204ENSMUST00000169486 Defb2P82020 71 aa12.23□□□□□ -0.45
Ebf3-204ENSMUST00000169486 Gm5464Q3UY29 175 aa12.23□□□□□ -0.45
Ebf3-204ENSMUST00000169486 Q8K1L6 76 aa12.23□□□□□ -0.45
Ebf3-204ENSMUST00000169486 TrioQ0KL02 3102 aa12.23□□□□□ -0.45
Ebf3-204ENSMUST00000169486 Igkv3-12A0A140T8P0 119 aa12.23□□□□□ -0.45
Ebf3-204ENSMUST00000169486 Hcfc1Q61191 2045 aaKnown RBP12.23□□□□□ -0.45
Ebf3-204ENSMUST00000169486 CrygeQ03740 174 aa12.23□□□□□ -0.45
Ebf3-204ENSMUST00000169486 Odf3l2Q3TZ65 277 aa12.23□□□□□ -0.45
Ebf3-204ENSMUST00000169486 Epg5Q80TA9 2572 aa12.22□□□□□ -0.45
Ebf3-204ENSMUST00000169486 Ighv1-56A0A0A6YXG2 117 aa12.21□□□□□ -0.45
Ebf3-204ENSMUST00000169486 Ntn5Q3UQ22 452 aa12.21□□□□□ -0.46
Ebf3-204ENSMUST00000169486 Ighv2-9A0A075B5Q5 116 aa12.19□□□□□ -0.46
Ebf3-204ENSMUST00000169486 Gm17509Q9CZ61 145 aa12.19□□□□□ -0.46
Ebf3-204ENSMUST00000169486 Sostdc1Q9CQN4 206 aa12.18□□□□□ -0.46
Ebf3-204ENSMUST00000169486 Gm10570F6VB42 170 aa12.18□□□□□ -0.46
Ebf3-204ENSMUST00000169486 4930518I15RikQ3V2W7 57 aa12.18□□□□□ -0.46
Ebf3-204ENSMUST00000169486 Csdc2Q91YQ3 154 aa12.18□□□□□ -0.46
Ebf3-204ENSMUST00000169486 Usp9yF8VPU6 2556 aa12.17□□□□□ -0.46
Ebf3-204ENSMUST00000169486 Gm9887F6RFI0 207 aa12.16□□□□□ -0.46
Ebf3-204ENSMUST00000169486 Cd164Q9R0L9 197 aa12.16□□□□□ -0.46
Ebf3-204ENSMUST00000169486 AI854703Q8BIN3 203 aa12.15□□□□□ -0.46
Ebf3-204ENSMUST00000169486 Unc79Q0KK59 2596 aa12.15□□□□□ -0.46
Ebf3-204ENSMUST00000169486 C130032M10RikQ8C888 123 aa12.15□□□□□ -0.46
Ebf3-204ENSMUST00000169486 Col27a1Q5QNQ9 1845 aa12.15□□□□□ -0.46
Ebf3-204ENSMUST00000169486 Defb37Q7TMD2 62 aa12.14□□□□□ -0.47
Ebf3-204ENSMUST00000169486 Nbeal1E9PYP2 2688 aa12.14□□□□□ -0.47
Ebf3-204ENSMUST00000169486 4930519P11RikQ9CUJ8 166 aa12.13□□□□□ -0.47
Ebf3-204ENSMUST00000169486 Bri3P28662 125 aa12.13□□□□□ -0.47
Ebf3-204ENSMUST00000169486 Coa6Q8BGD8 79 aa12.13□□□□□ -0.47
Ebf3-204ENSMUST00000169486 Lama3Q61789 3330 aa12.12□□□□□ -0.47
Ebf3-204ENSMUST00000169486 Ighv8-13A0A075B5Y0 101 aa12.12□□□□□ -0.47
Ebf3-204ENSMUST00000169486 Gm16485Q8C4B7 115 aa12.1□□□□□ -0.47
Ebf3-204ENSMUST00000169486 Znf706Q9D115 76 aaKnown RBP12.1□□□□□ -0.47
