RNA–Protein interactions for RNA: ENSMUST00000087883.12

Col3a1-201, Transcript of Collagen alpha-1(III) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col3a1, Length 5,564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col3a1-201ENSMUST00000087883 Ighv2-5A0A0A6YY69 116 aa9.79□□□□□ -0.84
Col3a1-201ENSMUST00000087883 Fam19a3Q7TPG6 132 aa9.79□□□□□ -0.84
Col3a1-201ENSMUST00000087883 Gm10160F6Y577 67 aa9.78□□□□□ -0.84
Col3a1-201ENSMUST00000087883 A530084C06RikQ3UTW2 186 aa9.78□□□□□ -0.84
Col3a1-201ENSMUST00000087883 Msrb1Q9JLC3 116 aa9.77□□□□□ -0.85
Col3a1-201ENSMUST00000087883 Tns1E9Q0S6 1888 aaKnown RBP9.77□□□□□ -0.85
Col3a1-201ENSMUST00000087883 A730009L09RikA0A1B0GS82 72 aa9.77□□□□□ -0.85
Col3a1-201ENSMUST00000087883 1700018G05RikA0A1B0GSI2 66 aa9.77□□□□□ -0.85
Col3a1-201ENSMUST00000087883 Rps28P62858 69 aaKnown RBP9.77□□□□□ -0.85
Col3a1-201ENSMUST00000087883 Ly6g6cQ9Z1Q4 126 aa9.76□□□□□ -0.85
Col3a1-201ENSMUST00000087883 NbasE9Q411 2356 aa9.76□□□□□ -0.85
Col3a1-201ENSMUST00000087883 Kiaa1549Q68FD9 1940 aa9.74□□□□□ -0.85
Col3a1-201ENSMUST00000087883 Lrp4Q8VI56 1905 aa9.74□□□□□ -0.85
Col3a1-201ENSMUST00000087883 Chchd10Q7TNL9 138 aa9.74□□□□□ -0.85
Col3a1-201ENSMUST00000087883 OtoglF7A4A7 2325 aa9.73□□□□□ -0.85
Col3a1-201ENSMUST00000087883 Krtap16-1A2A5X5 502 aa9.73□□□□□ -0.85
Col3a1-201ENSMUST00000087883 AI854703Q8BIN3 203 aa9.73□□□□□ -0.85
Col3a1-201ENSMUST00000087883 Sostdc1Q9CQN4 206 aa9.73□□□□□ -0.85
Col3a1-201ENSMUST00000087883 Igkv8-27A0A0G2JF28 120 aa9.73□□□□□ -0.85
Col3a1-201ENSMUST00000087883 2310034G01RikA0A286YDL3 209 aa9.73□□□□□ -0.85
Col3a1-201ENSMUST00000087883 P01819 144 aa9.73□□□□□ -0.85
Col3a1-201ENSMUST00000087883 Ighv2-2A0A075B5P8 116 aa9.72□□□□□ -0.85
Col3a1-201ENSMUST00000087883 P01821 116 aa9.72□□□□□ -0.85
Col3a1-201ENSMUST00000087883 Myo9aQ8C170 2542 aa9.72□□□□□ -0.85
Col3a1-201ENSMUST00000087883 Gm9573F7C950 1606 aa9.72□□□□□ -0.85
Col3a1-201ENSMUST00000087883 Gm43218A0A0G2JGT0 114 aa9.71□□□□□ -0.85
Col3a1-201ENSMUST00000087883 Gm21886J3QJU9 214 aa9.7□□□□□ -0.86
Col3a1-201ENSMUST00000087883 PtprbB2RU80 1998 aa9.7□□□□□ -0.86
Col3a1-201ENSMUST00000087883 Gm12216A0A1W2P827 62 aa9.7□□□□□ -0.86
Col3a1-201ENSMUST00000087883 Gm17606F6ZL36 78 aa9.69□□□□□ -0.86
Col3a1-201ENSMUST00000087883 Golgb1E9PVZ8 3238 aa9.69□□□□□ -0.86
