RNA–Protein interactions for RNA: ENSMUST00000139560.7

Ndc1-204, Transcript of Nucleoporin NDC1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ndc1, Length 4,584 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc1-204ENSMUST00000139560 Fgf23Q9EPC2 251 aa8.42□□□□□ -1.06
Ndc1-204ENSMUST00000139560 Gm11011D3Z3L9 86 aa8.42□□□□□ -1.06
Ndc1-204ENSMUST00000139560 Chd6A3KFM7 2711 aa8.42□□□□□ -1.06
Ndc1-204ENSMUST00000139560 Hectd1Q69ZR2 2618 aaKnown RBP8.42□□□□□ -1.06
Ndc1-204ENSMUST00000139560 Gm10300Q8C8P7 189 aa8.42□□□□□ -1.06
Ndc1-204ENSMUST00000139560 Cox7bP56393 80 aa8.41□□□□□ -1.06
Ndc1-204ENSMUST00000139560 FshbQ60687 130 aa8.41□□□□□ -1.06
Ndc1-204ENSMUST00000139560 CrygfQ9CXV3 174 aa8.41□□□□□ -1.06
Ndc1-204ENSMUST00000139560 Igkv3-5A0A140T8M6 119 aa8.41□□□□□ -1.06
Ndc1-204ENSMUST00000139560 Gm5142Q8C5X9 133 aa8.41□□□□□ -1.06
Ndc1-204ENSMUST00000139560 Gm10509O88255 85 aa8.4□□□□□ -1.06
Ndc1-204ENSMUST00000139560 Fam19a5Q91WE9 132 aa8.4□□□□□ -1.06
Ndc1-204ENSMUST00000139560 Ighv1-59A0A0A6YXE0 117 aa8.39□□□□□ -1.07
Ndc1-204ENSMUST00000139560 4930564D02RikQ9D4S4 103 aa8.39□□□□□ -1.07
Ndc1-204ENSMUST00000139560 Ighv10-3A0A075B5T6 119 aa8.38□□□□□ -1.07
Ndc1-204ENSMUST00000139560 Apoc4Q61268 124 aa8.38□□□□□ -1.07
Ndc1-204ENSMUST00000139560 A830005F24RikQ8BRT5 167 aa8.38□□□□□ -1.07
Ndc1-204ENSMUST00000139560 Gm10577Q3UDV9 132 aa8.37□□□□□ -1.07
Ndc1-204ENSMUST00000139560 Eif4ebp1Q60876 117 aa8.37□□□□□ -1.07
Ndc1-204ENSMUST00000139560 Pde6gP09174 87 aa8.37□□□□□ -1.07
Ndc1-204ENSMUST00000139560 Gpha2Q925Q5 128 aa8.37□□□□□ -1.07
Ndc1-204ENSMUST00000139560 Csmd1Q923L3 3564 aa8.36□□□□□ -1.07
Ndc1-204ENSMUST00000139560 Gm10845Q3UNY9 185 aa8.36□□□□□ -1.07
Ndc1-204ENSMUST00000139560 Defb42Q8BVB5 75 aa8.36□□□□□ -1.07
Ndc1-204ENSMUST00000139560 Gm10322F7D7I4 111 aa8.35□□□□□ -1.07
Ndc1-204ENSMUST00000139560 A930009A15RikG3UYI6 118 aa8.35□□□□□ -1.07
Ndc1-204ENSMUST00000139560 Col4a2P08122 1707 aa8.35□□□□□ -1.07
Ndc1-204ENSMUST00000139560 Ighv10-1A0A0B4J1J6 119 aa8.35□□□□□ -1.07
Ndc1-204ENSMUST00000139560 Gm3443F7CCV5 94 aa8.35□□□□□ -1.07
Ndc1-204ENSMUST00000139560 4930518I15RikQ3V2W7 57 aa8.34□□□□□ -1.07
Ndc1-204ENSMUST00000139560 Gm9922Q8C3P1 144 aa8.34□□□□□ -1.07
