RNA–Protein interactions for RNA: ENSMUST00000035283.10

Nup88-201, Transcript of Nuclear pore complex protein Nup88, mousemouse

TSL 1 (best) BASIC

Gene Nup88, Length 2,450 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-201ENSMUST00000035283 Tmem254aP0DN89 123 aa9.24□□□□□ -0.93
Nup88-201ENSMUST00000035283 Tmem254bP0DN90 123 aa9.24□□□□□ -0.93
Nup88-201ENSMUST00000035283 Tmem254cP0DN91 123 aa9.24□□□□□ -0.93
Nup88-201ENSMUST00000035283 Tmem243B2RVB9 118 aa9.23□□□□□ -0.93
Nup88-201ENSMUST00000035283 Ly6c2P0CW03 131 aa9.23□□□□□ -0.93
Nup88-201ENSMUST00000035283 Sprr1bQ62267 153 aa9.23□□□□□ -0.93
Nup88-201ENSMUST00000035283 Fam19a1Q7TPG8 133 aa9.23□□□□□ -0.93
Nup88-201ENSMUST00000035283 Tmem223Q9CQE2 199 aaKnown RBP9.22□□□□□ -0.93
Nup88-201ENSMUST00000035283 Cd99Q8VCN6 175 aa9.22□□□□□ -0.93
Nup88-201ENSMUST00000035283 Wfdc12Q9JHY3 85 aa9.22□□□□□ -0.93
Nup88-201ENSMUST00000035283 Gm9903Q8C9Y8 129 aa9.21□□□□□ -0.93
Nup88-201ENSMUST00000035283 Igkv8-21A0A140T8P7 120 aa9.21□□□□□ -0.94
Nup88-201ENSMUST00000035283 PrcdQ00LT2 53 aa9.21□□□□□ -0.94
Nup88-201ENSMUST00000035283 EnhoQ8K1D8 76 aa9.21□□□□□ -0.94
Nup88-201ENSMUST00000035283 Trav9n-4A0A075B631 113 aa9.2□□□□□ -0.94
Nup88-201ENSMUST00000035283 Igkv4-58A0A0G2JGI6 119 aa9.2□□□□□ -0.94
Nup88-201ENSMUST00000035283 MplkipQ9D011 178 aa9.2□□□□□ -0.94
Nup88-201ENSMUST00000035283 Ube2d4D3YUH6 135 aa9.19□□□□□ -0.94
Nup88-201ENSMUST00000035283 Defa20Q45VN2 95 aa9.19□□□□□ -0.94
Nup88-201ENSMUST00000035283 Fam229bQ8CF36 80 aa9.19□□□□□ -0.94
Nup88-201ENSMUST00000035283 Ighv10-3A0A075B5T6 119 aa9.19□□□□□ -0.94
Nup88-201ENSMUST00000035283 Igkv4-61A0A0G2JH00 117 aa9.19□□□□□ -0.94
Nup88-201ENSMUST00000035283 Tex15F8VPN2 2785 aa9.18□□□□□ -0.94
Nup88-201ENSMUST00000035283 Hivep3A2A884 2348 aa9.18□□□□□ -0.94
Nup88-201ENSMUST00000035283 Ighv2-9A0A075B5Q5 116 aa9.17□□□□□ -0.94
Nup88-201ENSMUST00000035283 Igkv8-27A0A0G2JF28 120 aa9.17□□□□□ -0.94
Nup88-201ENSMUST00000035283 Igkv8-30A0A140T8M3 121 aa9.17□□□□□ -0.94
Nup88-201ENSMUST00000035283 Gm10518F6UQQ9 182 aa9.17□□□□□ -0.94
Nup88-201ENSMUST00000035283 Defa23Q5G866 93 aa9.17□□□□□ -0.94
Nup88-201ENSMUST00000035283 TrrapQ80YV3 2565 aaKnown RBP9.17□□□□□ -0.94
Nup88-201ENSMUST00000035283 Ighv1-59A0A0A6YXE0 117 aa9.17□□□□□ -0.94
