RNA–Protein interactions for RNA: ENSMUST00000102754.10

Pkp4-202, Transcript of Plakophilin-4, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Pkp4, Length 4,614 nt, Biotype protein coding, Subcellular localisation Pseudopodium .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pkp4-202ENSMUST00000102754 Ighv2-9-1A0A075B697 116 aa12.39□□□□□ -0.43
Pkp4-202ENSMUST00000102754 Lrrc37aB1AWG4 3215 aa12.39□□□□□ -0.43
Pkp4-202ENSMUST00000102754 Vpreb1P13372 142 aa12.39□□□□□ -0.43
Pkp4-202ENSMUST00000102754 Crip2Q9DCT8 208 aaKnown RBP12.39□□□□□ -0.43
Pkp4-202ENSMUST00000102754 Myo15bI7HPW8 3033 aa12.37□□□□□ -0.43
Pkp4-202ENSMUST00000102754 Rpl28P41105 137 aaKnown RBP12.36□□□□□ -0.43
Pkp4-202ENSMUST00000102754 Gm10845Q3UNY9 185 aa12.36□□□□□ -0.43
Pkp4-202ENSMUST00000102754 Gm11011D3Z3L9 86 aa12.36□□□□□ -0.43
Pkp4-202ENSMUST00000102754 Ankrd17Q99NH0 2603 aaKnown RBP12.35□□□□□ -0.43
Pkp4-202ENSMUST00000102754 CenpwQ3URR0 86 aa12.35□□□□□ -0.43
Pkp4-202ENSMUST00000102754 4930556J24RikQ9D4U7 146 aa12.35□□□□□ -0.43
Pkp4-202ENSMUST00000102754 Trav14-1A0A0G2JF94 121 aa12.34□□□□□ -0.43
Pkp4-202ENSMUST00000102754 Tcl1b5P56845 121 aa12.34□□□□□ -0.43
Pkp4-202ENSMUST00000102754 Gm4707V9GXN5 68 aa12.33□□□□□ -0.44
Pkp4-202ENSMUST00000102754 Mast4Q811L6 2618 aa12.33□□□□□ -0.44
Pkp4-202ENSMUST00000102754 Igkv8-21A0A140T8P7 120 aa12.33□□□□□ -0.44
Pkp4-202ENSMUST00000102754 BC025920Q3US60 128 aa12.33□□□□□ -0.44
Pkp4-202ENSMUST00000102754 Frem2Q6NVD0 3160 aa12.33□□□□□ -0.44
Pkp4-202ENSMUST00000102754 SptssbQ925E8 76 aa12.33□□□□□ -0.44
Pkp4-202ENSMUST00000102754 FrylF8VQ05 3007 aa12.33□□□□□ -0.44
Pkp4-202ENSMUST00000102754 TeppQ6IMH0 216 aa12.32□□□□□ -0.44
Pkp4-202ENSMUST00000102754 AspmQ8CJ27 3122 aa12.32□□□□□ -0.44
Pkp4-202ENSMUST00000102754 SvipQ3UZP4 77 aa12.31□□□□□ -0.44
Pkp4-202ENSMUST00000102754 Atox1O08997 68 aaKnown RBP12.31□□□□□ -0.44
Pkp4-202ENSMUST00000102754 Ifitm6A0A1B0GS75 124 aa12.3□□□□□ -0.44
Pkp4-202ENSMUST00000102754 MgaA2AWL7 3003 aaKnown RBP12.29□□□□□ -0.44
Pkp4-202ENSMUST00000102754 Ccdc179J3QM76 67 aa12.29□□□□□ -0.44
Pkp4-202ENSMUST00000102754 3110070M22RikQ9DAQ7 118 aa12.29□□□□□ -0.44
Pkp4-202ENSMUST00000102754 Brca2P97929 3329 aa12.29□□□□□ -0.44
Pkp4-202ENSMUST00000102754 Defb38Q7TNV7 63 aa12.29□□□□□ -0.44