Ndc1-204ENSMUST00000139560 Gm10267M0QWD8 85 aa8.34□□□□□ -1.07
Ndc1-204ENSMUST00000139560 FlnaQ8BTM8 2647 aaKnown RBP8.34□□□□□ -1.07
Ndc1-204ENSMUST00000139560 Bri3P28662 125 aa8.34□□□□□ -1.08
Ndc1-204ENSMUST00000139560 BaalcQ8VHV1 145 aa8.34□□□□□ -1.08
Ndc1-204ENSMUST00000139560 Prr13Q9CQJ5 137 aa8.34□□□□□ -1.08
Ndc1-204ENSMUST00000139560 Plac8l1Q08EJ0 177 aa8.33□□□□□ -1.08
Ndc1-204ENSMUST00000139560 Csmd2V9GX34 3611 aa8.33□□□□□ -1.08
Ndc1-204ENSMUST00000139560 H2al1bA0A087WP11 105 aa8.33□□□□□ -1.08
Ndc1-204ENSMUST00000139560 Gm3250E9Q1M3 230 aa8.33□□□□□ -1.08
Ndc1-204ENSMUST00000139560 Defb45Q3V490 66 aa8.33□□□□□ -1.08
Ndc1-204ENSMUST00000139560 Defb37Q7TMD2 62 aa8.33□□□□□ -1.08
Ndc1-204ENSMUST00000139560 AI854703Q8BIN3 203 aa8.32□□□□□ -1.08
Ndc1-204ENSMUST00000139560 Ndufc1Q9CQY9 76 aa8.32□□□□□ -1.08
Ndc1-204ENSMUST00000139560 9430015G10RikA2ASP7 199 aa8.32□□□□□ -1.08
Ndc1-204ENSMUST00000139560 Rpl28P41105 137 aaKnown RBP8.32□□□□□ -1.08
Ndc1-204ENSMUST00000139560 Q9DAB9 146 aa8.31□□□□□ -1.08
Ndc1-204ENSMUST00000139560 Ly6gP35461 111 aa8.3□□□□□ -1.08
Ndc1-204ENSMUST00000139560 BC025920Q3US60 128 aa8.3□□□□□ -1.08
Ndc1-204ENSMUST00000139560 Defb13Q8R2I4 64 aa8.3□□□□□ -1.08
Ndc1-204ENSMUST00000139560 4930519P11RikQ9CUJ8 166 aa8.3□□□□□ -1.08
Ndc1-204ENSMUST00000139560 DspE9Q557 2883 aaKnown RBP8.3□□□□□ -1.08
Ndc1-204ENSMUST00000139560 Prr9Q8BV84 116 aa8.3□□□□□ -1.08
Ndc1-204ENSMUST00000139560 Chchd7Q8K2Q5 85 aa8.3□□□□□ -1.08
Ndc1-204ENSMUST00000139560 Wfdc15aQ8BH89 80 aa8.3□□□□□ -1.08
Ndc1-204ENSMUST00000139560 Nsd1O88491 2588 aaKnown RBP8.29□□□□□ -1.08
Ndc1-204ENSMUST00000139560 Dmbt1Q60997 2085 aa8.29□□□□□ -1.08
Ndc1-204ENSMUST00000139560 Smg1Q8BKX6 3658 aaKnown RBP8.29□□□□□ -1.08
Ndc1-204ENSMUST00000139560 Gm9573F7C950 1606 aa8.29□□□□□ -1.08
Ndc1-204ENSMUST00000139560 Sostdc1Q9CQN4 206 aa8.29□□□□□ -1.08
Ndc1-204ENSMUST00000139560 NipblQ6KCD5 2798 aaKnown RBP8.29□□□□□ -1.08
Ndc1-204ENSMUST00000139560 D730001G18RikA0A087WQU7 115 aa8.29□□□□□ -1.08
Ndc1-204ENSMUST00000139560 Dmxl2Q8BPN8 3032 aa8.29□□□□□ -1.08
Ndc1-204ENSMUST00000139560 Gm5153P01627 120 aa8.29□□□□□ -1.08
Ndc1-204ENSMUST00000139560 Nupr2Q497P3 102 aa8.29□□□□□ -1.08
Ndc1-204ENSMUST00000139560 Igkv3-3A0A140T8Q0 119 aa8.28□□□□□ -1.08