Ebf3-204ENSMUST00000169486 H2al1mQ9DAD9 105 aa12.1□□□□□ -0.47
Ebf3-204ENSMUST00000169486 Igkv8-30A0A140T8M3 121 aa12.09□□□□□ -0.47
Ebf3-204ENSMUST00000169486 Wfdc3Q14AE4 130 aa12.09□□□□□ -0.47
Ebf3-204ENSMUST00000169486 Fam19a3Q7TPG6 132 aa12.09□□□□□ -0.47
Ebf3-204ENSMUST00000169486 Gm10197F6QEY5 67 aa12.09□□□□□ -0.47
Ebf3-204ENSMUST00000169486 CrygaP04345 174 aa12.09□□□□□ -0.47
Ebf3-204ENSMUST00000169486 Q9DAA7 145 aa12.09□□□□□ -0.47
Ebf3-204ENSMUST00000169486 Usp34Q6ZQ93 3582 aa12.07□□□□□ -0.48
Ebf3-204ENSMUST00000169486 Prr13Q9CQJ5 137 aa12.07□□□□□ -0.48
Ebf3-204ENSMUST00000169486 Spint4Q9D263 159 aa12.07□□□□□ -0.48
Ebf3-204ENSMUST00000169486 Reg3aO09037 175 aa12.07□□□□□ -0.48
Ebf3-204ENSMUST00000169486 Col4a2P08122 1707 aa12.07□□□□□ -0.48
Ebf3-204ENSMUST00000169486 MobpQ9D2P8 170 aa12.06□□□□□ -0.48
Ebf3-204ENSMUST00000169486 Lama2Q60675 3118 aaKnown RBP12.04□□□□□ -0.48
Ebf3-204ENSMUST00000169486 Gm28230A0A0A0MQ91 144 aa12.04□□□□□ -0.48
Ebf3-204ENSMUST00000169486 Msrb1Q9JLC3 116 aa12.04□□□□□ -0.48
Ebf3-204ENSMUST00000169486 6430550D23RikE9Q1X6 194 aa12.04□□□□□ -0.48
Ebf3-204ENSMUST00000169486 Ighv2-5A0A0A6YY69 116 aa12.02□□□□□ -0.48
Ebf3-204ENSMUST00000169486 Krtap16-1A2A5X5 502 aa12.02□□□□□ -0.48
Ebf3-204ENSMUST00000169486 Igkv8-27A0A0G2JF28 120 aa12.02□□□□□ -0.48
Ebf3-204ENSMUST00000169486 Zfp292Q9Z2U2 2698 aa12.02□□□□□ -0.49
Ebf3-204ENSMUST00000169486 Gm4707V9GXN5 68 aa12.02□□□□□ -0.49
Ebf3-204ENSMUST00000169486 A730009L09RikA0A1B0GS82 72 aa12.01□□□□□ -0.49
Ebf3-204ENSMUST00000169486 Rps28P62858 69 aaKnown RBP12.01□□□□□ -0.49
Ebf3-204ENSMUST00000169486 Cep192E9Q4Y4 2514 aaKnown RBP12.01□□□□□ -0.49
Ebf3-204ENSMUST00000169486 Gm43218A0A0G2JGT0 114 aa12.01□□□□□ -0.49
Ebf3-204ENSMUST00000169486 Cox6a2P43023 97 aa12.01□□□□□ -0.49
Ebf3-204ENSMUST00000169486 Mrpl34Q99N91 92 aa12□□□□□ -0.49
Ebf3-204ENSMUST00000169486 P01819 144 aa12□□□□□ -0.49
Ebf3-204ENSMUST00000169486 A530084C06RikQ3UTW2 186 aa11.99□□□□□ -0.49
Ebf3-204ENSMUST00000169486 CenpfE9Q3P4 2997 aaKnown RBP11.98□□□□□ -0.49
Ebf3-204ENSMUST00000169486 Col5a1O88207 1838 aa11.98□□□□□ -0.49