Nup88-201ENSMUST00000035283 Defb2P82020 71 aa9.17□□□□□ -0.94
Nup88-201ENSMUST00000035283 Tmem86bQ497J1 226 aa9.17□□□□□ -0.94
Nup88-201ENSMUST00000035283 Gm10308Q9CVR5 141 aa9.16□□□□□ -0.94
Nup88-201ENSMUST00000035283 P01819 144 aa9.16□□□□□ -0.94
Nup88-201ENSMUST00000035283 CnbpP53996 178 aaKnown RBP9.16□□□□□ -0.94
Nup88-201ENSMUST00000035283 Leap2Q91V13 76 aa9.16□□□□□ -0.94
Nup88-201ENSMUST00000035283 Ormdl1Q921I0 153 aa9.16□□□□□ -0.94
Nup88-201ENSMUST00000035283 Igkv8-16A0A0G2JDG9 121 aa9.15□□□□□ -0.94
Nup88-201ENSMUST00000035283 Trbv13-2A0A140T8N6 113 aa9.15□□□□□ -0.94
Nup88-201ENSMUST00000035283 Tcl1b3P56842 122 aa9.14□□□□□ -0.95
Nup88-201ENSMUST00000035283 Tmem258P61166 79 aa9.14□□□□□ -0.95
Nup88-201ENSMUST00000035283 Igkv8-26A0A075B5N5 123 aa9.13□□□□□ -0.95
Nup88-201ENSMUST00000035283 Rps28P62858 69 aaKnown RBP9.13□□□□□ -0.95
Nup88-201ENSMUST00000035283 Reg3dQ9QUS9 175 aa9.13□□□□□ -0.95
Nup88-201ENSMUST00000035283 Smlr1J3QMJ4 66 aa9.12□□□□□ -0.95
Nup88-201ENSMUST00000035283 Ubl5Q9EPV8 73 aa9.12□□□□□ -0.95
Nup88-201ENSMUST00000035283 Igkv8-24A0A140T8P5 121 aa9.12□□□□□ -0.95
Nup88-201ENSMUST00000035283 Gm3250E9Q1M3 230 aa9.12□□□□□ -0.95
Nup88-201ENSMUST00000035283 Krtap11-1E9Q2E9 183 aa9.12□□□□□ -0.95
Nup88-201ENSMUST00000035283 Gm9805F6YK59 57 aa9.12□□□□□ -0.95
Nup88-201ENSMUST00000035283 E130218I03RikA0A0U1RNU5 63 aa9.11□□□□□ -0.95
Nup88-201ENSMUST00000035283 Gm9767G3X930 207 aa9.11□□□□□ -0.95
Nup88-201ENSMUST00000035283 Cox7bP56393 80 aa9.11□□□□□ -0.95
Nup88-201ENSMUST00000035283 B230307C23RikQ8BLB2 64 aa9.11□□□□□ -0.95
Nup88-201ENSMUST00000035283 Igkv3-9A0A140T8P4 119 aa9.1□□□□□ -0.95
Nup88-201ENSMUST00000035283 4930556J24RikQ9D4U7 146 aa9.1□□□□□ -0.95
Nup88-201ENSMUST00000035283 Gm19935A0A1B0GSF9 52 aa9.1□□□□□ -0.95
Nup88-201ENSMUST00000035283 GhrhP16043 103 aa9.1□□□□□ -0.95
Nup88-201ENSMUST00000035283 Higd2aQ9CQJ1 106 aa9.1□□□□□ -0.95
Nup88-201ENSMUST00000035283 Lamtor3O88653 124 aa9.09□□□□□ -0.95
Nup88-201ENSMUST00000035283 CrygdP04342 174 aa9.09□□□□□ -0.95
Nup88-201ENSMUST00000035283 Mrpl52Q9D0Y8 121 aa9.09□□□□□ -0.95
Nup88-201ENSMUST00000035283 Gm17689B3GLJ4 109 aa9.08□□□□□ -0.96
Nup88-201ENSMUST00000035283 Samd13D3YUG0 102 aa9.08□□□□□ -0.96
Nup88-201ENSMUST00000035283 Psors1c2Q80ZC9 134 aa9.08□□□□□ -0.96