Ndc1-204ENSMUST00000139560 Ifitm6A0A1B0GS75 124 aa8.28□□□□□ -1.08
Ndc1-204ENSMUST00000139560 P06329 120 aa8.28□□□□□ -1.08
Ndc1-204ENSMUST00000139560 3110070M22RikQ9DAQ7 118 aa8.28□□□□□ -1.08
Ndc1-204ENSMUST00000139560 Obox2E9PXV9 151 aa8.28□□□□□ -1.08
Ndc1-204ENSMUST00000139560 Gm5464Q3UY29 175 aa8.28□□□□□ -1.08
Ndc1-204ENSMUST00000139560 Atox1O08997 68 aaKnown RBP8.27□□□□□ -1.09
Ndc1-204ENSMUST00000139560 Cd164l2Q9D6W7 172 aa8.27□□□□□ -1.09
Ndc1-204ENSMUST00000139560 Gm19935A0A1B0GSF9 52 aa8.27□□□□□ -1.09
Ndc1-204ENSMUST00000139560 Tep1P97499 2629 aa8.26□□□□□ -1.09
Ndc1-204ENSMUST00000139560 CrygeQ03740 174 aa8.26□□□□□ -1.09
Ndc1-204ENSMUST00000139560 Fam19a3Q7TPG6 132 aa8.26□□□□□ -1.09
Ndc1-204ENSMUST00000139560 Gm4707V9GXN5 68 aa8.25□□□□□ -1.09
Ndc1-204ENSMUST00000139560 Stab1Q8R4Y4 2571 aa8.25□□□□□ -1.09
Ndc1-204ENSMUST00000139560 Krtap27-1E9PX37 202 aa8.25□□□□□ -1.09
Ndc1-204ENSMUST00000139560 Tex15F8VPN2 2785 aa8.25□□□□□ -1.09
Ndc1-204ENSMUST00000139560 Gm12353A2AGJ4 60 aa8.25□□□□□ -1.09
Ndc1-204ENSMUST00000139560 Igkv3-4A0A140T8Q4 119 aa8.24□□□□□ -1.09
Ndc1-204ENSMUST00000139560 A830031A19RikQ8BNT5 113 aa8.24□□□□□ -1.09
Ndc1-204ENSMUST00000139560 Gm10337F7DEP7 55 aa8.24□□□□□ -1.09
Ndc1-204ENSMUST00000139560 Wfdc3Q14AE4 130 aa8.24□□□□□ -1.09
Ndc1-204ENSMUST00000139560 Eif4ebp3Q80VV3 101 aa8.24□□□□□ -1.09
Ndc1-204ENSMUST00000139560 SycnQ8VCK7 134 aa8.24□□□□□ -1.09
Ndc1-204ENSMUST00000139560 1700074P13RikQ9D9G7 251 aa8.24□□□□□ -1.09
Ndc1-204ENSMUST00000139560 Gm9887F6RFI0 207 aa8.23□□□□□ -1.09
Ndc1-204ENSMUST00000139560 Pou2af1Q64693 256 aa8.23□□□□□ -1.09
Ndc1-204ENSMUST00000139560 Gm10549Q3URY4 149 aa8.22□□□□□ -1.09
Ndc1-204ENSMUST00000139560 Tcl1b3P56842 122 aa8.22□□□□□ -1.09
Ndc1-204ENSMUST00000139560 Defb10Q8R2I8 73 aa8.22□□□□□ -1.09
Ndc1-204ENSMUST00000139560 Csdc2Q91YQ3 154 aa8.22□□□□□ -1.09
Ndc1-204ENSMUST00000139560 Cmya5Q70KF4 3739 aa8.21□□□□□ -1.09
Ndc1-204ENSMUST00000139560 Wfdc10Q3V2J9 124 aa8.21□□□□□ -1.1
Ndc1-204ENSMUST00000139560 6430550D23RikE9Q1X6 194 aa8.21□□□□□ -1.1
Ndc1-204ENSMUST00000139560 A0A286YE49 62 aa8.2□□□□□ -1.1
Ndc1-204ENSMUST00000139560 H2al1aQ5M8Q2 105 aa8.2□□□□□ -1.1
Retrieved 100 of 22,080 RNA–protein pairs in 62.4 ms