Pkp4-202ENSMUST00000102754 Dmxl1Q6PNC0 3013 aa12.29□□□□□ -0.44
Pkp4-202ENSMUST00000102754 Fbn2Q61555 2907 aa12.28□□□□□ -0.44
Pkp4-202ENSMUST00000102754 Ndufs5Q99LY9 106 aa12.28□□□□□ -0.44
Pkp4-202ENSMUST00000102754 Ighv2-9A0A075B5Q5 116 aa12.28□□□□□ -0.44
Pkp4-202ENSMUST00000102754 Lama1P19137 3084 aa12.27□□□□□ -0.44
Pkp4-202ENSMUST00000102754 Znf580Q9DB38 172 aa12.27□□□□□ -0.45
Pkp4-202ENSMUST00000102754 Gm10549Q3URY4 149 aa12.26□□□□□ -0.45
Pkp4-202ENSMUST00000102754 Hectd1Q69ZR2 2618 aaKnown RBP12.26□□□□□ -0.45
Pkp4-202ENSMUST00000102754 NpwA0A1L1STR8 176 aa12.26□□□□□ -0.45
Pkp4-202ENSMUST00000102754 Zfand2aQ9JII7 171 aa12.26□□□□□ -0.45
Pkp4-202ENSMUST00000102754 Gm3250E9Q1M3 230 aa12.25□□□□□ -0.45
Pkp4-202ENSMUST00000102754 Psmb11Q8BG41 302 aa12.25□□□□□ -0.45
Pkp4-202ENSMUST00000102754 Odf3l2Q3TZ65 277 aa12.24□□□□□ -0.45
Pkp4-202ENSMUST00000102754 Gm16485Q8C4B7 115 aa12.24□□□□□ -0.45
Pkp4-202ENSMUST00000102754 FlnaQ8BTM8 2647 aaKnown RBP12.24□□□□□ -0.45
Pkp4-202ENSMUST00000102754 KalrnA2CG49 2964 aa12.23□□□□□ -0.45
Pkp4-202ENSMUST00000102754 H2al1bA0A087WP11 105 aa12.23□□□□□ -0.45
Pkp4-202ENSMUST00000102754 Q8K1L6 76 aa12.23□□□□□ -0.45
Pkp4-202ENSMUST00000102754 A0A286YE49 62 aa12.22□□□□□ -0.45
Pkp4-202ENSMUST00000102754 Srsf12Q8C8K3 266 aa12.22□□□□□ -0.45
Pkp4-202ENSMUST00000102754 Igkv3-12A0A140T8P0 119 aa12.21□□□□□ -0.46
Pkp4-202ENSMUST00000102754 Gm5153P01627 120 aa12.21□□□□□ -0.46
Pkp4-202ENSMUST00000102754 Kmt2bO08550 2713 aa12.21□□□□□ -0.46
Pkp4-202ENSMUST00000102754 Gm20604F8WIA3 75 aa12.2□□□□□ -0.46
Pkp4-202ENSMUST00000102754 Gm10267M0QWD8 85 aa12.2□□□□□ -0.46
Pkp4-202ENSMUST00000102754 Ash1lQ99MY8 2958 aa12.2□□□□□ -0.46
Pkp4-202ENSMUST00000102754 Sprr2jO70561 109 aa12.19□□□□□ -0.46
Pkp4-202ENSMUST00000102754 Ighv8-13A0A075B5Y0 101 aa12.18□□□□□ -0.46
Pkp4-202ENSMUST00000102754 Celsr3Q91ZI0 3301 aa12.18□□□□□ -0.46
Pkp4-202ENSMUST00000102754 Defb10Q8R2I8 73 aa12.17□□□□□ -0.46
Pkp4-202ENSMUST00000102754 Chd6A3KFM7 2711 aa12.17□□□□□ -0.46
Pkp4-202ENSMUST00000102754 Cdip1Q9DB75 208 aa12.17□□□□□ -0.46
Pkp4-202ENSMUST00000102754 Col6a3E9PWQ3 3284 aa12.17□□□□□ -0.46
Pkp4-202ENSMUST00000102754 Sec61gP60060 68 aa12.15□□□□□ -0.46
Pkp4-202ENSMUST00000102754 Ly6g6cQ9Z1Q4 126 aa12.15□□□□□ -0.46
Pkp4-202ENSMUST00000102754 Gm17509Q9CZ61 145 aa12.15□□□□□ -0.46