Ebf3-204ENSMUST00000169486 Igkv3-7A0A0G2JE31 119 aa11.97□□□□□ -0.49
Ebf3-204ENSMUST00000169486 Srsf12Q8C8K3 266 aa11.97□□□□□ -0.49
Ebf3-204ENSMUST00000169486 Bean1Q9EQG5 255 aa11.97□□□□□ -0.49
Ebf3-204ENSMUST00000169486 Wfdc17Q5SSJ1 76 aa11.96□□□□□ -0.49
Ebf3-204ENSMUST00000169486 Adm2Q7TNK8 150 aa11.96□□□□□ -0.5
Ebf3-204ENSMUST00000169486 Wfdc6bF6ULY1 148 aa11.95□□□□□ -0.5
Ebf3-204ENSMUST00000169486 1700018G05RikA0A1B0GSI2 66 aa11.94□□□□□ -0.5
Ebf3-204ENSMUST00000169486 2310034G01RikA0A286YDL3 209 aa11.93□□□□□ -0.5
Ebf3-204ENSMUST00000169486 7530416G11RikJ3QJX6 159 aa11.93□□□□□ -0.5
Ebf3-204ENSMUST00000169486 Gm21886J3QJU9 214 aa11.93□□□□□ -0.5
Ebf3-204ENSMUST00000169486 Ighv2-2A0A075B5P8 116 aa11.92□□□□□ -0.5
Ebf3-204ENSMUST00000169486 P01821 116 aa11.92□□□□□ -0.5
Ebf3-204ENSMUST00000169486 1600014C23RikQ9DAX4 101 aa11.92□□□□□ -0.5
Ebf3-204ENSMUST00000169486 Eif4ebp3Q80VV3 101 aa11.91□□□□□ -0.5
Ebf3-204ENSMUST00000169486 Igkv8-28A0A0G2JE47 121 aa11.89□□□□□ -0.51
Ebf3-204ENSMUST00000169486 Gm44790A0A0N4SV91 103 aa11.89□□□□□ -0.51
Ebf3-204ENSMUST00000169486 CicQ924A2 2510 aa11.89□□□□□ -0.51
Ebf3-204ENSMUST00000169486 Gm10160F6Y577 67 aa11.88□□□□□ -0.51
Ebf3-204ENSMUST00000169486 Gm9903Q8C9Y8 129 aa11.87□□□□□ -0.51
Ebf3-204ENSMUST00000169486 Ankrd11E9Q4F7 2643 aa11.87□□□□□ -0.51
Ebf3-204ENSMUST00000169486 Elof1P60003 83 aa11.87□□□□□ -0.51
Ebf3-204ENSMUST00000169486 Krtap26-1Q9D7N2 215 aa11.86□□□□□ -0.51
Ebf3-204ENSMUST00000169486 Defb39Q70KL3 74 aa11.86□□□□□ -0.51
Ebf3-204ENSMUST00000169486 Gm17689B3GLJ4 109 aa11.85□□□□□ -0.51
Ebf3-204ENSMUST00000169486 Gm10770F7D043 238 aa11.85□□□□□ -0.51
Ebf3-204ENSMUST00000169486 Gm10308Q9CVR5 141 aa11.83□□□□□ -0.52
Ebf3-204ENSMUST00000169486 Gm10772F7AIG4 85 aa11.83□□□□□ -0.52
Ebf3-204ENSMUST00000169486 Gm26661M0QWV4 156 aa11.81□□□□□ -0.52
Ebf3-204ENSMUST00000169486 Ly6g6cQ9Z1Q4 126 aa11.81□□□□□ -0.52
Ebf3-204ENSMUST00000169486 Chchd10Q7TNL9 138 aa11.8□□□□□ -0.52
Ebf3-204ENSMUST00000169486 Dmac1Q9CQ00 111 aa11.8□□□□□ -0.52
Ebf3-204ENSMUST00000169486 Defb10Q8R2I8 73 aa11.79□□□□□ -0.52
Retrieved 100 of 22,080 RNA–protein pairs in 60.2 ms