Nup88-201ENSMUST00000035283 Ighv10-1A0A0B4J1J6 119 aa9.07□□□□□ -0.96
Nup88-201ENSMUST00000035283 Krtap24-1G3X9A2 248 aa9.07□□□□□ -0.96
Nup88-201ENSMUST00000035283 Fam19a3Q7TPG6 132 aa9.07□□□□□ -0.96
Nup88-201ENSMUST00000035283 Msrb1Q9JLC3 116 aa9.07□□□□□ -0.96
Nup88-201ENSMUST00000035283 Mast4Q811L6 2618 aa9.07□□□□□ -0.96
Nup88-201ENSMUST00000035283 Igkv1-110A0A0B4J1I0 119 aa9.07□□□□□ -0.96
Nup88-201ENSMUST00000035283 D730001G18RikA0A087WQU7 115 aa9.06□□□□□ -0.96
Nup88-201ENSMUST00000035283 Inafm2A0A1L1STD6 152 aa9.06□□□□□ -0.96
Nup88-201ENSMUST00000035283 A0A286YCN5 57 aa9.06□□□□□ -0.96
Nup88-201ENSMUST00000035283 Nbeal2Q6ZQA0 2742 aa9.06□□□□□ -0.96
Nup88-201ENSMUST00000035283 A730071L15RikQ8C4X0 137 aa9.05□□□□□ -0.96
Nup88-201ENSMUST00000035283 Q8R092 253 aa9.05□□□□□ -0.96
Nup88-201ENSMUST00000035283 Gm3233E9Q2H5 230 aa9.05□□□□□ -0.96
Nup88-201ENSMUST00000035283 Gm10770F7D043 238 aa9.04□□□□□ -0.96
Nup88-201ENSMUST00000035283 9530003J23RikQ8BM26 151 aa9.04□□□□□ -0.96
Nup88-201ENSMUST00000035283 BikO70337 150 aa9.04□□□□□ -0.96
Nup88-201ENSMUST00000035283 AY074887Q8R5F9 132 aa9.04□□□□□ -0.96
Nup88-201ENSMUST00000035283 Brk1Q91VR8 75 aa9.04□□□□□ -0.96
Nup88-201ENSMUST00000035283 Dad1P61804 113 aa9.03□□□□□ -0.96
Nup88-201ENSMUST00000035283 Defb37Q7TMD2 62 aa9.03□□□□□ -0.96
Nup88-201ENSMUST00000035283 Fam19a5Q91WE9 132 aa9.03□□□□□ -0.96
Nup88-201ENSMUST00000035283 Ighv2-5A0A0A6YY69 116 aa9.02□□□□□ -0.97
Nup88-201ENSMUST00000035283 A830005F24RikQ8BRT5 167 aa9.02□□□□□ -0.97
Nup88-201ENSMUST00000035283 SnurfQ9WU12 71 aa9.02□□□□□ -0.97
Nup88-201ENSMUST00000035283 ApcQ61315 2845 aa9.02□□□□□ -0.97
Nup88-201ENSMUST00000035283 Ighv13-2A0A0A6YWN3 119 aa9.02□□□□□ -0.97
Nup88-201ENSMUST00000035283 E130114P18RikF6S0S7 154 aa9.02□□□□□ -0.97
Nup88-201ENSMUST00000035283 Rbm3O89086 153 aaKnown RBP9□□□□□ -0.97
Nup88-201ENSMUST00000035283 Igkv1-88A0A140T8N1 120 aa9□□□□□ -0.97
Nup88-201ENSMUST00000035283 2310034G01RikA0A286YDL3 209 aa9□□□□□ -0.97
Nup88-201ENSMUST00000035283 Tcl1b5P56845 121 aa8.99□□□□□ -0.97
Nup88-201ENSMUST00000035283 CrygfQ9CXV3 174 aa8.99□□□□□ -0.97
Nup88-201ENSMUST00000035283 Igkv8-34A0A0G2JDU0 121 aa8.98□□□□□ -0.97
Nup88-201ENSMUST00000035283 Gm11213A0A1B0GR83 88 aa8.98□□□□□ -0.97
Retrieved 100 of 22,080 RNA–protein pairs in 12.3 ms