RNA–Protein interactions for RNA: ENSMUST00000035935.8

Ccdc40-201, Transcript of Coiled-coil domain-containing protein 40, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ccdc40, Length 4,979 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40-201ENSMUST00000035935 Igkv3-3A0A140T8Q0 119 aa7.15□□□□□ -1.26
Ccdc40-201ENSMUST00000035935 Gm16181B0V2H2 73 aa7.15□□□□□ -1.26
Ccdc40-201ENSMUST00000035935 ScxQ64124 207 aa7.15□□□□□ -1.27
Ccdc40-201ENSMUST00000035935 PcntP48725 2898 aa7.15□□□□□ -1.27
Ccdc40-201ENSMUST00000035935 Ighv2-5A0A0A6YY69 116 aa7.15□□□□□ -1.27
Ccdc40-201ENSMUST00000035935 Krtap24-1G3X9A2 248 aa7.15□□□□□ -1.27
Ccdc40-201ENSMUST00000035935 Ep400Q8CHI8 3072 aaKnown RBP7.14□□□□□ -1.27
Ccdc40-201ENSMUST00000035935 Sostdc1Q9CQN4 206 aa7.13□□□□□ -1.27
Ccdc40-201ENSMUST00000035935 Gm11565A2A4M7 156 aa7.13□□□□□ -1.27
Ccdc40-201ENSMUST00000035935 Igkv1-110A0A0B4J1I0 119 aa7.12□□□□□ -1.27
Ccdc40-201ENSMUST00000035935 Gm10772F7AIG4 85 aa7.11□□□□□ -1.27
Ccdc40-201ENSMUST00000035935 E130208F15RikQ3UPV3 143 aa7.11□□□□□ -1.27
Ccdc40-201ENSMUST00000035935 Bahcc1Q3UHR0 2643 aa7.1□□□□□ -1.27
Ccdc40-201ENSMUST00000035935 Gm11627A6PWP4 55 aa7.1□□□□□ -1.27
Ccdc40-201ENSMUST00000035935 Wfdc13Q5DQQ6 81 aa7.1□□□□□ -1.27
Ccdc40-201ENSMUST00000035935 Q9DAA7 145 aa7.1□□□□□ -1.27
Ccdc40-201ENSMUST00000035935 Serp1Q9Z1W5 66 aa7.1□□□□□ -1.27
Ccdc40-201ENSMUST00000035935 Cd164Q9R0L9 197 aa7.09□□□□□ -1.27
Ccdc40-201ENSMUST00000035935 Ighv2-2A0A075B5P8 116 aa7.09□□□□□ -1.27
Ccdc40-201ENSMUST00000035935 P01821 116 aa7.09□□□□□ -1.27
Ccdc40-201ENSMUST00000035935 UqcrqQ9CQ69 82 aa7.09□□□□□ -1.27
Ccdc40-201ENSMUST00000035935 Ndufb1P0DN34 57 aa7.09□□□□□ -1.28
Ccdc40-201ENSMUST00000035935 CenpfE9Q3P4 2997 aaKnown RBP7.08□□□□□ -1.28
Ccdc40-201ENSMUST00000035935 A730009L09RikA0A1B0GS82 72 aa7.08□□□□□ -1.28
Ccdc40-201ENSMUST00000035935 Abca12E9Q876 2595 aa7.08□□□□□ -1.28
Ccdc40-201ENSMUST00000035935 Setd2E9Q5F9 2537 aa7.07□□□□□ -1.28
Ccdc40-201ENSMUST00000035935 Hcfc1Q61191 2045 aaKnown RBP7.07□□□□□ -1.28
Ccdc40-201ENSMUST00000035935 Zfp462B1AWL2 2495 aaKnown RBP7.06□□□□□ -1.28
Ccdc40-201ENSMUST00000035935 UtrnE9Q6R7 3430 aa7.06□□□□□ -1.28
Ccdc40-201ENSMUST00000035935 Chchd10Q7TNL9 138 aa7.06□□□□□ -1.28
Ccdc40-201ENSMUST00000035935 Lama2Q60675 3118 aaKnown RBP7.06□□□□□ -1.28