Pkp4-202ENSMUST00000102754 Wfdc3Q14AE4 130 aa12.14□□□□□ -0.47
Pkp4-202ENSMUST00000102754 Smr3aQ61900 147 aa12.14□□□□□ -0.47
Pkp4-202ENSMUST00000102754 FryE9Q8I9 3020 aa12.14□□□□□ -0.47
Pkp4-202ENSMUST00000102754 Cd164Q9R0L9 197 aa12.13□□□□□ -0.47
Pkp4-202ENSMUST00000102754 Defb37Q7TMD2 62 aa12.12□□□□□ -0.47
Pkp4-202ENSMUST00000102754 1700074P13RikQ9D9G7 251 aa12.12□□□□□ -0.47
Pkp4-202ENSMUST00000102754 Pou2af1Q64693 256 aa12.12□□□□□ -0.47
Pkp4-202ENSMUST00000102754 HrnrQ8VHD8 2496 aa12.12□□□□□ -0.47
Pkp4-202ENSMUST00000102754 Defb45Q3V490 66 aa12.11□□□□□ -0.47
Pkp4-202ENSMUST00000102754 C130032M10RikQ8C888 123 aa12.11□□□□□ -0.47
Pkp4-202ENSMUST00000102754 1600014C23RikQ9DAX4 101 aa12.11□□□□□ -0.47
Pkp4-202ENSMUST00000102754 Ubr5Q80TP3 2792 aa12.1□□□□□ -0.47
Pkp4-202ENSMUST00000102754 CrygaP04345 174 aa12.1□□□□□ -0.47
Pkp4-202ENSMUST00000102754 Sostdc1Q9CQN4 206 aa12.1□□□□□ -0.47
Pkp4-202ENSMUST00000102754 9230102O04RikA2ASX7 82 aa12.09□□□□□ -0.47
Pkp4-202ENSMUST00000102754 P84750 121 aa12.09□□□□□ -0.47
Pkp4-202ENSMUST00000102754 A830031A19RikQ8BNT5 113 aa12.09□□□□□ -0.47
Pkp4-202ENSMUST00000102754 Znf706Q9D115 76 aaKnown RBP12.08□□□□□ -0.48
Pkp4-202ENSMUST00000102754 H2al1aQ5M8Q2 105 aa12.08□□□□□ -0.48
Pkp4-202ENSMUST00000102754 Adm2Q7TNK8 150 aa12.08□□□□□ -0.48
Pkp4-202ENSMUST00000102754 H2al1eQ810S6 105 aa12.08□□□□□ -0.48
Pkp4-202ENSMUST00000102754 Igkv8-30A0A140T8M3 121 aa12.07□□□□□ -0.48
Pkp4-202ENSMUST00000102754 Stab1Q8R4Y4 2571 aa12.07□□□□□ -0.48
Pkp4-202ENSMUST00000102754 Q9DAA7 145 aa12.07□□□□□ -0.48
Pkp4-202ENSMUST00000102754 MobpQ9D2P8 170 aa12.07□□□□□ -0.48
Pkp4-202ENSMUST00000102754 Nsd1O88491 2588 aaKnown RBP12.07□□□□□ -0.48
Pkp4-202ENSMUST00000102754 Gm19935A0A1B0GSF9 52 aa12.07□□□□□ -0.48
Pkp4-202ENSMUST00000102754 SnurfQ9WU12 71 aa12.06□□□□□ -0.48
Pkp4-202ENSMUST00000102754 Gm9887F6RFI0 207 aa12.06□□□□□ -0.48
Pkp4-202ENSMUST00000102754 Sox16Q62247 57 aa12.06□□□□□ -0.48
Pkp4-202ENSMUST00000102754 A730009L09RikA0A1B0GS82 72 aa12.04□□□□□ -0.48
Pkp4-202ENSMUST00000102754 Ighv1-56A0A0A6YXG2 117 aa12.03□□□□□ -0.48
Pkp4-202ENSMUST00000102754 NipblQ6KCD5 2798 aaKnown RBP12.03□□□□□ -0.48
Pkp4-202ENSMUST00000102754 Krtap24-1G3X9A2 248 aa12.01□□□□□ -0.49
Retrieved 100 of 22,080 RNA–protein pairs in 53.5 ms