Col3a1-201ENSMUST00000087883 CrygaP04345 174 aa9.68□□□□□ -0.86
Col3a1-201ENSMUST00000087883 Gm44790A0A0N4SV91 103 aa9.67□□□□□ -0.86
Col3a1-201ENSMUST00000087883 BC067074F6RXI4 2391 aa9.67□□□□□ -0.86
Col3a1-201ENSMUST00000087883 Prr13Q9CQJ5 137 aa9.67□□□□□ -0.86
Col3a1-201ENSMUST00000087883 MobpQ9D2P8 170 aa9.66□□□□□ -0.86
Col3a1-201ENSMUST00000087883 Elof1P60003 83 aa9.66□□□□□ -0.86
Col3a1-201ENSMUST00000087883 AcacbE9Q4Z2 2448 aa9.65□□□□□ -0.86
Col3a1-201ENSMUST00000087883 Zfyve26Q5DU37 2529 aa9.65□□□□□ -0.86
Col3a1-201ENSMUST00000087883 Gm10642Q3TWM1 71 aa9.65□□□□□ -0.86
Col3a1-201ENSMUST00000087883 Flg2Q2VIS4 2362 aa9.65□□□□□ -0.87
Col3a1-201ENSMUST00000087883 Gm10999F6Q4M4 69 aa9.64□□□□□ -0.87
Col3a1-201ENSMUST00000087883 Defb10Q8R2I8 73 aa9.64□□□□□ -0.87
Col3a1-201ENSMUST00000087883 Limd2Q8BGB5 128 aa9.64□□□□□ -0.87
Col3a1-201ENSMUST00000087883 Dmac1Q9CQ00 111 aa9.62□□□□□ -0.87
Col3a1-201ENSMUST00000087883 Gm28374F6SG70 93 aa9.62□□□□□ -0.87
Col3a1-201ENSMUST00000087883 Gm11627A6PWP4 55 aa9.61□□□□□ -0.87
Col3a1-201ENSMUST00000087883 Defb50Q6TU36 73 aa9.61□□□□□ -0.87
Col3a1-201ENSMUST00000087883 A930002H24RikQ8C8Y3 163 aa9.61□□□□□ -0.87
Col3a1-201ENSMUST00000087883 Gm20661K7N787 53 aa9.61□□□□□ -0.87
Col3a1-201ENSMUST00000087883 Gm10770F7D043 238 aa9.6□□□□□ -0.87
Col3a1-201ENSMUST00000087883 7530416G11RikJ3QJX6 159 aa9.6□□□□□ -0.87
Col3a1-201ENSMUST00000087883 Gm10308Q9CVR5 141 aa9.58□□□□□ -0.88
Col3a1-201ENSMUST00000087883 E130208F15RikQ3UPV3 143 aa9.57□□□□□ -0.88
Col3a1-201ENSMUST00000087883 Gm17689B3GLJ4 109 aa9.56□□□□□ -0.88
Col3a1-201ENSMUST00000087883 Rpl37aP61514 92 aa9.56□□□□□ -0.88
Col3a1-201ENSMUST00000087883 AI606181Q8C7B9 129 aa9.55□□□□□ -0.88
Col3a1-201ENSMUST00000087883 Col27a1Q5QNQ9 1845 aa9.55□□□□□ -0.88
Col3a1-201ENSMUST00000087883 Srsf12Q8C8K3 266 aa9.55□□□□□ -0.88
Col3a1-201ENSMUST00000087883 Gm9903Q8C9Y8 129 aa9.55□□□□□ -0.88
Col3a1-201ENSMUST00000087883 Abca2P41234 2434 aa9.53□□□□□ -0.88
Col3a1-201ENSMUST00000087883 Rif1Q6PR54 2419 aaKnown RBP9.53□□□□□ -0.88
Col3a1-201ENSMUST00000087883 Gm3285A0A1W2P7U0 201 aa9.53□□□□□ -0.88
Col3a1-201ENSMUST00000087883 Coa5Q99M07 74 aa9.53□□□□□ -0.88
Col3a1-201ENSMUST00000087883 Gm16181B0V2H2 73 aa9.52□□□□□ -0.89
Col3a1-201ENSMUST00000087883 AplnQ9R0R4 77 aa9.52□□□□□ -0.89