Ccdc40-201ENSMUST00000035935 H2al1bA0A087WP11 105 aa7.05□□□□□ -1.28
Ccdc40-201ENSMUST00000035935 Elof1P60003 83 aa7.05□□□□□ -1.28
Ccdc40-201ENSMUST00000035935 MtorQ9JLN9 2549 aa7.05□□□□□ -1.28
Ccdc40-201ENSMUST00000035935 Sec61gP60060 68 aa7.05□□□□□ -1.28
Ccdc40-201ENSMUST00000035935 Wfdc6bF6ULY1 148 aa7.05□□□□□ -1.28
Ccdc40-201ENSMUST00000035935 Msrb1Q9JLC3 116 aa7.05□□□□□ -1.28
Ccdc40-201ENSMUST00000035935 Cox6a2P43023 97 aa7.04□□□□□ -1.28
Ccdc40-201ENSMUST00000035935 Igkv3-12A0A140T8P0 119 aa7.04□□□□□ -1.28
Ccdc40-201ENSMUST00000035935 Dmac1Q9CQ00 111 aa7.04□□□□□ -1.28
Ccdc40-201ENSMUST00000035935 Snhg11Q4G0K9 87 aa7.04□□□□□ -1.28
Ccdc40-201ENSMUST00000035935 H2al1aQ5M8Q2 105 aa7.04□□□□□ -1.28
Ccdc40-201ENSMUST00000035935 H2al1eQ810S6 105 aa7.04□□□□□ -1.28
Ccdc40-201ENSMUST00000035935 Igkv8-30A0A140T8M3 121 aa7.03□□□□□ -1.28
Ccdc40-201ENSMUST00000035935 Gm10337F7DEP7 55 aa7.03□□□□□ -1.28
Ccdc40-201ENSMUST00000035935 C130032M10RikQ8C888 123 aa7.03□□□□□ -1.28
Ccdc40-201ENSMUST00000035935 Unc79Q0KK59 2596 aa7.03□□□□□ -1.28
Ccdc40-201ENSMUST00000035935 4930519P11RikQ9CUJ8 166 aa7.02□□□□□ -1.29
Ccdc40-201ENSMUST00000035935 Gm28230A0A0A0MQ91 144 aa7.01□□□□□ -1.29
Ccdc40-201ENSMUST00000035935 6430550D23RikE9Q1X6 194 aa7.01□□□□□ -1.29
Ccdc40-201ENSMUST00000035935 4930518I15RikQ3V2W7 57 aa7.01□□□□□ -1.29
Ccdc40-201ENSMUST00000035935 Sprr1bQ62267 153 aa7.01□□□□□ -1.29
Ccdc40-201ENSMUST00000035935 1700074P13RikQ9D9G7 251 aa7.01□□□□□ -1.29
Ccdc40-201ENSMUST00000035935 Spata3Q9D9T6 193 aa7.01□□□□□ -1.29
Ccdc40-201ENSMUST00000035935 AI854703Q8BIN3 203 aa7.01□□□□□ -1.29
Ccdc40-201ENSMUST00000035935 Igkv8-27A0A0G2JF28 120 aa7□□□□□ -1.29
Ccdc40-201ENSMUST00000035935 Adm2Q7TNK8 150 aa7□□□□□ -1.29
Ccdc40-201ENSMUST00000035935 Lypd5Q9D7Z7 256 aa7□□□□□ -1.29
Ccdc40-201ENSMUST00000035935 Zfp292Q9Z2U2 2698 aa7□□□□□ -1.29
Ccdc40-201ENSMUST00000035935 2310034G01RikA0A286YDL3 209 aa6.99□□□□□ -1.29
Ccdc40-201ENSMUST00000035935 Fam19a3Q7TPG6 132 aa6.99□□□□□ -1.29
Ccdc40-201ENSMUST00000035935 Prol1E9PYQ4 312 aa6.99□□□□□ -1.29
Ccdc40-201ENSMUST00000035935 Mrpl34Q99N91 92 aa6.99□□□□□ -1.29
Ccdc40-201ENSMUST00000035935 Ly6g6cQ9Z1Q4 126 aa6.98□□□□□ -1.29
Ccdc40-201ENSMUST00000035935 Epg5Q80TA9 2572 aa6.98□□□□□ -1.29