Col3a1-201ENSMUST00000087883 Phf5aP83870 110 aaKnown RBP9.51□□□□□ -0.89
Col3a1-201ENSMUST00000087883 Defb1P56386 69 aa9.51□□□□□ -0.89
Col3a1-201ENSMUST00000087883 Snhg11Q4G0K9 87 aa9.51□□□□□ -0.89
Col3a1-201ENSMUST00000087883 Ankhd1E9PUR0 2548 aaKnown RBP9.49□□□□□ -0.89
Col3a1-201ENSMUST00000087883 Cdc42se1Q8BHL7 80 aa9.49□□□□□ -0.89
Col3a1-201ENSMUST00000087883 Mp68P56379 58 aa9.49□□□□□ -0.89
Col3a1-201ENSMUST00000087883 Gm26661M0QWV4 156 aa9.48□□□□□ -0.89
Col3a1-201ENSMUST00000087883 4930507D05RikQ8C9C9 103 aa9.48□□□□□ -0.89
Col3a1-201ENSMUST00000087883 Hivep2Q3UHF7 2430 aa9.47□□□□□ -0.89
Col3a1-201ENSMUST00000087883 Gm10772F7AIG4 85 aa9.47□□□□□ -0.89
Col3a1-201ENSMUST00000087883 Pkd1l2Q7TN88 2461 aa9.46□□□□□ -0.89
Col3a1-201ENSMUST00000087883 Q8BT88 171 aa9.46□□□□□ -0.89
Col3a1-201ENSMUST00000087883 Gpr15lA0A0B4J1N3 78 aa9.45□□□□□ -0.9
Col3a1-201ENSMUST00000087883 Znf414Q9DCK4 299 aa9.45□□□□□ -0.9
Col3a1-201ENSMUST00000087883 Gm5617Q91VN2 117 aa9.45□□□□□ -0.9
Col3a1-201ENSMUST00000087883 Prol1E9PYQ4 312 aa9.44□□□□□ -0.9
Col3a1-201ENSMUST00000087883 Spaca4Q80ZQ0 127 aa9.44□□□□□ -0.9
Col3a1-201ENSMUST00000087883 Nav3Q80TN7 2359 aa9.44□□□□□ -0.9
Col3a1-201ENSMUST00000087883 Lrrk2Q5S006 2527 aa9.43□□□□□ -0.9
Col3a1-201ENSMUST00000087883 Psors1c2Q80ZC9 134 aa9.42□□□□□ -0.9
Col3a1-201ENSMUST00000087883 Eif4ebp3Q80VV3 101 aa9.42□□□□□ -0.9
Col3a1-201ENSMUST00000087883 Krtap26-1Q9D7N2 215 aa9.41□□□□□ -0.9
Col3a1-201ENSMUST00000087883 Hcfc1Q61191 2045 aaKnown RBP9.41□□□□□ -0.9
Col3a1-201ENSMUST00000087883 Q8BGJ3 129 aa9.4□□□□□ -0.9
Col3a1-201ENSMUST00000087883 Phxr4P15974 95 aa9.39□□□□□ -0.91
Col3a1-201ENSMUST00000087883 Fam168bQ80XQ8 194 aa9.39□□□□□ -0.91
Col3a1-201ENSMUST00000087883 Col4a2P08122 1707 aa9.38□□□□□ -0.91
Col3a1-201ENSMUST00000087883 Gm27235Q3UW50 83 aa9.38□□□□□ -0.91
Col3a1-201ENSMUST00000087883 Ttc28Q80XJ3 2450 aa9.38□□□□□ -0.91
Col3a1-201ENSMUST00000087883 Phxr5P08399 672 aa9.38□□□□□ -0.91
Col3a1-201ENSMUST00000087883 Krtap24-1G3X9A2 248 aa9.37□□□□□ -0.91
Col3a1-201ENSMUST00000087883 Gm10837Q3UTT8 145 aa9.37□□□□□ -0.91
Col3a1-201ENSMUST00000087883 Col5a1O88207 1838 aa9.37□□□□□ -0.91
Col3a1-201ENSMUST00000087883 Piezo2Q8CD54 2822 aa9.36□□□□□ -0.91
Retrieved 100 of 22,080 RNA–protein pairs in 73.3 ms