Ccdc40-201ENSMUST00000035935 Defb50Q6TU36 73 aa6.98□□□□□ -1.29
Ccdc40-201ENSMUST00000035935 Gm10308Q9CVR5 141 aa6.98□□□□□ -1.29
Ccdc40-201ENSMUST00000035935 9230102O04RikA2ASX7 82 aa6.97□□□□□ -1.29
Ccdc40-201ENSMUST00000035935 Apoc4Q61268 124 aa6.97□□□□□ -1.29
Ccdc40-201ENSMUST00000035935 Myo18bE9PV66 2605 aa6.97□□□□□ -1.29
Ccdc40-201ENSMUST00000035935 Coa6Q8BGD8 79 aa6.97□□□□□ -1.29
Ccdc40-201ENSMUST00000035935 Defb37Q7TMD2 62 aa6.96□□□□□ -1.29
Ccdc40-201ENSMUST00000035935 Dnah12Q3V0Q1 3086 aa6.96□□□□□ -1.3
Ccdc40-201ENSMUST00000035935 AW011738F6S7Q2 159 aa6.96□□□□□ -1.3
Ccdc40-201ENSMUST00000035935 Gm10267M0QWD8 85 aa6.96□□□□□ -1.3
Ccdc40-201ENSMUST00000035935 FlnbQ80X90 2602 aaKnown RBP6.95□□□□□ -1.3
Ccdc40-201ENSMUST00000035935 Krtap16-1A2A5X5 502 aa6.95□□□□□ -1.3
Ccdc40-201ENSMUST00000035935 Gm28374F6SG70 93 aa6.95□□□□□ -1.3
Ccdc40-201ENSMUST00000035935 Gm10570F6VB42 170 aa6.94□□□□□ -1.3
Ccdc40-201ENSMUST00000035935 Rps28P62858 69 aaKnown RBP6.94□□□□□ -1.3
Ccdc40-201ENSMUST00000035935 P84750 121 aa6.94□□□□□ -1.3
Ccdc40-201ENSMUST00000035935 Gm10837Q3UTT8 145 aa6.94□□□□□ -1.3
Ccdc40-201ENSMUST00000035935 Cep350E9Q309 3095 aa6.93□□□□□ -1.3
Ccdc40-201ENSMUST00000035935 1600014C23RikQ9DAX4 101 aa6.93□□□□□ -1.3
Ccdc40-201ENSMUST00000035935 Igkv8-28A0A0G2JE47 121 aa6.93□□□□□ -1.3
Ccdc40-201ENSMUST00000035935 Ndufs5Q99LY9 106 aa6.93□□□□□ -1.3
Ccdc40-201ENSMUST00000035935 SnurfQ9WU12 71 aa6.92□□□□□ -1.3
Ccdc40-201ENSMUST00000035935 Reg3aO09037 175 aa6.91□□□□□ -1.3
Ccdc40-201ENSMUST00000035935 1700018G05RikA0A1B0GSI2 66 aa6.91□□□□□ -1.3
Ccdc40-201ENSMUST00000035935 Sprr4Q8CGN8 76 aa6.91□□□□□ -1.3
Ccdc40-201ENSMUST00000035935 Krtap11-1E9Q2E9 183 aa6.9□□□□□ -1.3
Ccdc40-201ENSMUST00000035935 Eif4ebp3Q80VV3 101 aa6.9□□□□□ -1.3
Ccdc40-201ENSMUST00000035935 Gm10770F7D043 238 aa6.9□□□□□ -1.3
Ccdc40-201ENSMUST00000035935 Gm21886J3QJU9 214 aa6.9□□□□□ -1.3
Ccdc40-201ENSMUST00000035935 AplnQ9R0R4 77 aa6.9□□□□□ -1.3
Ccdc40-201ENSMUST00000035935 AY074887Q8R5F9 132 aa6.9□□□□□ -1.31
Ccdc40-201ENSMUST00000035935 Defb11Q8R2I7 77 aa6.89□□□□□ -1.31
Ccdc40-201ENSMUST00000035935 TrioQ0KL02 3102 aa6.89□□□□□ -1.31
Ccdc40-201ENSMUST00000035935 Ankrd11E9Q4F7 2643 aa6.87□□□□□ -1.31
Ccdc40-201ENSMUST00000035935 Znf414Q9DCK4 299 aa6.87□□□□□ -1.31
Retrieved 100 of 22,080 RNA–protein pairs in 14.9 ms